RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 TSPEARQ8WU66 669 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 ACSBG1Q96GR2 724 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 WNT10AQ9GZT5 417 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 FAM204AQ9H8W3 233 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 ATP8A2Q9NTI2 1148 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 STXBP5LQ9Y2K9 1186 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 SPTBN5Q9NRC6 3674 aaKnown RBP3.83□□□□□ -1.8
SMC6-208ENST00000481708 WNT9AO14904 365 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 PGM3O95394 542 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 TNFRSF6BO95407 300 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 FLT3P36888 993 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 HSPA7P48741 367 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 MAPK10P53779 464 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 FAM110CQ1W6H9 321 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 RGL3Q3MIN7 710 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 TOR2AQ5JU69 321 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 FKBP15Q5T1M5 1219 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 ZNF787Q6DD87 383 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 FAAH2Q6GMR7 532 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 ZC3H7AQ8IWR0 971 aaKnown RBP3.83□□□□□ -1.8
SMC6-208ENST00000481708 MRPL41Q8IXM3 137 aaKnown RBP3.83□□□□□ -1.8
SMC6-208ENST00000481708 CCDC144CPQ8IYA2 1237 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 NDUFAF2Q8N183 169 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 EFHBQ8N7U6 833 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 WDR18Q9BV38 432 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 ZDHHC5Q9C0B5 715 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 BRD9Q9H8M2 597 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 KRT82Q9NSB4 513 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 LRRC14BA6NHZ5 514 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 TSPY2A6NKD2 308 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 KDM1AO60341 852 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 WISP1O95388 367 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 TSPY3P0CV98 308 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 TSPY8P0CW00 308 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 TSPY1Q01534 308 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 NEXNQ0ZGT2 675 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 INF2Q27J81 1249 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 KIF4BQ2VIQ3 1234 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 ANGEL2Q5VTE6 544 aaKnown RBP3.83□□□□□ -1.8
SMC6-208ENST00000481708 MAEAQ7L5Y9 396 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 HERC6Q8IVU3 1022 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 UBASH3BQ8TF42 649 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 LRTOMTQ8WZ04 291 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 HTRA1Q92743 480 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 IRF7Q92985 503 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 MAP3K14Q99558 947 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 QRSL1Q9H0R6 528 aaKnown RBP3.83□□□□□ -1.8
SMC6-208ENST00000481708 ARFGAP3Q9NP61 516 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 DNAJC28Q9NX36 388 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 STAP2Q9UGK3 403 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 TMPRSS11EQ9UL52 423 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 GBF1Q92538 1859 aa3.83□□□□□ -1.8
SMC6-208ENST00000481708 SOS1Q07889 1333 aaPredicted RBP3.82□□□□□ -1.8
SMC6-208ENST00000481708 A0A1W2PPC4 97 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 POM121BA6NF01 834 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 MASP2O00187 686 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 CLEC3AO75596 197 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 ARIH2O95376 493 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 CELA2BP08218 269 aaPredicted RBP3.82□□□□□ -1.8
SMC6-208ENST00000481708 ACTN2P35609 894 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 KCNJ6P48051 423 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 TDO2P48775 406 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 PDE1CQ14123 709 aaPredicted RBP3.82□□□□□ -1.8
SMC6-208ENST00000481708 UAP1L1Q3KQV9 507 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 ZBTB41Q5SVQ8 909 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 DDX53Q86TM3 631 aaKnown RBP3.82□□□□□ -1.8
SMC6-208ENST00000481708 FIBCD1Q8N539 461 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 DDX54Q8TDD1 881 aaKnown RBP3.82□□□□□ -1.8
SMC6-208ENST00000481708 USP13Q92995 863 aaPredicted RBP3.82□□□□□ -1.8
SMC6-208ENST00000481708 DCP1AQ9NPI6 582 aaPredicted RBP3.82□□□□□ -1.8
SMC6-208ENST00000481708 TBC1D29Q9UFV1 150 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 MRFAP1Q9Y605 127 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 ITIH6Q6UXX5 1313 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 ZNF561-AS1K7EIQ3 104 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 BCRP11274 1271 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 CALRP27797 417 aaKnown RBP3.82□□□□□ -1.8
SMC6-208ENST00000481708 HOXC9P31274 260 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 GMPRP36959 345 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 JAM2P57087 298 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 RAB1AP62820 205 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 KIF23Q02241 960 aaPredicted RBP3.82□□□□□ -1.8
SMC6-208ENST00000481708 IFIT5Q13325 482 aaKnown RBP3.82□□□□□ -1.8
SMC6-208ENST00000481708 SMAD1Q15797 465 aaKnown RBP3.82□□□□□ -1.8
SMC6-208ENST00000481708 DPY19L1Q2PZI1 675 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 BBS9Q3SYG4 887 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 PITRM1Q5JRX3 1037 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 LBX2Q6XYB7 198 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 HDXQ7Z353 690 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 NOSTRINQ8IVI9 506 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 CHST13Q8NET6 341 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 FLCNQ8NFG4 579 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 OR2I1PQ8NGU4 316 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 SSH3Q8TE77 659 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 CREB3L4Q8TEY5 395 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 XAGE3Q8WTP9 111 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 ZSWIM5Q9P217 1185 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 PPP1R9AQ9ULJ8 1098 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 LRCH1Q9Y2L9 728 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 PCDHGB5Q9Y5G0 923 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 DENND4AQ7Z401 1863 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms