RNA–Protein interactions for RNA: ENST00000480828.5

UBE2F-221, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 802 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-221ENST00000480828 PLS1Q14651 629 aa4.4□□□□□ -1.71
UBE2F-221ENST00000480828 RAB3GAP1Q15042 981 aa4.4□□□□□ -1.71
UBE2F-221ENST00000480828 MAPRE1Q15691 268 aaKnown RBP4.4□□□□□ -1.71
UBE2F-221ENST00000480828 KLHDC7AQ5VTJ3 777 aa4.4□□□□□ -1.71
UBE2F-221ENST00000480828 HIBCHQ6NVY1 386 aaPredicted RBP4.4□□□□□ -1.71
UBE2F-221ENST00000480828 GGT6Q6P531 493 aa4.4□□□□□ -1.71
UBE2F-221ENST00000480828 TLDC1Q6P9B6 456 aa4.4□□□□□ -1.71
UBE2F-221ENST00000480828 MMS22LQ6ZRQ5 1243 aa4.4□□□□□ -1.71
UBE2F-221ENST00000480828 HEATR3Q7Z4Q2 680 aa4.4□□□□□ -1.71
UBE2F-221ENST00000480828 TTC7BQ86TV6 843 aa4.4□□□□□ -1.71
UBE2F-221ENST00000480828 CLASRPQ8N2M8 674 aaKnown RBP4.4□□□□□ -1.71
UBE2F-221ENST00000480828 SPATA5Q8NB90 893 aa4.4□□□□□ -1.71
UBE2F-221ENST00000480828 IL31RAQ8NI17 732 aa4.4□□□□□ -1.71
UBE2F-221ENST00000480828 CALML6Q8TD86 181 aa4.4□□□□□ -1.71
UBE2F-221ENST00000480828 NSUN6Q8TEA1 469 aaKnown RBP4.4□□□□□ -1.71
UBE2F-221ENST00000480828 PEX11GQ96HA9 241 aa4.4□□□□□ -1.71
UBE2F-221ENST00000480828 C7orf25Q9BPX7 421 aa4.4□□□□□ -1.71
UBE2F-221ENST00000480828 MYLK2Q9H1R3 596 aa4.4□□□□□ -1.71
UBE2F-221ENST00000480828 KIAA1586Q9HCI6 787 aa4.4□□□□□ -1.71
UBE2F-221ENST00000480828 RBM12Q9NTZ6 932 aaKnown RBP4.4□□□□□ -1.71
UBE2F-221ENST00000480828 LMBRD1Q9NUN5 540 aa4.4□□□□□ -1.71
UBE2F-221ENST00000480828 DTLQ9NZJ0 730 aa4.4□□□□□ -1.71
UBE2F-221ENST00000480828 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.4□□□□□ -1.71
UBE2F-221ENST00000480828 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.4□□□□□ -1.71
UBE2F-221ENST00000480828 CPA4Q9UI42 421 aa4.4□□□□□ -1.71
UBE2F-221ENST00000480828 NUDT5Q9UKK9 219 aa4.4□□□□□ -1.71
UBE2F-221ENST00000480828 GPR52Q9Y2T5 361 aa4.4□□□□□ -1.71
UBE2F-221ENST00000480828 TTBK1Q5TCY1 1321 aaPredicted RBP4.4□□□□□ -1.71
UBE2F-221ENST00000480828 A0A0A6YYK5 440 aaPredicted RBP4.39□□□□□ -1.71
UBE2F-221ENST00000480828 ZNF839A8K0R7 811 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 FRS3O43559 492 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 TMEM127O75204 238 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 MAPK9P45984 424 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 MAPKAPK2P49137 400 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 NCKAP1LP55160 1127 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 NKX6-1P78426 367 aaPredicted RBP4.39□□□□□ -1.71
UBE2F-221ENST00000480828 FGL2Q14314 439 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 PUM3Q15397 648 aaKnown RBP4.39□□□□□ -1.71
UBE2F-221ENST00000480828 VMACQ2NL98 169 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 CCDC38Q502W7 563 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 PHF19Q5T6S3 580 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 TEPPQ6URK8 271 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 LIPIQ6XZB0 460 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 SAPCD2Q86UD0 394 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 PROSER1Q86XN7 944 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 TMEM151BQ8IW70 566 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 ANKS1AQ92625 1134 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 TOE1Q96GM8 510 aaKnown RBP4.39□□□□□ -1.71
UBE2F-221ENST00000480828 CLPTM1LQ96KA5 538 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 DMRTA2Q96SC8 542 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 VRK1Q99986 396 aaPredicted RBP4.39□□□□□ -1.71
UBE2F-221ENST00000480828 SOX7Q9BT81 388 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 ZHX3Q9H4I2 956 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 ZCCHC4Q9H5U6 513 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 ZNF287Q9HBT7 754 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 STARD7Q9NQZ5 370 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 CPNE7Q9UBL6 633 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 ZNF69Q9UC07 566 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 ABCF2Q9UG63 623 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 DBR1Q9UK59 544 aaKnown RBP4.39□□□□□ -1.71
UBE2F-221ENST00000480828 OGDHLQ9ULD0 1010 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 WASF3Q9UPY6 502 aa4.39□□□□□ -1.71
UBE2F-221ENST00000480828 A0A1W2PPL8 197 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 M0R3H8 397 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 SLC16A6O15403 523 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 PHGDHO43175 533 aaKnown RBP4.38□□□□□ -1.71
UBE2F-221ENST00000480828 AKR1B10O60218 316 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 FOXD2O60548 495 aaPredicted RBP4.38□□□□□ -1.71
UBE2F-221ENST00000480828 FGF18O76093 207 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 SEC24DO94855 1032 aaPredicted RBP4.38□□□□□ -1.71
UBE2F-221ENST00000480828 CYBBP04839 570 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 FAM163BP0C2L3 166 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 HARSP12081 509 aaKnown RBP4.38□□□□□ -1.71
UBE2F-221ENST00000480828 BRAFP15056 766 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 XPAP23025 273 aaPredicted RBP4.38□□□□□ -1.71
UBE2F-221ENST00000480828 APEX1P27695 318 aaKnown RBP4.38□□□□□ -1.71
UBE2F-221ENST00000480828 ADSLP30566 484 aaPredicted RBP4.38□□□□□ -1.71
UBE2F-221ENST00000480828 SLC7A1P30825 629 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 ARL4AP40617 200 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 TECP42680 631 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 SLC6A9P48067 706 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 CCT5P48643 541 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 GPR15P49685 360 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 ANTXR2P58335 489 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 PRR5P85299 388 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 FMO1Q01740 532 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 TARDBPQ13148 414 aaKnown RBP eCLIP4.38□□□□□ -1.71
UBE2F-221ENST00000480828 VWA3BQ502W6 1294 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 THEMIS2Q5TEJ8 643 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 PPP4R3AQ6IN85 833 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 CNKSR3Q6P9H4 555 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 PAQR3Q6TCH7 311 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 TMC5Q6UXY8 1006 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 SESTD1Q86VW0 696 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 GLB1L2Q8IW92 636 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 FAM126BQ8IXS8 530 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 FAM26EQ8N5C1 309 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 RNF152Q8N8N0 203 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 C3orf20Q8ND61 904 aa4.38□□□□□ -1.71
UBE2F-221ENST00000480828 OR5AN1Q8NGI8 311 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms