RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 CA14Q9ULX7 337 aa11.53□□□□□ -0.56
SMURF1-204ENST00000480055 PRG3Q9Y2Y8 225 aaPredicted RBP11.53□□□□□ -0.56
SMURF1-204ENST00000480055 CNTNAP2Q9UHC6 1331 aa11.53□□□□□ -0.56
SMURF1-204ENST00000480055 NID2Q14112 1375 aa11.53□□□□□ -0.56
SMURF1-204ENST00000480055 MAP1BP46821 2468 aaKnown RBP11.52□□□□□ -0.56
SMURF1-204ENST00000480055 ERLIN2O94905 339 aa11.52□□□□□ -0.57
SMURF1-204ENST00000480055 DEXIO95424 95 aa11.52□□□□□ -0.57
SMURF1-204ENST00000480055 PAPLNO95428 1278 aa11.52□□□□□ -0.57
SMURF1-204ENST00000480055 SOD2P04179 222 aa11.52□□□□□ -0.57
SMURF1-204ENST00000480055 ADH1AP07327 375 aa11.52□□□□□ -0.57
SMURF1-204ENST00000480055 SP9P0CG40 484 aa11.52□□□□□ -0.57
SMURF1-204ENST00000480055 ITGA4P13612 1032 aa11.52□□□□□ -0.57
SMURF1-204ENST00000480055 HSPA4P34932 840 aa11.52□□□□□ -0.57
SMURF1-204ENST00000480055 AFF1P51825 1210 aaKnown RBP11.52□□□□□ -0.57
SMURF1-204ENST00000480055 NCBP1Q09161 790 aaKnown RBP11.52□□□□□ -0.57
SMURF1-204ENST00000480055 INF2Q27J81 1249 aa11.52□□□□□ -0.57
SMURF1-204ENST00000480055 PHLDB3Q6NSJ2 640 aa11.52□□□□□ -0.57
SMURF1-204ENST00000480055 CENPQQ7L2Z9 268 aaPredicted RBP11.52□□□□□ -0.57
SMURF1-204ENST00000480055 SRGAP1Q7Z6B7 1085 aa11.52□□□□□ -0.57
SMURF1-204ENST00000480055 MRPL10Q7Z7H8 261 aaKnown RBP11.52□□□□□ -0.57
SMURF1-204ENST00000480055 SLC44A3Q8N4M1 653 aa11.52□□□□□ -0.57
SMURF1-204ENST00000480055 ETNPPLQ8TBG4 499 aa11.52□□□□□ -0.57
SMURF1-204ENST00000480055 RUBCNQ92622 972 aa11.52□□□□□ -0.57
SMURF1-204ENST00000480055 NXPE3Q969Y0 559 aa11.52□□□□□ -0.57
SMURF1-204ENST00000480055 HERC2P3Q9BVR0 1158 aa11.52□□□□□ -0.57
SMURF1-204ENST00000480055 FAM117AQ9C073 453 aa11.52□□□□□ -0.57
SMURF1-204ENST00000480055 CCDC194A0A1B0GVG4 234 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 EML1O00423 815 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 INPPL1O15357 1258 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 GLUD1P00367 558 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 P4HBP07237 508 aaKnown RBP11.51□□□□□ -0.57
SMURF1-204ENST00000480055 SPATA31D3P0C874 917 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 RFC5P40937 340 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 GLUD2P49448 558 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 LAMTOR4Q0VGL1 99 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 STK3Q13188 491 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 CPLX2Q6PUV4 134 aaKnown RBP11.51□□□□□ -0.57
SMURF1-204ENST00000480055 B3GNT9Q6UX72 402 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 SPATA31D4Q6ZUB0 917 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 OTUD6AQ7L8S5 288 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 TAS1R1Q7RTX1 841 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 KRT25Q7Z3Z0 450 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 FBXL16Q8N461 479 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 SUMF1Q8NBK3 374 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 RNF149Q8NC42 400 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 CNNM3Q8NE01 707 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 GPR152Q8TDT2 470 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 SPIRE2Q8WWL2 714 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 TCP11Q8WWU5 503 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 KCNB2Q92953 911 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 RPS6KC1Q96S38 1066 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 MYADMQ96S97 322 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 MTRQ99707 1265 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 HINFPQ9BQA5 517 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 APOL6Q9BWW8 343 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 MINDY3Q9H8M7 445 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 ARHGEF3Q9NR81 526 aa11.51□□□□□ -0.57
SMURF1-204ENST00000480055 TRIP11Q15643 1979 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 TEX28O15482 410 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 ASAP2O43150 1006 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 SLC37A4O43826 429 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 CCNT1O60563 726 aaKnown RBP11.5□□□□□ -0.57
SMURF1-204ENST00000480055 EFEMP2O95967 443 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 DCNP07585 359 aaKnown RBP11.5□□□□□ -0.57
SMURF1-204ENST00000480055 NCLP19338 710 aaKnown RBP11.5□□□□□ -0.57
SMURF1-204ENST00000480055 HOXA11P31270 313 aaPredicted RBP11.5□□□□□ -0.57
SMURF1-204ENST00000480055 YWHABP31946 246 aaKnown RBP11.5□□□□□ -0.57
SMURF1-204ENST00000480055 MLH1P40692 756 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 PPP2R5CQ13362 524 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 EMC2Q15006 297 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 XKR9Q5GH70 373 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 SPECC1Q5M775 1068 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 UBXN11Q5T124 520 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 NCAPH2Q6IBW4 605 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 GALNT17Q6IS24 598 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 BLOC1S3Q6QNY0 202 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 MOXD1Q6UVY6 613 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 RUFY3Q7L099 469 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 PALB2Q86YC2 1186 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 GLYCTKQ8IVS8 523 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 C1orf210Q8IVY1 113 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 RNF168Q8IYW5 571 aaPredicted RBP11.5□□□□□ -0.57
SMURF1-204ENST00000480055 DCLK2Q8N568 766 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 SMG7Q92540 1137 aaKnown RBP11.5□□□□□ -0.57
SMURF1-204ENST00000480055 ZNF707Q96C28 371 aaPredicted RBP11.5□□□□□ -0.57
SMURF1-204ENST00000480055 GAD1Q99259 594 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 COLEC11Q9BWP8 271 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 AGXT2Q9BYV1 514 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 TRIM6Q9C030 488 aaPredicted RBP11.5□□□□□ -0.57
SMURF1-204ENST00000480055 IL21Q9HBE4 155 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 SLC2A4RGQ9NR83 387 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 MARCH5Q9NX47 278 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 KCNJ14Q9UNX9 436 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 SIT1Q9Y3P8 196 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 PPME1Q9Y570 386 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 IPPQ9Y573 584 aa11.5□□□□□ -0.57
SMURF1-204ENST00000480055 PDCD11Q14690 1871 aaKnown RBP11.5□□□□□ -0.57
SMURF1-204ENST00000480055 COL4A2P08572 1712 aa11.49□□□□□ -0.57
SMURF1-204ENST00000480055 ARL5CA6NH57 179 aa11.49□□□□□ -0.57
SMURF1-204ENST00000480055 ANHXE9PGG2 379 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms