RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 TERF2Q15554 542 aa5.4□□□□□ -1.54
CDC42BPA-212ENST00000478573 HECTD2Q5U5R9 776 aa5.4□□□□□ -1.54
CDC42BPA-212ENST00000478573 CLRN3Q8NCR9 226 aa5.4□□□□□ -1.54
CDC42BPA-212ENST00000478573 MTMR8Q96EF0 704 aa5.4□□□□□ -1.54
CDC42BPA-212ENST00000478573 FDXACB1Q9BRP7 624 aaPredicted RBP5.4□□□□□ -1.54
CDC42BPA-212ENST00000478573 LSM14BQ9BX40 385 aaKnown RBP5.4□□□□□ -1.54
CDC42BPA-212ENST00000478573 RIOX1Q9H6W3 641 aa5.4□□□□□ -1.54
CDC42BPA-212ENST00000478573 SPON1Q9HCB6 807 aa5.4□□□□□ -1.54
CDC42BPA-212ENST00000478573 USP36Q9P275 1121 aaKnown RBP5.4□□□□□ -1.54
CDC42BPA-212ENST00000478573 TRHDEQ9UKU6 1024 aa5.4□□□□□ -1.54
CDC42BPA-212ENST00000478573 EID1Q9Y6B2 187 aa5.4□□□□□ -1.54
CDC42BPA-212ENST00000478573 RSF1Q96T23 1441 aaPredicted RBP5.4□□□□□ -1.55
CDC42BPA-212ENST00000478573 WDR62O43379 1518 aa5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 NESP48681 1621 aa5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 GRID2IPA4D2P6 1211 aa5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 AHRRA9YTQ3 701 aa5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 PRR5-ARHGAP8B1AHC4 643 aa5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 GABRDO14764 452 aa5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 PRAMEF4O60810 478 aa5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 SEC24DO94855 1032 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 LMNAP02545 664 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 ZFP36P26651 326 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 NEK2P51955 445 aa5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 WNT3AP56704 352 aa5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 FAM189BP81408 668 aa5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 MCL1Q07820 350 aa5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 MRPL49Q13405 166 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 DDB1Q16531 1140 aa5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 INAVAQ3KP66 663 aa5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 TAS1R1Q7RTX1 841 aa5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 ZNF610Q8N9Z0 462 aa5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 BEND2Q8NDZ0 799 aa5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 PDCD2LQ9BRP1 358 aa5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 SLC46A2Q9BY10 475 aa5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 ANO3Q9BYT9 981 aa5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 CCDC8Q9H0W5 538 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 CHPF2Q9P2E5 772 aa5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 ANKFY1Q9P2R3 1169 aa5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 HS3ST4Q9Y661 456 aa5.39□□□□□ -1.55
CDC42BPA-212ENST00000478573 CENPVL1A0A0U1RR11 272 aa5.38□□□□□ -1.55
CDC42BPA-212ENST00000478573 PRSS38A1L453 326 aa5.38□□□□□ -1.55
CDC42BPA-212ENST00000478573 NCR1O76036 304 aa5.38□□□□□ -1.55
CDC42BPA-212ENST00000478573 CLEC2LP0C7M8 214 aa5.38□□□□□ -1.55
CDC42BPA-212ENST00000478573 LSP1P33241 339 aa5.38□□□□□ -1.55
CDC42BPA-212ENST00000478573 ADRA1BP35368 520 aa5.38□□□□□ -1.55
CDC42BPA-212ENST00000478573 NFE2Q16621 373 aaPredicted RBP5.38□□□□□ -1.55
CDC42BPA-212ENST00000478573 CCDC181Q5TID7 509 aa5.38□□□□□ -1.55
CDC42BPA-212ENST00000478573 BROXQ5VW32 411 aa5.38□□□□□ -1.55
CDC42BPA-212ENST00000478573 GDF7Q7Z4P5 450 aa5.38□□□□□ -1.55
CDC42BPA-212ENST00000478573 HDGFL2Q7Z4V5 671 aaPredicted RBP5.38□□□□□ -1.55
CDC42BPA-212ENST00000478573 RASSF3Q86WH2 238 aa5.38□□□□□ -1.55
CDC42BPA-212ENST00000478573 GLB1L2Q8IW92 636 aa5.38□□□□□ -1.55
CDC42BPA-212ENST00000478573 CBARPQ8N350 705 aaPredicted RBP5.38□□□□□ -1.55
CDC42BPA-212ENST00000478573 LILRA3Q8N6C8 439 aaPredicted RBP5.38□□□□□ -1.55
CDC42BPA-212ENST00000478573 CHMP4CQ96CF2 233 aa5.38□□□□□ -1.55
CDC42BPA-212ENST00000478573 VTA1Q9NP79 307 aa5.38□□□□□ -1.55
CDC42BPA-212ENST00000478573 LEFTY2O00292 366 aa5.37□□□□□ -1.55
CDC42BPA-212ENST00000478573 RNASE9P60153 205 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-212ENST00000478573 METTL24Q5JXM2 366 aa5.37□□□□□ -1.55
CDC42BPA-212ENST00000478573 DOK3Q7L591 496 aa5.37□□□□□ -1.55
CDC42BPA-212ENST00000478573 LCORLQ8N3X6 602 aa5.37□□□□□ -1.55
CDC42BPA-212ENST00000478573 SUPT20HQ8NEM7 779 aa5.37□□□□□ -1.55
CDC42BPA-212ENST00000478573 MYEOVQ96EZ4 313 aa5.37□□□□□ -1.55
CDC42BPA-212ENST00000478573 AHCYL2Q96HN2 611 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-212ENST00000478573 CAMKK2Q96RR4 588 aa5.37□□□□□ -1.55
CDC42BPA-212ENST00000478573 DCLRE1CQ96SD1 692 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-212ENST00000478573 CDC5LQ99459 802 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-212ENST00000478573 SLC13A1Q9BZW2 595 aa5.37□□□□□ -1.55
CDC42BPA-212ENST00000478573 AKIP1Q9NQ31 210 aa5.37□□□□□ -1.55
CDC42BPA-212ENST00000478573 TCEAL9Q9UHQ7 104 aa5.37□□□□□ -1.55
CDC42BPA-212ENST00000478573 PPP2R3BQ9Y5P8 575 aa5.37□□□□□ -1.55
CDC42BPA-212ENST00000478573 PDS5BQ9NTI5 1447 aa5.37□□□□□ -1.55
CDC42BPA-212ENST00000478573 A0A1W2PR48 441 aa5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 E2F8A0AVK6 867 aa5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 RNASET2O00584 256 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 NDUFA10O95299 355 aa5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 GPR15P49685 360 aa5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 USP14P54578 494 aa5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 KRT85P78386 507 aa5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 APBA1Q02410 837 aa5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 NHLH2Q02577 135 aa5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 KLF1Q13351 362 aaPredicted RBP5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 UBE3CQ15386 1083 aa5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 CCDC62Q6P9F0 684 aa5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 Q6YL49 198 aa5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 RAVER1Q8IY67 606 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 OR10H5Q8NGA6 315 aa5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 SMAD5Q99717 465 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 WDR11Q9BZH6 1224 aa5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 SERHL2Q9H4I8 314 aa5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 POGKQ9P215 609 aa5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 PTGFRNQ9P2B2 879 aa5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 EVLQ9UI08 416 aaPredicted RBP5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 TNKSO95271 1327 aa5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 CFTRP13569 1480 aa5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 MRC2Q9UBG0 1479 aa5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 CEP164Q9UPV0 1460 aa5.36□□□□□ -1.55
CDC42BPA-212ENST00000478573 ZMYM3Q14202 1370 aa5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 SHTN1A0MZ66 631 aa5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 TRIM75PA6NK02 468 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms