RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 CAPN7Q9Y6W3 813 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 TRIM49BA6NDI0 452 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 KPNA7A9QM74 516 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 CCDC15Q0P6D6 951 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 KIRREL3Q8IZU9 778 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 CHMP6Q96FZ7 201 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 MMTAG2Q9BU76 263 aaKnown RBP10.04□□□□□ -0.8
GARNL3-216ENST00000481242 PARD6BQ9BYG5 372 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 TRIM54Q9BYV2 358 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 TMEM247A6NEH6 219 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 FAM187AA6NFU0 413 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 CREB3O43889 395 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 FKBP1AP62942 108 aaKnown RBP10.04□□□□□ -0.8
GARNL3-216ENST00000481242 TMED2Q15363 201 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 TMTC4Q5T4D3 741 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 SHC4Q6S5L8 630 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 APLFQ8IW19 511 aaPredicted RBP10.04□□□□□ -0.8
GARNL3-216ENST00000481242 ZBTB18Q99592 522 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 STK33Q9BYT3 514 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 ACTR5Q9H9F9 607 aaPredicted RBP10.04□□□□□ -0.8
GARNL3-216ENST00000481242 SALL1Q9NSC2 1324 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 CLTAP09496 248 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 RPS6P62753 249 aaKnown RBP10.04□□□□□ -0.8
GARNL3-216ENST00000481242 E2F5Q15329 346 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 CFAP61Q8NHU2 1237 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 ASAP3Q8TDY4 903 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 NUP85Q9BW27 656 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 EPB41L4AQ9HCS5 686 aaPredicted RBP10.04□□□□□ -0.8
GARNL3-216ENST00000481242 RIMS1Q86UR5 1692 aaKnown RBP10.04□□□□□ -0.8
GARNL3-216ENST00000481242 RTN2O75298 545 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 KRT17Q04695 432 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 BFSP2Q13515 415 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 ZNF235Q14590 738 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 DEFB132Q7Z7B7 95 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 DPF2Q92785 391 aa10.04□□□□□ -0.8
GARNL3-216ENST00000481242 FAM205AQ6ZU69 1335 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 SSU72P8A0A1W2PR75 194 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 MANSC4A6NHS7 340 aaPredicted RBP10.03□□□□□ -0.8
GARNL3-216ENST00000481242 DCDC2CA8MYV0 355 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 TMCC1O94876 653 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 CYP11B2P19099 503 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 CLCN6P51797 869 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 ST8SIA6P61647 398 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 NCOA4Q13772 614 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 ATF7IP2Q5U623 682 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 TRAPPC11Q7Z392 1133 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 KCNH7Q9NS40 1196 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 APEX2Q9UBZ4 518 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 TMX2Q9Y320 296 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 CNTNAP5Q8WYK1 1306 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 STRNO43815 780 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 PALMO75781 387 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 IL1R1P14778 569 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 ADORA2BP29275 332 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 ATP1A2P50993 1020 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 SKIV2LQ15477 1246 aaKnown RBP10.03□□□□□ -0.8
GARNL3-216ENST00000481242 ANO4Q32M45 955 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 ZNF677Q86XU0 584 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 ADSSL1Q8N142 457 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 ARHGAP18Q8N392 663 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 TTC8Q8TAM2 541 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 SPON2Q9BUD6 331 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 SUN2Q9UH99 717 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 LIMA1Q9UHB6 759 aaKnown RBP10.03□□□□□ -0.8
GARNL3-216ENST00000481242 HEY1Q9Y5J3 304 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 SNX9Q9Y5X1 595 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 NEURL4Q96JN8 1562 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 CFAP69A5D8W1 941 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 GOLGA8MH3BSY2 632 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 NMT1P30419 496 aaKnown RBP10.03□□□□□ -0.8
GARNL3-216ENST00000481242 SNRNP35Q16560 246 aaKnown RBP10.03□□□□□ -0.8
GARNL3-216ENST00000481242 WDR75Q8IWA0 830 aaKnown RBP10.03□□□□□ -0.8
GARNL3-216ENST00000481242 RAB42Q8N4Z0 105 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.03□□□□□ -0.8
GARNL3-216ENST00000481242 GMCL1P1Q8NEA9 526 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 ZBTB9Q96C00 473 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 SLC13A4Q9UKG4 626 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 SYNPO2Q9UMS6 1093 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 FNDC3AQ9Y2H6 1198 aaKnown RBP10.03□□□□□ -0.8
GARNL3-216ENST00000481242 LRRIQ1Q96JM4 1722 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 CARNS1A5YM72 827 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 PP2D1A8MPX8 630 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 GPR182O15218 404 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 CYP2C8P10632 490 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 CXCR5P32302 372 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 TROAPQ12815 778 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 TRIM67Q6ZTA4 783 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 PASD1Q8IV76 773 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 PRMT6Q96LA8 375 aaPredicted RBP10.03□□□□□ -0.8
GARNL3-216ENST00000481242 AGPAT1Q99943 283 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 NT5C1AQ9BXI3 368 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 GOLPH3LQ9H4A5 285 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 DHX35Q9H5Z1 703 aaKnown RBP10.03□□□□□ -0.8
GARNL3-216ENST00000481242 CAPN11Q9UMQ6 739 aa10.03□□□□□ -0.8
GARNL3-216ENST00000481242 UBQLN1Q9UMX0 589 aaKnown RBP10.03□□□□□ -0.8
GARNL3-216ENST00000481242 A0A087WWV3 80 aa10.02□□□□□ -0.8
GARNL3-216ENST00000481242 TXNDC9O14530 226 aa10.02□□□□□ -0.8
GARNL3-216ENST00000481242 NVLO15381 856 aaKnown RBP10.02□□□□□ -0.8
GARNL3-216ENST00000481242 CSPG5O95196 566 aa10.02□□□□□ -0.8
GARNL3-216ENST00000481242 TRIM49P0CI25 452 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms