RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 SKIDA1Q1XH10 827 aa8.4□□□□□ -1.06
CBX3-206ENST00000481057 STRA8Q7Z7C7 330 aa8.4□□□□□ -1.06
CBX3-206ENST00000481057 EFHBQ8N7U6 833 aa8.4□□□□□ -1.06
CBX3-206ENST00000481057 CLIC6Q96NY7 704 aa8.4□□□□□ -1.06
CBX3-206ENST00000481057 WRNIP1Q96S55 665 aa8.4□□□□□ -1.06
CBX3-206ENST00000481057 KRTAP4-8Q9BYQ9 185 aa8.4□□□□□ -1.06
CBX3-206ENST00000481057 SLC39A2Q9NP94 309 aa8.4□□□□□ -1.06
CBX3-206ENST00000481057 ACSS2Q9NR19 701 aa8.4□□□□□ -1.06
CBX3-206ENST00000481057 ARHGAP28Q9P2N2 729 aa8.4□□□□□ -1.06
CBX3-206ENST00000481057 SPO11Q9Y5K1 396 aa8.4□□□□□ -1.06
CBX3-206ENST00000481057 DCHS1Q96JQ0 3298 aa8.4□□□□□ -1.07
CBX3-206ENST00000481057 FASNP49327 2511 aaKnown RBP8.4□□□□□ -1.07
CBX3-206ENST00000481057 SSC5DA1L4H1 1573 aa8.39□□□□□ -1.07
CBX3-206ENST00000481057 WASHC2AQ641Q2 1341 aa8.39□□□□□ -1.07
CBX3-206ENST00000481057 FAM205AQ6ZU69 1335 aa8.39□□□□□ -1.07
CBX3-206ENST00000481057 TFRCP02786 760 aaKnown RBP8.39□□□□□ -1.07
CBX3-206ENST00000481057 CYP19A1P11511 503 aaPredicted RBP8.39□□□□□ -1.07
CBX3-206ENST00000481057 BPIP17213 487 aa8.39□□□□□ -1.07
CBX3-206ENST00000481057 CNGA1P29973 690 aa8.39□□□□□ -1.07
CBX3-206ENST00000481057 MC4RP32245 332 aa8.39□□□□□ -1.07
CBX3-206ENST00000481057 LSSP48449 732 aa8.39□□□□□ -1.07
CBX3-206ENST00000481057 FNTBP49356 437 aa8.39□□□□□ -1.07
CBX3-206ENST00000481057 AFF3P51826 1226 aaKnown RBP8.39□□□□□ -1.07
CBX3-206ENST00000481057 IL2P60568 153 aa8.39□□□□□ -1.07
CBX3-206ENST00000481057 CT47A1Q5JQC4 288 aaPredicted RBP8.39□□□□□ -1.07
CBX3-206ENST00000481057 OTUD7BQ6GQQ9 843 aa8.39□□□□□ -1.07
CBX3-206ENST00000481057 NECAB2Q7Z6G3 386 aa8.39□□□□□ -1.07
CBX3-206ENST00000481057 IGDCC4Q8TDY8 1250 aa8.39□□□□□ -1.07
CBX3-206ENST00000481057 DPF2Q92785 391 aa8.39□□□□□ -1.07
CBX3-206ENST00000481057 UIMC1Q96RL1 719 aa8.39□□□□□ -1.07
CBX3-206ENST00000481057 ELF4Q99607 663 aaPredicted RBP8.39□□□□□ -1.07
CBX3-206ENST00000481057 SPATA6Q9NWH7 488 aaPredicted RBP8.39□□□□□ -1.07
CBX3-206ENST00000481057 DBX1A6NMT0 343 aa8.38□□□□□ -1.07
CBX3-206ENST00000481057 MPIG6BO95866 241 aa8.38□□□□□ -1.07
CBX3-206ENST00000481057 SLC9A1P19634 815 aa8.38□□□□□ -1.07
CBX3-206ENST00000481057 PTGS1P23219 599 aa8.38□□□□□ -1.07
CBX3-206ENST00000481057 KPNA1P52294 538 aaPredicted RBP8.38□□□□□ -1.07
CBX3-206ENST00000481057 STRN3Q13033 797 aa8.38□□□□□ -1.07
CBX3-206ENST00000481057 TMEM151BQ8IW70 566 aa8.38□□□□□ -1.07
CBX3-206ENST00000481057 USP7Q93009 1102 aa8.38□□□□□ -1.07
CBX3-206ENST00000481057 TOX2Q96NM4 488 aa8.38□□□□□ -1.07
CBX3-206ENST00000481057 GBP4Q96PP9 640 aa8.38□□□□□ -1.07
CBX3-206ENST00000481057 ARHGAP39Q9C0H5 1083 aa8.38□□□□□ -1.07
CBX3-206ENST00000481057 IRF2BPLQ9H1B7 796 aa8.38□□□□□ -1.07
CBX3-206ENST00000481057 ASB1Q9Y576 335 aa8.38□□□□□ -1.07
CBX3-206ENST00000481057 TPRP12270 2363 aaKnown RBP8.37□□□□□ -1.07
CBX3-206ENST00000481057 FFAR3O14843 346 aa8.37□□□□□ -1.07
CBX3-206ENST00000481057 FKBP9O95302 570 aa8.37□□□□□ -1.07
CBX3-206ENST00000481057 CYP17A1P05093 508 aa8.37□□□□□ -1.07
CBX3-206ENST00000481057 POU3F3P20264 500 aaPredicted RBP8.37□□□□□ -1.07
CBX3-206ENST00000481057 OCRLQ01968 901 aa8.37□□□□□ -1.07
CBX3-206ENST00000481057 PRR31Q5SQ13 230 aa8.37□□□□□ -1.07
CBX3-206ENST00000481057 PHF19Q5T6S3 580 aa8.37□□□□□ -1.07
CBX3-206ENST00000481057 FKBP9P1Q75LS8 142 aa8.37□□□□□ -1.07
CBX3-206ENST00000481057 C1QL4Q86Z23 238 aa8.37□□□□□ -1.07
CBX3-206ENST00000481057 LRRC56Q8IYG6 542 aaPredicted RBP8.37□□□□□ -1.07
CBX3-206ENST00000481057 HIPK4Q8NE63 616 aa8.37□□□□□ -1.07
CBX3-206ENST00000481057 FAM126AQ9BYI3 521 aaPredicted RBP8.37□□□□□ -1.07
CBX3-206ENST00000481057 VPS33BQ9H267 617 aa8.37□□□□□ -1.07
CBX3-206ENST00000481057 SPTLC3Q9NUV7 552 aa8.37□□□□□ -1.07
CBX3-206ENST00000481057 ARHGAP20Q9P2F6 1191 aa8.37□□□□□ -1.07
CBX3-206ENST00000481057 GPR179Q6PRD1 2367 aa8.37□□□□□ -1.07
CBX3-206ENST00000481057 XIRP2A4UGR9 3374 aa8.37□□□□□ -1.07
CBX3-206ENST00000481057 RTL1A6NKG5 1358 aa8.36□□□□□ -1.07
CBX3-206ENST00000481057 EVC2Q86UK5 1308 aa8.36□□□□□ -1.07
CBX3-206ENST00000481057 SH3D21A4FU49 640 aa8.36□□□□□ -1.07
CBX3-206ENST00000481057 PI4K2BG5E9Z4 385 aa8.36□□□□□ -1.07
CBX3-206ENST00000481057 TGM5O43548 720 aa8.36□□□□□ -1.07
CBX3-206ENST00000481057 PTX3P26022 381 aaPredicted RBP8.36□□□□□ -1.07
CBX3-206ENST00000481057 PRMT2P55345 433 aa8.36□□□□□ -1.07
CBX3-206ENST00000481057 UBXN2AP68543 259 aa8.36□□□□□ -1.07
CBX3-206ENST00000481057 PRAMEF18Q5VWM3 479 aa8.36□□□□□ -1.07
CBX3-206ENST00000481057 ESRP1Q6NXG1 681 aaKnown RBP8.36□□□□□ -1.07
CBX3-206ENST00000481057 RTN4RL1Q86UN2 441 aaPredicted RBP8.36□□□□□ -1.07
CBX3-206ENST00000481057 DIS3LQ8TF46 1054 aaKnown RBP8.36□□□□□ -1.07
CBX3-206ENST00000481057 IFT22Q9H7X7 185 aa8.36□□□□□ -1.07
CBX3-206ENST00000481057 INCENPQ9NQS7 918 aa8.36□□□□□ -1.07
CBX3-206ENST00000481057 ZFP69BQ9UJL9 534 aa8.36□□□□□ -1.07
CBX3-206ENST00000481057 CROTQ9UKG9 612 aa8.36□□□□□ -1.07
CBX3-206ENST00000481057 A0A1W2PP64 1363 aa8.35□□□□□ -1.07
CBX3-206ENST00000481057 ANKRD62A6NC57 917 aa8.35□□□□□ -1.07
CBX3-206ENST00000481057 GOLGA6L22H0YM25 854 aa8.35□□□□□ -1.07
CBX3-206ENST00000481057 NEMP1O14524 444 aa8.35□□□□□ -1.07
CBX3-206ENST00000481057 IL18BPO95998 194 aa8.35□□□□□ -1.07
CBX3-206ENST00000481057 CAPN2P17655 700 aa8.35□□□□□ -1.07
CBX3-206ENST00000481057 RPL13P26373 211 aaKnown RBP8.35□□□□□ -1.07
CBX3-206ENST00000481057 CFPP27918 469 aa8.35□□□□□ -1.07
CBX3-206ENST00000481057 GLRBP48167 497 aa8.35□□□□□ -1.07
CBX3-206ENST00000481057 EIF5P55010 431 aaKnown RBP8.35□□□□□ -1.07
CBX3-206ENST00000481057 RRS1Q15050 365 aaKnown RBP8.35□□□□□ -1.07
CBX3-206ENST00000481057 EPHA7Q15375 998 aa8.35□□□□□ -1.07
CBX3-206ENST00000481057 TCERG1LQ5VWI1 586 aa8.35□□□□□ -1.07
CBX3-206ENST00000481057 NBPF5PQ86XG9 351 aaPredicted RBP8.35□□□□□ -1.07
CBX3-206ENST00000481057 FOXRED1Q96CU9 486 aaPredicted RBP8.35□□□□□ -1.07
CBX3-206ENST00000481057 C16orf92Q96LL3 132 aa8.35□□□□□ -1.07
CBX3-206ENST00000481057 TTC1Q99614 292 aa8.35□□□□□ -1.07
CBX3-206ENST00000481057 AMNQ9BXJ7 453 aa8.35□□□□□ -1.07
CBX3-206ENST00000481057 EMC7Q9NPA0 242 aa8.35□□□□□ -1.07
CBX3-206ENST00000481057 TOMM22Q9NS69 142 aa8.35□□□□□ -1.07
CBX3-206ENST00000481057 KCND1Q9NSA2 647 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms