RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 SLC9A9Q8IVB4 645 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 GPD1LQ8N335 351 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 CEP120Q8N960 986 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 RDH13Q8NBN7 331 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 SMG8Q8ND04 991 aaKnown RBP12.2□□□□□ -0.46
CLDN11-205ENST00000480067 TMEM174Q8WUU8 243 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 SAAL1Q96ER3 474 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 EEF2KMTQ96G04 330 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 DNAJC25Q9H1X3 360 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 ELAC1Q9H777 363 aaKnown RBP12.2□□□□□ -0.46
CLDN11-205ENST00000480067 UBN1Q9NPG3 1134 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 TOPORSQ9NS56 1045 aaPredicted RBP12.2□□□□□ -0.46
CLDN11-205ENST00000480067 DMAC2Q9NW81 257 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 CXXC1Q9P0U4 656 aaPredicted RBP12.2□□□□□ -0.46
CLDN11-205ENST00000480067 PARP2Q9UGN5 583 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 FRMD4BQ9Y2L6 1034 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 SIP14410 1827 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 GOLGA8IPA6NC78 632 aa12.19□□□□□ -0.46
CLDN11-205ENST00000480067 ZNF233A6NK53 670 aa12.19□□□□□ -0.46
CLDN11-205ENST00000480067 GOLGA8JA6NMD2 632 aa12.19□□□□□ -0.46
CLDN11-205ENST00000480067 FGFR1OPO95684 399 aaKnown RBP12.19□□□□□ -0.46
CLDN11-205ENST00000480067 SHHQ15465 462 aa12.19□□□□□ -0.46
CLDN11-205ENST00000480067 NFIL3Q16649 462 aa12.19□□□□□ -0.46
CLDN11-205ENST00000480067 TPD52L1Q16890 204 aaPredicted RBP12.19□□□□□ -0.46
CLDN11-205ENST00000480067 C9orf50Q5SZB4 431 aa12.19□□□□□ -0.46
CLDN11-205ENST00000480067 CEP135Q66GS9 1140 aa12.19□□□□□ -0.46
CLDN11-205ENST00000480067 TTI2Q6NXR4 508 aa12.19□□□□□ -0.46
CLDN11-205ENST00000480067 FOXR2Q6PJQ5 311 aa12.19□□□□□ -0.46
CLDN11-205ENST00000480067 ZNF598Q86UK7 904 aaKnown RBP12.19□□□□□ -0.46
CLDN11-205ENST00000480067 ABI1Q8IZP0 508 aa12.19□□□□□ -0.46
CLDN11-205ENST00000480067 CSGALNACT2Q8N6G5 542 aa12.19□□□□□ -0.46
CLDN11-205ENST00000480067 LPPQ93052 612 aa12.19□□□□□ -0.46
CLDN11-205ENST00000480067 TOP1MTQ969P6 601 aa12.19□□□□□ -0.46
CLDN11-205ENST00000480067 RNPC3Q96LT9 517 aaKnown RBP12.19□□□□□ -0.46
CLDN11-205ENST00000480067 FUCA2Q9BTY2 467 aa12.19□□□□□ -0.46
CLDN11-205ENST00000480067 RPF1Q9H9Y2 349 aaKnown RBP12.19□□□□□ -0.46
CLDN11-205ENST00000480067 PDE4DIPQ5VU43 2346 aa12.19□□□□□ -0.46
CLDN11-205ENST00000480067 HOXA2O43364 376 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 FAM189A1O60320 539 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 CAVIN2O95810 425 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 ATP2A2P16615 1042 aaKnown RBP12.18□□□□□ -0.46
CLDN11-205ENST00000480067 ATF7P17544 494 aaPredicted RBP12.18□□□□□ -0.46
CLDN11-205ENST00000480067 BMP8BP34820 402 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 PSMC2P35998 433 aaKnown RBP12.18□□□□□ -0.46
CLDN11-205ENST00000480067 DEFB103AP81534 67 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 SNRNP35Q16560 246 aaKnown RBP12.18□□□□□ -0.46
CLDN11-205ENST00000480067 ZBTB41Q5SVQ8 909 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 FAM117BQ6P1L5 589 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 GLB1LQ6UWU2 654 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 AGMOQ6ZNB7 445 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 C11orf57Q6ZUT1 292 aaPredicted RBP12.18□□□□□ -0.46
CLDN11-205ENST00000480067 TMEM192Q8IY95 271 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 PHOSPHO2Q8TCD6 241 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 FAM212AQ96EL1 285 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 ZBED2Q9BTP6 218 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 RBAKQ9NYW8 714 aaPredicted RBP12.18□□□□□ -0.46
CLDN11-205ENST00000480067 KLK14Q9P0G3 267 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 CPSF3Q9UKF6 684 aaKnown RBP12.18□□□□□ -0.46
CLDN11-205ENST00000480067 GIT1Q9Y2X7 761 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 LTBP2Q14767 1821 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 MEIS3P2A8K0S8 358 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 RECQL4O94761 1208 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 CXCL8P10145 99 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 FGFR1P11362 822 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 TNFSF9P41273 254 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 ZNF165P49910 485 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 POU5F1Q01860 360 aaKnown RBP12.18□□□□□ -0.46
CLDN11-205ENST00000480067 SPATA1Q5VX52 437 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 LRSAM1Q6UWE0 723 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 CRELD2Q6UXH1 353 aaPredicted RBP12.18□□□□□ -0.46
CLDN11-205ENST00000480067 CBWD2Q8IUF1 395 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 CRIPAKQ8N1N5 446 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 ZSWIM2Q8NEG5 633 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 ENOX1Q8TC92 643 aaKnown RBP12.18□□□□□ -0.46
CLDN11-205ENST00000480067 FBXL18Q96ME1 805 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 CEP63Q96MT8 703 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 SLC9A7Q96T83 725 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 GAD1Q99259 594 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 DUSP9Q99956 384 aaKnown RBP12.18□□□□□ -0.46
CLDN11-205ENST00000480067 SRRTQ9BXP5 876 aaKnown RBP12.18□□□□□ -0.46
CLDN11-205ENST00000480067 RSAD1Q9HA92 442 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 PLEKHA5Q9HAU0 1116 aa12.18□□□□□ -0.46
CLDN11-205ENST00000480067 ARL5CA6NH57 179 aa12.17□□□□□ -0.46
CLDN11-205ENST00000480067 AKAP3O75969 853 aa12.17□□□□□ -0.46
CLDN11-205ENST00000480067 EPB41P11171 864 aaKnown RBP12.17□□□□□ -0.46
CLDN11-205ENST00000480067 MLH1P40692 756 aa12.17□□□□□ -0.46
CLDN11-205ENST00000480067 CASP4P49662 377 aa12.17□□□□□ -0.46
CLDN11-205ENST00000480067 ZNF445P59923 1031 aa12.17□□□□□ -0.46
CLDN11-205ENST00000480067 PPP2R3AQ06190 1150 aa12.17□□□□□ -0.46
CLDN11-205ENST00000480067 ENOX2Q16206 610 aaKnown RBP12.17□□□□□ -0.46
CLDN11-205ENST00000480067 SLC10A6Q3KNW5 377 aa12.17□□□□□ -0.46
CLDN11-205ENST00000480067 RASIP1Q5U651 963 aa12.17□□□□□ -0.46
CLDN11-205ENST00000480067 CHRDL2Q6WN34 429 aa12.17□□□□□ -0.46
CLDN11-205ENST00000480067 TMCO2Q7Z6W1 182 aaPredicted RBP12.17□□□□□ -0.46
CLDN11-205ENST00000480067 FILIP1Q7Z7B0 1213 aa12.17□□□□□ -0.46
CLDN11-205ENST00000480067 FAM186BQ8IYM0 893 aa12.17□□□□□ -0.46
CLDN11-205ENST00000480067 HELQQ8TDG4 1101 aa12.17□□□□□ -0.46
CLDN11-205ENST00000480067 MED15Q96RN5 788 aa12.17□□□□□ -0.46
CLDN11-205ENST00000480067 RPS6KC1Q96S38 1066 aa12.17□□□□□ -0.46
CLDN11-205ENST00000480067 YME1L1Q96TA2 773 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms