RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 CNGB1Q14028 1251 aaPredicted RBP6.9□□□□□ -1.3
CALD1-219ENST00000480638 NRN1LQ496H8 165 aa6.9□□□□□ -1.3
CALD1-219ENST00000480638 FAM47AQ5JRC9 791 aa6.9□□□□□ -1.3
CALD1-219ENST00000480638 METTL24Q5JXM2 366 aa6.9□□□□□ -1.3
CALD1-219ENST00000480638 NAIF1Q69YI7 327 aaPredicted RBP6.9□□□□□ -1.3
CALD1-219ENST00000480638 MIGA2Q7L4E1 593 aa6.9□□□□□ -1.3
CALD1-219ENST00000480638 TMPRSS6Q8IU80 811 aa6.9□□□□□ -1.3
CALD1-219ENST00000480638 C1orf210Q8IVY1 113 aa6.9□□□□□ -1.3
CALD1-219ENST00000480638 MNTQ99583 582 aa6.9□□□□□ -1.3
CALD1-219ENST00000480638 SENP6Q9GZR1 1112 aaPredicted RBP6.9□□□□□ -1.3
CALD1-219ENST00000480638 LDAHQ9H6V9 325 aa6.9□□□□□ -1.3
CALD1-219ENST00000480638 ATRNL1Q5VV63 1379 aa6.9□□□□□ -1.31
CALD1-219ENST00000480638 GOLGA6L6A8MZA4 724 aa6.89□□□□□ -1.31
CALD1-219ENST00000480638 PRR5-ARHGAP8B1AHC4 643 aa6.89□□□□□ -1.31
CALD1-219ENST00000480638 PLSCR1O15162 318 aa6.89□□□□□ -1.31
CALD1-219ENST00000480638 MATN3O15232 486 aa6.89□□□□□ -1.31
CALD1-219ENST00000480638 ZRANB2O95218 330 aaKnown RBP eCLIP6.89□□□□□ -1.31
CALD1-219ENST00000480638 ALOX15P16050 662 aaPredicted RBP6.89□□□□□ -1.31
CALD1-219ENST00000480638 RECQLP46063 649 aaPredicted RBP6.89□□□□□ -1.31
CALD1-219ENST00000480638 VPS72Q15906 364 aa6.89□□□□□ -1.31
CALD1-219ENST00000480638 ZXDCQ2QGD7 858 aaPredicted RBP6.89□□□□□ -1.31
CALD1-219ENST00000480638 SLC35B2Q8TB61 432 aa6.89□□□□□ -1.31
CALD1-219ENST00000480638 CEP89Q96ST8 783 aa6.89□□□□□ -1.31
CALD1-219ENST00000480638 C7orf25Q9BPX7 421 aa6.89□□□□□ -1.31
CALD1-219ENST00000480638 MANSC1Q9H8J5 431 aa6.89□□□□□ -1.31
CALD1-219ENST00000480638 SERPINB13Q9UIV8 391 aa6.89□□□□□ -1.31
CALD1-219ENST00000480638 AJAP1Q9UKB5 411 aaPredicted RBP6.89□□□□□ -1.31
CALD1-219ENST00000480638 IPPQ9Y573 584 aa6.89□□□□□ -1.31
CALD1-219ENST00000480638 XDHP47989 1333 aa6.88□□□□□ -1.31
CALD1-219ENST00000480638 TBKBP1A7MCY6 615 aa6.88□□□□□ -1.31
CALD1-219ENST00000480638 CXorf49A8MYA2 514 aaPredicted RBP6.88□□□□□ -1.31
CALD1-219ENST00000480638 PJA2O43164 708 aa6.88□□□□□ -1.31
CALD1-219ENST00000480638 HTRA2O43464 458 aaPredicted RBP6.88□□□□□ -1.31
CALD1-219ENST00000480638 ALDH1L1O75891 902 aa6.88□□□□□ -1.31
CALD1-219ENST00000480638 SNUPNO95149 360 aaKnown RBP6.88□□□□□ -1.31
CALD1-219ENST00000480638 IL2RBP14784 551 aa6.88□□□□□ -1.31
CALD1-219ENST00000480638 FPR1P21462 350 aa6.88□□□□□ -1.31
CALD1-219ENST00000480638 EDNRBP24530 442 aa6.88□□□□□ -1.31
CALD1-219ENST00000480638 ADKP55263 362 aaKnown RBP6.88□□□□□ -1.31
CALD1-219ENST00000480638 PUM1Q14671 1186 aaKnown RBP eCLIP6.88□□□□□ -1.31
CALD1-219ENST00000480638 CSRP2Q16527 193 aa6.88□□□□□ -1.31
CALD1-219ENST00000480638 BMT2Q1RMZ1 405 aa6.88□□□□□ -1.31
CALD1-219ENST00000480638 TMEM240Q5SV17 173 aa6.88□□□□□ -1.31
CALD1-219ENST00000480638 AFMIDQ63HM1 303 aa6.88□□□□□ -1.31
CALD1-219ENST00000480638 CCHCR1Q8TD31 782 aa6.88□□□□□ -1.31
CALD1-219ENST00000480638 CASKIN2Q8WXE0 1202 aa6.88□□□□□ -1.31
CALD1-219ENST00000480638 COA7Q96BR5 231 aa6.88□□□□□ -1.31
CALD1-219ENST00000480638 KRTAP4-7Q9BYR0 210 aa6.88□□□□□ -1.31
CALD1-219ENST00000480638 TMEM140Q9NV12 185 aa6.88□□□□□ -1.31
CALD1-219ENST00000480638 MOCS1Q9NZB8 636 aa6.88□□□□□ -1.31
CALD1-219ENST00000480638 CEP72Q9P209 647 aa6.88□□□□□ -1.31
CALD1-219ENST00000480638 LIMCH1Q9UPQ0 1083 aa6.88□□□□□ -1.31
CALD1-219ENST00000480638 CLCA2Q9UQC9 943 aa6.88□□□□□ -1.31
CALD1-219ENST00000480638 LUC7L2Q9Y383 392 aaKnown RBP6.88□□□□□ -1.31
CALD1-219ENST00000480638 GPR32O75388 356 aa6.87□□□□□ -1.31
CALD1-219ENST00000480638 C1SP09871 688 aa6.87□□□□□ -1.31
CALD1-219ENST00000480638 TNFRSF1AP19438 455 aa6.87□□□□□ -1.31
CALD1-219ENST00000480638 PCSK1P29120 753 aa6.87□□□□□ -1.31
CALD1-219ENST00000480638 ALDH1A3P47895 512 aa6.87□□□□□ -1.31
CALD1-219ENST00000480638 PTH1RQ03431 593 aa6.87□□□□□ -1.31
CALD1-219ENST00000480638 C3orf36Q3SXR2 165 aa6.87□□□□□ -1.31
CALD1-219ENST00000480638 GGNQ86UU5 652 aa6.87□□□□□ -1.31
CALD1-219ENST00000480638 RHOT1Q8IXI2 618 aa6.87□□□□□ -1.31
CALD1-219ENST00000480638 CMTR2Q8IYT2 770 aaKnown RBP6.87□□□□□ -1.31
CALD1-219ENST00000480638 STON2Q8WXE9 905 aa6.87□□□□□ -1.31
CALD1-219ENST00000480638 HDAC10Q969S8 669 aa6.87□□□□□ -1.31
CALD1-219ENST00000480638 CYFIP2Q96F07 1278 aa6.87□□□□□ -1.31
CALD1-219ENST00000480638 ZNF703Q9H7S9 590 aaPredicted RBP6.87□□□□□ -1.31
CALD1-219ENST00000480638 SPON1Q9HCB6 807 aa6.87□□□□□ -1.31
CALD1-219ENST00000480638 CCDC154A6NI56 674 aa6.86□□□□□ -1.31
CALD1-219ENST00000480638 GRXCR1A8MXD5 290 aa6.86□□□□□ -1.31
CALD1-219ENST00000480638 AMY1AP04745 511 aa6.86□□□□□ -1.31
CALD1-219ENST00000480638 SNRPA1P09661 255 aaKnown RBP6.86□□□□□ -1.31
CALD1-219ENST00000480638 RAP2AP10114 183 aa6.86□□□□□ -1.31
CALD1-219ENST00000480638 CLRN1P58418 232 aa6.86□□□□□ -1.31
CALD1-219ENST00000480638 MTM1Q13496 603 aa6.86□□□□□ -1.31
CALD1-219ENST00000480638 TOB2Q14106 344 aaPredicted RBP6.86□□□□□ -1.31
CALD1-219ENST00000480638 TTF1Q15361 905 aaPredicted RBP6.86□□□□□ -1.31
CALD1-219ENST00000480638 UAP1L1Q3KQV9 507 aa6.86□□□□□ -1.31
CALD1-219ENST00000480638 DRICH1Q6PGQ1 229 aaPredicted RBP6.86□□□□□ -1.31
CALD1-219ENST00000480638 DBX2Q6ZNG2 339 aa6.86□□□□□ -1.31
CALD1-219ENST00000480638 CPA6Q8N4T0 437 aa6.86□□□□□ -1.31
CALD1-219ENST00000480638 ZGPATQ8N5A5 531 aaKnown RBP6.86□□□□□ -1.31
CALD1-219ENST00000480638 RNF169Q8NCN4 708 aa6.86□□□□□ -1.31
CALD1-219ENST00000480638 CACTINQ8WUQ7 758 aaKnown RBP6.86□□□□□ -1.31
CALD1-219ENST00000480638 TFAP2CQ92754 450 aa6.86□□□□□ -1.31
CALD1-219ENST00000480638 HOOK2Q96ED9 719 aa6.86□□□□□ -1.31
CALD1-219ENST00000480638 ZNF503Q96F45 646 aa6.86□□□□□ -1.31
CALD1-219ENST00000480638 ACTL7AQ9Y615 435 aa6.86□□□□□ -1.31
CALD1-219ENST00000480638 MYBBP1AQ9BQG0 1328 aaKnown RBP6.85□□□□□ -1.31
CALD1-219ENST00000480638 ATP8B2P98198 1209 aa6.85□□□□□ -1.31
CALD1-219ENST00000480638 MCL1Q07820 350 aa6.85□□□□□ -1.31
CALD1-219ENST00000480638 FOXE3Q13461 319 aa6.85□□□□□ -1.31
CALD1-219ENST00000480638 RRP12Q5JTH9 1297 aaKnown RBP6.85□□□□□ -1.31
CALD1-219ENST00000480638 MIIPQ5JXC2 388 aa6.85□□□□□ -1.31
CALD1-219ENST00000480638 MIER2Q8N344 545 aa6.85□□□□□ -1.31
CALD1-219ENST00000480638 OR10H5Q8NGA6 315 aa6.85□□□□□ -1.31
CALD1-219ENST00000480638 ZFP28Q8NHY6 868 aa6.85□□□□□ -1.31
CALD1-219ENST00000480638 RAB24Q969Q5 203 aa6.85□□□□□ -1.31
CALD1-219ENST00000480638 NDC1Q9BTX1 674 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms