RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 ZDHHC9Q9Y397 364 aa16.11■□□□□ 0.17
USP11-207ENST00000478596 PCDHB6Q9Y5E3 794 aa16.11■□□□□ 0.17
USP11-207ENST00000478596 FAM86B1E9PN63 330 aa16.1■□□□□ 0.17
USP11-207ENST00000478596 SLC37A4O43826 429 aa16.1■□□□□ 0.17
USP11-207ENST00000478596 FAM86B2P0C5J1 330 aa16.1■□□□□ 0.17
USP11-207ENST00000478596 PHKA2P46019 1235 aa16.1■□□□□ 0.17
USP11-207ENST00000478596 DNM1Q05193 864 aaKnown RBP16.1■□□□□ 0.17
USP11-207ENST00000478596 ITGB3BPQ13352 177 aaPredicted RBP16.1■□□□□ 0.17
USP11-207ENST00000478596 SF3A1Q15459 793 aaKnown RBP16.1■□□□□ 0.17
USP11-207ENST00000478596 PPP4R3AQ6IN85 833 aa16.1■□□□□ 0.17
USP11-207ENST00000478596 ABHD15Q6UXT9 468 aa16.1■□□□□ 0.17
USP11-207ENST00000478596 ZNF577Q9BSK1 485 aa16.1■□□□□ 0.17
USP11-207ENST00000478596 PRKD2Q9BZL6 878 aa16.1■□□□□ 0.17
USP11-207ENST00000478596 CFAP45Q9UL16 551 aa16.1■□□□□ 0.17
USP11-207ENST00000478596 TMEM8BA6NDV4 472 aa16.09■□□□□ 0.17
USP11-207ENST00000478596 DDX39AO00148 427 aaKnown RBP16.09■□□□□ 0.17
USP11-207ENST00000478596 BACH1O14867 736 aa16.09■□□□□ 0.17
USP11-207ENST00000478596 B4GALT3O60512 393 aa16.09■□□□□ 0.17
USP11-207ENST00000478596 CCNE2O96020 404 aa16.09■□□□□ 0.17
USP11-207ENST00000478596 SOD2P04179 222 aa16.09■□□□□ 0.17
USP11-207ENST00000478596 URODP06132 367 aa16.09■□□□□ 0.17
USP11-207ENST00000478596 OR52Z1P0C646 297 aa16.09■□□□□ 0.17
USP11-207ENST00000478596 DARSP14868 501 aaKnown RBP16.09■□□□□ 0.17
USP11-207ENST00000478596 ATP4AP20648 1035 aa16.09■□□□□ 0.17
USP11-207ENST00000478596 CIITAP33076 1130 aa16.09■□□□□ 0.17
USP11-207ENST00000478596 RNASELQ05823 741 aaKnown RBP16.09■□□□□ 0.17
USP11-207ENST00000478596 PPP2R5DQ14738 602 aa16.09■□□□□ 0.17
USP11-207ENST00000478596 PDXDC2PQ6P474 469 aa16.09■□□□□ 0.17
USP11-207ENST00000478596 PRR23BQ6ZRT6 265 aa16.09■□□□□ 0.17
USP11-207ENST00000478596 MTSS1LQ765P7 747 aa16.09■□□□□ 0.17
USP11-207ENST00000478596 NIPA1Q7RTP0 329 aa16.09■□□□□ 0.17
USP11-207ENST00000478596 CCDC60Q8IWA6 550 aaPredicted RBP16.09■□□□□ 0.17
USP11-207ENST00000478596 LINC01465Q8N7H1 131 aa16.09■□□□□ 0.17
USP11-207ENST00000478596 RXFP1Q9HBX9 757 aa16.09■□□□□ 0.17
USP11-207ENST00000478596 CHST12Q9NRB3 414 aa16.09■□□□□ 0.17
USP11-207ENST00000478596 CDH7Q9ULB5 785 aa16.09■□□□□ 0.17
USP11-207ENST00000478596 WDFY3Q8IZQ1 3526 aa16.09■□□□□ 0.17
USP11-207ENST00000478596 ASH1LQ9NR48 2969 aaKnown RBP16.08■□□□□ 0.17
USP11-207ENST00000478596 WNT7AO00755 349 aa16.08■□□□□ 0.16
USP11-207ENST00000478596 MAGEB2O15479 319 aa16.08■□□□□ 0.16
USP11-207ENST00000478596 GAS7O60861 476 aa16.08■□□□□ 0.16
USP11-207ENST00000478596 OFD1O75665 1012 aa16.08■□□□□ 0.16
USP11-207ENST00000478596 SKIP12755 728 aa16.08■□□□□ 0.16
USP11-207ENST00000478596 FSHRP23945 695 aa16.08■□□□□ 0.16
USP11-207ENST00000478596 TOB1P50616 345 aaPredicted RBP16.08■□□□□ 0.16
USP11-207ENST00000478596 CLCN3P51790 818 aa16.08■□□□□ 0.16
USP11-207ENST00000478596 ADCY1Q08828 1119 aa16.08■□□□□ 0.16
USP11-207ENST00000478596 Q4G0T1 1027 aa16.08■□□□□ 0.16
USP11-207ENST00000478596 LRCH2Q5VUJ6 765 aa16.08■□□□□ 0.16
USP11-207ENST00000478596 ATL3Q6DD88 541 aa16.08■□□□□ 0.16
USP11-207ENST00000478596 ZNF852Q6ZMS4 543 aa16.08■□□□□ 0.16
USP11-207ENST00000478596 ZNF280BQ86YH2 543 aa16.08■□□□□ 0.16
USP11-207ENST00000478596 SLFN12Q8IYM2 578 aa16.08■□□□□ 0.16
USP11-207ENST00000478596 CRYGNQ8WXF5 182 aa16.08■□□□□ 0.16
USP11-207ENST00000478596 SPATA32Q96LK8 384 aa16.08■□□□□ 0.16
USP11-207ENST00000478596 USP28Q96RU2 1077 aa16.08■□□□□ 0.16
USP11-207ENST00000478596 MAP7D2Q96T17 732 aa16.08■□□□□ 0.16
USP11-207ENST00000478596 IER2Q9BTL4 223 aa16.08■□□□□ 0.16
USP11-207ENST00000478596 TEKT3Q9BXF9 490 aa16.08■□□□□ 0.16
USP11-207ENST00000478596 AGO4Q9HCK5 861 aaKnown RBP16.08■□□□□ 0.16
USP11-207ENST00000478596 ZNF302Q9NR11 478 aa16.08■□□□□ 0.16
USP11-207ENST00000478596 TFIP11Q9UBB9 837 aaKnown RBP16.08■□□□□ 0.16
USP11-207ENST00000478596 AKT3Q9Y243 479 aa16.08■□□□□ 0.16
USP11-207ENST00000478596 MRPS17Q9Y2R5 130 aaKnown RBP16.08■□□□□ 0.16
USP11-207ENST00000478596 CLIC4Q9Y696 253 aa16.08■□□□□ 0.16
USP11-207ENST00000478596 IGLV3-22A0A075B6J6 115 aa16.07■□□□□ 0.16
USP11-207ENST00000478596 IPO5O00410 1097 aaKnown RBP16.07■□□□□ 0.16
USP11-207ENST00000478596 C2CD2LO14523 706 aa16.07■□□□□ 0.16
USP11-207ENST00000478596 CHMP2AO43633 222 aa16.07■□□□□ 0.16
USP11-207ENST00000478596 PTGDRQ13258 359 aa16.07■□□□□ 0.16
USP11-207ENST00000478596 SIM2Q14190 667 aaPredicted RBP16.07■□□□□ 0.16
USP11-207ENST00000478596 TPRG1Q6ZUI0 275 aa16.07■□□□□ 0.16
USP11-207ENST00000478596 LPPQ93052 612 aa16.07■□□□□ 0.16
USP11-207ENST00000478596 GBP4Q96PP9 640 aa16.07■□□□□ 0.16
USP11-207ENST00000478596 TMEM175Q9BSA9 504 aa16.07■□□□□ 0.16
USP11-207ENST00000478596 HERC2P3Q9BVR0 1158 aa16.07■□□□□ 0.16
USP11-207ENST00000478596 TMEM121BQ9BXQ6 578 aaPredicted RBP16.07■□□□□ 0.16
USP11-207ENST00000478596 GBP3Q9H0R5 595 aa16.07■□□□□ 0.16
USP11-207ENST00000478596 CHRDQ9H2X0 955 aa16.07■□□□□ 0.16
USP11-207ENST00000478596 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.07■□□□□ 0.16
USP11-207ENST00000478596 INPP5FQ9Y2H2 1132 aa16.07■□□□□ 0.16
USP11-207ENST00000478596 MYH9P35579 1960 aaKnown RBP16.06■□□□□ 0.16
USP11-207ENST00000478596 CYP3A7-CYP3A51PA0A087WV96 503 aa16.06■□□□□ 0.16
USP11-207ENST00000478596 SRRM3A6NNA2 597 aaPredicted RBP16.06■□□□□ 0.16
USP11-207ENST00000478596 MEIS1O00470 390 aa16.06■□□□□ 0.16
USP11-207ENST00000478596 LAD1O00515 517 aa16.06■□□□□ 0.16
USP11-207ENST00000478596 MSH4O15457 936 aa16.06■□□□□ 0.16
USP11-207ENST00000478596 ZNF623O75123 536 aa16.06■□□□□ 0.16
USP11-207ENST00000478596 ALDH2P05091 517 aa16.06■□□□□ 0.16
USP11-207ENST00000478596 MYBP10242 640 aa16.06■□□□□ 0.16
USP11-207ENST00000478596 CYP3A7P24462 503 aa16.06■□□□□ 0.16
USP11-207ENST00000478596 TMOD1P28289 359 aa16.06■□□□□ 0.16
USP11-207ENST00000478596 TXKP42681 527 aa16.06■□□□□ 0.16
USP11-207ENST00000478596 GPC3P51654 580 aa16.06■□□□□ 0.16
USP11-207ENST00000478596 RING1Q06587 406 aa16.06■□□□□ 0.16
USP11-207ENST00000478596 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.06■□□□□ 0.16
USP11-207ENST00000478596 RNF168Q8IYW5 571 aaPredicted RBP16.06■□□□□ 0.16
USP11-207ENST00000478596 ZNF687Q8N1G0 1237 aa16.06■□□□□ 0.16
USP11-207ENST00000478596 RAB34Q9BZG1 259 aa16.06■□□□□ 0.16
USP11-207ENST00000478596 LHX6Q9UPM6 363 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms