RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 MYADMQ96S97 322 aa14.65□□□□□ -0.06
VCL-205ENST00000478896 RHOBTB2Q9BYZ6 727 aa14.65□□□□□ -0.06
VCL-205ENST00000478896 NT5C3AQ9H0P0 336 aa14.65□□□□□ -0.06
VCL-205ENST00000478896 C2orf40Q9H1Z8 148 aa14.65□□□□□ -0.06
VCL-205ENST00000478896 TMEM60Q9H2L4 133 aa14.65□□□□□ -0.06
VCL-205ENST00000478896 FNIP2Q9P278 1114 aa14.65□□□□□ -0.06
VCL-205ENST00000478896 EPS15L1Q9UBC2 864 aa14.65□□□□□ -0.06
VCL-205ENST00000478896 DOCK8Q8NF50 2099 aa14.65□□□□□ -0.06
VCL-205ENST00000478896 ARHGEF35A5YM69 484 aa14.64□□□□□ -0.07
VCL-205ENST00000478896 PRR23AA6NEV1 266 aa14.64□□□□□ -0.07
VCL-205ENST00000478896 PI15O43692 258 aa14.64□□□□□ -0.07
VCL-205ENST00000478896 MED24O75448 989 aa14.64□□□□□ -0.07
VCL-205ENST00000478896 SPATA31C1P0DKV0 1188 aa14.64□□□□□ -0.07
VCL-205ENST00000478896 NPR3P17342 541 aa14.64□□□□□ -0.07
VCL-205ENST00000478896 NEK4P51957 841 aa14.64□□□□□ -0.07
VCL-205ENST00000478896 GUCY1B3Q02153 619 aa14.64□□□□□ -0.07
VCL-205ENST00000478896 TUSC3Q13454 348 aa14.64□□□□□ -0.07
VCL-205ENST00000478896 PRPF4BQ13523 1007 aaKnown RBP14.64□□□□□ -0.07
VCL-205ENST00000478896 MAPK6Q16659 721 aa14.64□□□□□ -0.07
VCL-205ENST00000478896 RTP2Q5QGT7 225 aa14.64□□□□□ -0.07
VCL-205ENST00000478896 LIN9Q5TKA1 542 aa14.64□□□□□ -0.07
VCL-205ENST00000478896 CDCA2Q69YH5 1023 aaPredicted RBP14.64□□□□□ -0.07
VCL-205ENST00000478896 POTEGQ6S5H5 508 aa14.64□□□□□ -0.07
VCL-205ENST00000478896 PRSS55Q6UWB4 352 aaPredicted RBP14.64□□□□□ -0.07
VCL-205ENST00000478896 CCDC105Q8IYK2 499 aa14.64□□□□□ -0.07
VCL-205ENST00000478896 GPR65Q8IYL9 337 aa14.64□□□□□ -0.07
VCL-205ENST00000478896 DEPTORQ8TB45 409 aa14.64□□□□□ -0.07
VCL-205ENST00000478896 NKD2Q969F2 451 aaPredicted RBP14.64□□□□□ -0.07
VCL-205ENST00000478896 ZNF707Q96C28 371 aaPredicted RBP14.64□□□□□ -0.07
VCL-205ENST00000478896 NACC1Q96RE7 527 aa14.64□□□□□ -0.07
VCL-205ENST00000478896 PAAF1Q9BRP4 392 aa14.64□□□□□ -0.07
VCL-205ENST00000478896 PRKD2Q9BZL6 878 aa14.64□□□□□ -0.07
VCL-205ENST00000478896 SNTG2Q9NY99 539 aa14.64□□□□□ -0.07
VCL-205ENST00000478896 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.64□□□□□ -0.077e-6■■■■□ 20.5
VCL-205ENST00000478896 WNT16Q9UBV4 365 aa14.64□□□□□ -0.07
VCL-205ENST00000478896 CA14Q9ULX7 337 aa14.64□□□□□ -0.07
VCL-205ENST00000478896 RECQL4O94761 1208 aa14.63□□□□□ -0.07
VCL-205ENST00000478896 KIF4AO95239 1232 aa14.63□□□□□ -0.07
VCL-205ENST00000478896 C1RP00736 705 aa14.63□□□□□ -0.07
VCL-205ENST00000478896 PRKCBP05771 671 aa14.63□□□□□ -0.07
VCL-205ENST00000478896 THP07101 528 aa14.63□□□□□ -0.07
VCL-205ENST00000478896 OR52Z1P0C646 297 aa14.63□□□□□ -0.07
VCL-205ENST00000478896 SRFP11831 508 aa14.63□□□□□ -0.07
VCL-205ENST00000478896 GNL2Q13823 731 aaKnown RBP14.63□□□□□ -0.07
VCL-205ENST00000478896 ANGPT1Q15389 498 aa14.63□□□□□ -0.07
VCL-205ENST00000478896 FAM187BQ17R55 369 aa14.63□□□□□ -0.07
VCL-205ENST00000478896 FAM171A1Q5VUB5 890 aa14.63□□□□□ -0.07
VCL-205ENST00000478896 HAUS3Q68CZ6 603 aa14.63□□□□□ -0.07
VCL-205ENST00000478896 FRMD5Q7Z6J6 570 aa14.63□□□□□ -0.07
VCL-205ENST00000478896 NXPE3Q969Y0 559 aa14.63□□□□□ -0.07
VCL-205ENST00000478896 TTPALQ9BTX7 342 aa14.63□□□□□ -0.07
VCL-205ENST00000478896 PDZD7Q9H5P4 517 aa14.63□□□□□ -0.07
VCL-205ENST00000478896 EIF5BO60841 1220 aaKnown RBP14.62□□□□□ -0.07
VCL-205ENST00000478896 ZMYND10O75800 440 aa14.62□□□□□ -0.07
VCL-205ENST00000478896 NAMPTP43490 491 aa14.62□□□□□ -0.07
VCL-205ENST00000478896 ELAVL2Q12926 359 aaKnown RBP14.62□□□□□ -0.07
VCL-205ENST00000478896 PPP2R5AQ15172 486 aa14.62□□□□□ -0.07
VCL-205ENST00000478896 ZNF174Q15697 407 aa14.62□□□□□ -0.07
VCL-205ENST00000478896 PSMD5Q16401 504 aa14.62□□□□□ -0.07
VCL-205ENST00000478896 PPM1LQ5SGD2 360 aa14.62□□□□□ -0.07
VCL-205ENST00000478896 PADI6Q6TGC4 694 aa14.62□□□□□ -0.07
VCL-205ENST00000478896 NOSTRINQ8IVI9 506 aa14.62□□□□□ -0.07
VCL-205ENST00000478896 SLC44A3Q8N4M1 653 aa14.62□□□□□ -0.07
VCL-205ENST00000478896 DTWD2Q8NBA8 298 aa14.62□□□□□ -0.07
VCL-205ENST00000478896 BSNDQ8WZ55 320 aa14.62□□□□□ -0.07
VCL-205ENST00000478896 C8orf76Q96K31 380 aa14.62□□□□□ -0.07
VCL-205ENST00000478896 POLR3CQ9BUI4 534 aaPredicted RBP14.62□□□□□ -0.07
VCL-205ENST00000478896 FZD8Q9H461 694 aa14.62□□□□□ -0.07
VCL-205ENST00000478896 FBXW11Q9UKB1 542 aa14.62□□□□□ -0.07
VCL-205ENST00000478896 POLIQ9UNA4 740 aa14.62□□□□□ -0.07
VCL-205ENST00000478896 GDAQ9Y2T3 454 aa14.62□□□□□ -0.07
VCL-205ENST00000478896 VWA8A3KMH1 1905 aa14.62□□□□□ -0.07
VCL-205ENST00000478896 MYH15Q9Y2K3 1946 aa14.61□□□□□ -0.07
VCL-205ENST00000478896 KRBA1A5PL33 1030 aa14.61□□□□□ -0.07
VCL-205ENST00000478896 TTLL13PA6NNM8 815 aa14.61□□□□□ -0.07
VCL-205ENST00000478896 PTGESO14684 152 aa14.61□□□□□ -0.07
VCL-205ENST00000478896 C8AP07357 584 aa14.61□□□□□ -0.07
VCL-205ENST00000478896 LAMP2P13473 410 aa14.61□□□□□ -0.07
VCL-205ENST00000478896 FSHRP23945 695 aa14.61□□□□□ -0.07
VCL-205ENST00000478896 RPA1P27694 616 aa14.61□□□□□ -0.07
VCL-205ENST00000478896 DCAF4L1Q3SXM0 396 aa14.61□□□□□ -0.07
VCL-205ENST00000478896 LILRA6Q6PI73 481 aa14.61□□□□□ -0.07
VCL-205ENST00000478896 CCDC83Q8IWF9 413 aa14.61□□□□□ -0.07
VCL-205ENST00000478896 ST13P5Q8NFI4 369 aaPredicted RBP14.61□□□□□ -0.07
VCL-205ENST00000478896 GPR152Q8TDT2 470 aa14.61□□□□□ -0.07
VCL-205ENST00000478896 PIK3R5Q8WYR1 880 aa14.61□□□□□ -0.07
VCL-205ENST00000478896 IFT74Q96LB3 600 aa14.61□□□□□ -0.07
VCL-205ENST00000478896 KIFC3Q9BVG8 833 aa14.61□□□□□ -0.07
VCL-205ENST00000478896 TBC1D17Q9HA65 648 aa14.61□□□□□ -0.07
VCL-205ENST00000478896 USP20Q9Y2K6 914 aa14.61□□□□□ -0.07
VCL-205ENST00000478896 NUMBLQ9Y6R0 609 aa14.61□□□□□ -0.07
VCL-205ENST00000478896 CACNA1HO95180 2353 aa14.61□□□□□ -0.07
VCL-205ENST00000478896 ACKR2O00590 384 aa14.6□□□□□ -0.07
VCL-205ENST00000478896 CYP11B2P19099 503 aa14.6□□□□□ -0.07
VCL-205ENST00000478896 CCT6AP40227 531 aaKnown RBP14.6□□□□□ -0.07
VCL-205ENST00000478896 ST3GAL1Q11201 340 aa14.6□□□□□ -0.07
VCL-205ENST00000478896 ORC2Q13416 577 aaPredicted RBP14.6□□□□□ -0.07
VCL-205ENST00000478896 GLRA4Q5JXX5 417 aa14.6□□□□□ -0.07
VCL-205ENST00000478896 SPECC1Q5M775 1068 aa14.6□□□□□ -0.07
VCL-205ENST00000478896 TTC38Q5R3I4 469 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms