RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 RIN2Q8WYP3 895 aaPredicted RBP6.4□□□□□ -1.38
RFC4-212ENST00000479307 SLC7A6OSQ96CW6 309 aaPredicted RBP6.4□□□□□ -1.38
RFC4-212ENST00000479307 SLC12A5Q9H2X9 1139 aa6.4□□□□□ -1.38
RFC4-212ENST00000479307 JADE2Q9NQC1 790 aa6.4□□□□□ -1.38
RFC4-212ENST00000479307 DNM3Q9UQ16 869 aa6.4□□□□□ -1.38
RFC4-212ENST00000479307 CTDP1Q9Y5B0 961 aaPredicted RBP6.4□□□□□ -1.38
RFC4-212ENST00000479307 RPTORQ8N122 1335 aa6.4□□□□□ -1.39
RFC4-212ENST00000479307 NWD1Q149M9 1564 aa6.4□□□□□ -1.39
RFC4-212ENST00000479307 MTSS1O43312 755 aa6.39□□□□□ -1.39
RFC4-212ENST00000479307 NUAK1O60285 661 aa6.39□□□□□ -1.39
RFC4-212ENST00000479307 ENDOD1O94919 500 aa6.39□□□□□ -1.39
RFC4-212ENST00000479307 HNRNPLP14866 589 aaKnown RBP eCLIP6.39□□□□□ -1.39
RFC4-212ENST00000479307 PPP3CAQ08209 521 aa6.39□□□□□ -1.39
RFC4-212ENST00000479307 KIAA2012Q0VF49 1180 aa6.39□□□□□ -1.39
RFC4-212ENST00000479307 ADAM15Q13444 863 aa6.39□□□□□ -1.39
RFC4-212ENST00000479307 ZNF568Q3ZCX4 644 aa6.39□□□□□ -1.39
RFC4-212ENST00000479307 ATAT1Q5SQI0 421 aa6.39□□□□□ -1.39
RFC4-212ENST00000479307 CCSAPQ6IQ19 270 aaPredicted RBP6.39□□□□□ -1.39
RFC4-212ENST00000479307 USP30Q70CQ3 517 aa6.39□□□□□ -1.39
RFC4-212ENST00000479307 ADGRG2Q8IZP9 1017 aa6.39□□□□□ -1.39
RFC4-212ENST00000479307 PLA2G15Q8NCC3 412 aa6.39□□□□□ -1.39
RFC4-212ENST00000479307 PIK3C3Q8NEB9 887 aa6.39□□□□□ -1.39
RFC4-212ENST00000479307 SNX33Q8WV41 574 aa6.39□□□□□ -1.39
RFC4-212ENST00000479307 NRG4Q8WWG1 115 aa6.39□□□□□ -1.39
RFC4-212ENST00000479307 GCDHQ92947 438 aaPredicted RBP6.39□□□□□ -1.39
RFC4-212ENST00000479307 HDAC10Q969S8 669 aa6.39□□□□□ -1.39
RFC4-212ENST00000479307 MBD6Q96DN6 1003 aa6.39□□□□□ -1.39
RFC4-212ENST00000479307 PRDM11Q9NQV5 511 aa6.39□□□□□ -1.39
RFC4-212ENST00000479307 SERPINB13Q9UIV8 391 aa6.39□□□□□ -1.39
RFC4-212ENST00000479307 RCAN3Q9UKA8 241 aa6.39□□□□□ -1.39
RFC4-212ENST00000479307 IPPQ9Y573 584 aa6.39□□□□□ -1.39
RFC4-212ENST00000479307 TROQ12816 1431 aaPredicted RBP6.39□□□□□ -1.39
RFC4-212ENST00000479307 AHDC1Q5TGY3 1603 aaPredicted RBP6.39□□□□□ -1.39
RFC4-212ENST00000479307 UBR1Q8IWV7 1749 aa6.39□□□□□ -1.39
RFC4-212ENST00000479307 A0A1B0GTL3 188 aa6.38□□□□□ -1.39
RFC4-212ENST00000479307 MROH6A6NGR9 719 aa6.38□□□□□ -1.39
RFC4-212ENST00000479307 HTRA2O43464 458 aaPredicted RBP6.38□□□□□ -1.39
RFC4-212ENST00000479307 PRAMEF4O60810 478 aa6.38□□□□□ -1.39
RFC4-212ENST00000479307 RPLP2P05387 115 aaKnown RBP6.38□□□□□ -1.39
RFC4-212ENST00000479307 GSPT1P15170 499 aaKnown RBP6.38□□□□□ -1.39
RFC4-212ENST00000479307 PDCP20941 246 aa6.38□□□□□ -1.39
RFC4-212ENST00000479307 MST1LQ2TV78 715 aa6.38□□□□□ -1.39
RFC4-212ENST00000479307 LILRA6Q6PI73 481 aa6.38□□□□□ -1.39
RFC4-212ENST00000479307 PRR18Q8N4B5 295 aa6.38□□□□□ -1.39
RFC4-212ENST00000479307 TP53I13Q8NBR0 393 aaPredicted RBP6.38□□□□□ -1.39
RFC4-212ENST00000479307 SLC35G2Q8TBE7 412 aa6.38□□□□□ -1.39
RFC4-212ENST00000479307 HPS3Q969F9 1004 aa6.38□□□□□ -1.39
RFC4-212ENST00000479307 MAP3K14Q99558 947 aa6.38□□□□□ -1.39
RFC4-212ENST00000479307 GTPBP4Q9BZE4 634 aaKnown RBP6.38□□□□□ -1.39
RFC4-212ENST00000479307 KIAA1683Q9H0B3 1180 aa6.38□□□□□ -1.39
RFC4-212ENST00000479307 DMRT3Q9NQL9 472 aa6.38□□□□□ -1.39
RFC4-212ENST00000479307 FAM184BQ9ULE4 1060 aa6.38□□□□□ -1.39
RFC4-212ENST00000479307 ABCC3O15438 1527 aa6.38□□□□□ -1.39
RFC4-212ENST00000479307 SYCP2Q9BX26 1530 aa6.38□□□□□ -1.39
RFC4-212ENST00000479307 DIP2AQ14689 1571 aa6.38□□□□□ -1.39
RFC4-212ENST00000479307 LRRIQ1Q96JM4 1722 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 SCAF11Q99590 1463 aaKnown RBP6.37□□□□□ -1.39
RFC4-212ENST00000479307 MIA2Q96PC5 1412 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 C2orf78A6NCI8 922 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 CCDC154A6NI56 674 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 AKR1B10O60218 316 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 ALDH1A2O94788 518 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 ZNF888P0CJ79 500 aaPredicted RBP6.37□□□□□ -1.39
RFC4-212ENST00000479307 KIR2DL3P43628 341 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 SLURP1P55000 103 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 RRADP55042 308 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 NFYCQ13952 458 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 NOMO1Q15155 1222 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 UBE3CQ15386 1083 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 GAGE13Q4V321 117 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 PPP4R3AQ6IN85 833 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 BORAQ6PGQ7 559 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 B3GNT9Q6UX72 402 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 MARCH10Q8NA82 808 aaPredicted RBP6.37□□□□□ -1.39
RFC4-212ENST00000479307 ZNF480Q8WV37 535 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 LRGUKQ96M69 825 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 C7orf25Q9BPX7 421 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 SLC6A15Q9H2J7 730 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 MSL2Q9HCI7 577 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 ANLNQ9NQW6 1124 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 INTUQ9ULD6 942 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 LIMCH1Q9UPQ0 1083 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 ZDHHC9Q9Y397 364 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 CFAP20Q9Y6A4 193 aaKnown RBP6.37□□□□□ -1.39
RFC4-212ENST00000479307 UTRNP46939 3433 aa6.37□□□□□ -1.39
RFC4-212ENST00000479307 KDM5AP29375 1690 aaKnown RBP6.36□□□□□ -1.39
RFC4-212ENST00000479307 SLIT1O75093 1534 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 PRDM15P57071 1507 aaPredicted RBP6.36□□□□□ -1.39
RFC4-212ENST00000479307 CLIP1P30622 1438 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 TMEM94Q12767 1356 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 PMS2P1A4D2B8 440 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 VSTM5A8MXK1 200 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 NRP1O14786 923 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 AP1G1O43747 822 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 SGTAO43765 313 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 CAND2O75155 1236 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 GASTP01350 101 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 JUNP05412 331 aaKnown RBP6.36□□□□□ -1.39
RFC4-212ENST00000479307 VSIG10L2P0DP72 767 aa6.36□□□□□ -1.39
RFC4-212ENST00000479307 EDNRBP24530 442 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms