RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 TGM5O43548 720 aa20.8■□□□□ 0.92
ABCF3-214ENST00000480562 RECQL4O94761 1208 aa20.8■□□□□ 0.92
ABCF3-214ENST00000480562 PRKCBP05771 671 aa20.8■□□□□ 0.92
ABCF3-214ENST00000480562 CCT6AP40227 531 aaKnown RBP20.8■□□□□ 0.92
ABCF3-214ENST00000480562 RBM25P49756 843 aaKnown RBP20.8■□□□□ 0.92
ABCF3-214ENST00000480562 TUSC3Q13454 348 aa20.8■□□□□ 0.92
ABCF3-214ENST00000480562 MAPK6Q16659 721 aa20.8■□□□□ 0.92
ABCF3-214ENST00000480562 EEF1DP3Q658K8 133 aa20.8■□□□□ 0.92
ABCF3-214ENST00000480562 ELMSAN1Q6PJG2 1045 aa20.8■□□□□ 0.92
ABCF3-214ENST00000480562 PRSS55Q6UWB4 352 aaPredicted RBP20.8■□□□□ 0.92
ABCF3-214ENST00000480562 C4orf32Q8N8J7 132 aa20.8■□□□□ 0.92
ABCF3-214ENST00000480562 FAM184AQ8NB25 1140 aa20.8■□□□□ 0.92
ABCF3-214ENST00000480562 DEPTORQ8TB45 409 aa20.8■□□□□ 0.92
ABCF3-214ENST00000480562 SMG7Q92540 1137 aaKnown RBP20.8■□□□□ 0.92
ABCF3-214ENST00000480562 ATOH1Q92858 354 aaPredicted RBP20.8■□□□□ 0.92
ABCF3-214ENST00000480562 ZNF707Q96C28 371 aaPredicted RBP20.8■□□□□ 0.92
ABCF3-214ENST00000480562 CCDC113Q9H0I3 377 aa20.8■□□□□ 0.92
ABCF3-214ENST00000480562 MFSD1Q9H3U5 465 aa20.8■□□□□ 0.92
ABCF3-214ENST00000480562 KCNK12Q9HB15 430 aa20.8■□□□□ 0.92
ABCF3-214ENST00000480562 WDR6Q9NNW5 1121 aaKnown RBP20.8■□□□□ 0.92
ABCF3-214ENST00000480562 DPP7Q9UHL4 492 aa20.8■□□□□ 0.92
ABCF3-214ENST00000480562 ACKR2O00590 384 aa20.79■□□□□ 0.92
ABCF3-214ENST00000480562 PTGESO14684 152 aa20.79■□□□□ 0.92
ABCF3-214ENST00000480562 GBP2P32456 591 aaPredicted RBP20.79■□□□□ 0.92
ABCF3-214ENST00000480562 NAMPTP43490 491 aa20.79■□□□□ 0.92
ABCF3-214ENST00000480562 HMGN5P82970 282 aaKnown RBP20.79■□□□□ 0.92
ABCF3-214ENST00000480562 TDGQ13569 410 aa20.79■□□□□ 0.92
ABCF3-214ENST00000480562 RTP2Q5QGT7 225 aa20.79■□□□□ 0.92
ABCF3-214ENST00000480562 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.79■□□□□ 0.92
ABCF3-214ENST00000480562 CLUHO75153 1309 aa20.78■□□□□ 0.92
ABCF3-214ENST00000480562 GALR2O43603 387 aaPredicted RBP20.78■□□□□ 0.92
ABCF3-214ENST00000480562 KIF4AO95239 1232 aa20.78■□□□□ 0.92
ABCF3-214ENST00000480562 HAUS3Q68CZ6 603 aa20.78■□□□□ 0.92
ABCF3-214ENST00000480562 ASTLQ6HA08 431 aaPredicted RBP20.78■□□□□ 0.92
ABCF3-214ENST00000480562 LILRA6Q6PI73 481 aa20.78■□□□□ 0.92
ABCF3-214ENST00000480562 HDAC7Q8WUI4 952 aa20.78■□□□□ 0.92
ABCF3-214ENST00000480562 RSAD2Q8WXG1 361 aa20.78■□□□□ 0.92
ABCF3-214ENST00000480562 ZSCAN31Q96LW9 406 aaPredicted RBP20.78■□□□□ 0.92
ABCF3-214ENST00000480562 MYADMQ96S97 322 aa20.78■□□□□ 0.92
ABCF3-214ENST00000480562 KIF2CQ99661 725 aa20.78■□□□□ 0.92
ABCF3-214ENST00000480562 BHMT2Q9H2M3 363 aa20.78■□□□□ 0.92
ABCF3-214ENST00000480562 PLEKHA4Q9H4M7 779 aa20.78■□□□□ 0.92
ABCF3-214ENST00000480562 PIDD1Q9HB75 910 aa20.78■□□□□ 0.92
ABCF3-214ENST00000480562 FNIP2Q9P278 1114 aa20.78■□□□□ 0.92
ABCF3-214ENST00000480562 LRWD1Q9UFC0 647 aa20.78■□□□□ 0.92
ABCF3-214ENST00000480562 NOL7Q9UMY1 257 aaKnown RBP20.78■□□□□ 0.92
ABCF3-214ENST00000480562 KIAA1024Q9UPX6 916 aa20.78■□□□□ 0.92
ABCF3-214ENST00000480562 GDAQ9Y2T3 454 aa20.78■□□□□ 0.92
ABCF3-214ENST00000480562 SF3B1O75533 1304 aaKnown RBP eCLIP20.78■□□□□ 0.92
ABCF3-214ENST00000480562 THP07101 528 aa20.77■□□□□ 0.92
ABCF3-214ENST00000480562 TRAPPC10P48553 1259 aa20.77■□□□□ 0.92
ABCF3-214ENST00000480562 FXR2P51116 673 aaKnown RBP eCLIP20.77■□□□□ 0.92
ABCF3-214ENST00000480562 PPP2R5AQ15172 486 aa20.77■□□□□ 0.92
ABCF3-214ENST00000480562 FAM171A1Q5VUB5 890 aa20.77■□□□□ 0.92
ABCF3-214ENST00000480562 CYP26C1Q6V0L0 522 aa20.77■□□□□ 0.92
ABCF3-214ENST00000480562 GPR65Q8IYL9 337 aa20.77■□□□□ 0.92
ABCF3-214ENST00000480562 FLCNQ8NFG4 579 aa20.77■□□□□ 0.92
ABCF3-214ENST00000480562 STAMQ92783 540 aa20.77■□□□□ 0.92
ABCF3-214ENST00000480562 ADPGKQ9BRR6 497 aa20.77■□□□□ 0.92
ABCF3-214ENST00000480562 RHOBTB2Q9BYZ6 727 aa20.77■□□□□ 0.92
ABCF3-214ENST00000480562 NT5C3AQ9H0P0 336 aa20.77■□□□□ 0.92
ABCF3-214ENST00000480562 SH2B1Q9NRF2 756 aaPredicted RBP20.77■□□□□ 0.92
ABCF3-214ENST00000480562 DUSP12Q9UNI6 340 aa20.77■□□□□ 0.92
ABCF3-214ENST00000480562 NARSO43776 548 aaKnown RBP20.76■□□□□ 0.91
ABCF3-214ENST00000480562 MUTP22033 750 aa20.76■□□□□ 0.91
ABCF3-214ENST00000480562 TOB1P50616 345 aaPredicted RBP20.76■□□□□ 0.91
ABCF3-214ENST00000480562 NUBP1P53384 320 aa20.76■□□□□ 0.91
ABCF3-214ENST00000480562 NAB2Q15742 525 aa20.76■□□□□ 0.91
ABCF3-214ENST00000480562 NT5DC1Q5TFE4 455 aa20.76■□□□□ 0.91
ABCF3-214ENST00000480562 CEP57Q86XR8 500 aa20.76■□□□□ 0.91
ABCF3-214ENST00000480562 IFT74Q96LB3 600 aa20.76■□□□□ 0.91
ABCF3-214ENST00000480562 DDX19AQ9NUU7 478 aaKnown RBP20.76■□□□□ 0.91
ABCF3-214ENST00000480562 IGSF9Q9P2J2 1179 aa20.76■□□□□ 0.91
ABCF3-214ENST00000480562 FBXL21Q9UKT6 434 aa20.76■□□□□ 0.91
ABCF3-214ENST00000480562 C1RP00736 705 aa20.75■□□□□ 0.91
ABCF3-214ENST00000480562 CLCN5P51795 746 aa20.75■□□□□ 0.91
ABCF3-214ENST00000480562 CREMQ03060 361 aa20.75■□□□□ 0.91
ABCF3-214ENST00000480562 PTGDRQ13258 359 aa20.75■□□□□ 0.91
ABCF3-214ENST00000480562 CWF19L1Q69YN2 538 aaKnown RBP20.75■□□□□ 0.91
ABCF3-214ENST00000480562 SNX29Q8TEQ0 813 aa20.75■□□□□ 0.91
ABCF3-214ENST00000480562 KIFAP3Q92845 792 aa20.75■□□□□ 0.91
ABCF3-214ENST00000480562 TTPALQ9BTX7 342 aa20.75■□□□□ 0.91
ABCF3-214ENST00000480562 PRKD2Q9BZL6 878 aa20.75■□□□□ 0.91
ABCF3-214ENST00000480562 IRF2BPLQ9H1B7 796 aa20.75■□□□□ 0.91
ABCF3-214ENST00000480562 ZDHHC7Q9NXF8 308 aa20.75■□□□□ 0.91
ABCF3-214ENST00000480562 PCDHB6Q9Y5E3 794 aa20.75■□□□□ 0.91
ABCF3-214ENST00000480562 USP34Q70CQ2 3546 aa20.75■□□□□ 0.91
ABCF3-214ENST00000480562 ZFHX2Q9C0A1 2572 aaPredicted RBP20.75■□□□□ 0.91
ABCF3-214ENST00000480562 MTCL1Q9Y4B5 1905 aaKnown RBP20.74■□□□□ 0.91
ABCF3-214ENST00000480562 PP2D1A8MPX8 630 aa20.74■□□□□ 0.91
ABCF3-214ENST00000480562 ZMYND10O75800 440 aa20.74■□□□□ 0.91
ABCF3-214ENST00000480562 PAPLNO95428 1278 aa20.74■□□□□ 0.91
ABCF3-214ENST00000480562 NPR3P17342 541 aa20.74■□□□□ 0.91
ABCF3-214ENST00000480562 IGFBP6P24592 240 aaPredicted RBP20.74■□□□□ 0.91
ABCF3-214ENST00000480562 U2AF2P26368 475 aaKnown RBP eCLIP20.74■□□□□ 0.912e-7■■■□□ 15.9
ABCF3-214ENST00000480562 EFNA5P52803 228 aa20.74■□□□□ 0.91
ABCF3-214ENST00000480562 PSMD5Q16401 504 aa20.74■□□□□ 0.91
ABCF3-214ENST00000480562 DCAF4L1Q3SXM0 396 aa20.74■□□□□ 0.91
ABCF3-214ENST00000480562 GLRA4Q5JXX5 417 aa20.74■□□□□ 0.91
ABCF3-214ENST00000480562 ATF7IP2Q5U623 682 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms