RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 ATP2A2P16615 1042 aaKnown RBP5.02□□□□□ -1.61
NCKAP1-204ENST00000477988 ZNF81P51508 661 aa5.02□□□□□ -1.61
NCKAP1-204ENST00000477988 MGAT5Q09328 741 aa5.02□□□□□ -1.61
NCKAP1-204ENST00000477988 CFAP100Q494V2 611 aa5.02□□□□□ -1.61
NCKAP1-204ENST00000477988 ZBTB41Q5SVQ8 909 aa5.02□□□□□ -1.61
NCKAP1-204ENST00000477988 GPR158Q5T848 1215 aa5.02□□□□□ -1.61
NCKAP1-204ENST00000477988 AGAP9Q5VTM2 703 aa5.02□□□□□ -1.61
NCKAP1-204ENST00000477988 KIF18BQ86Y91 864 aa5.02□□□□□ -1.61
NCKAP1-204ENST00000477988 WNT8AQ9H1J5 351 aa5.02□□□□□ -1.61
NCKAP1-204ENST00000477988 IGSF5Q9NSI5 407 aa5.02□□□□□ -1.61
NCKAP1-204ENST00000477988 IFT57Q9NWB7 429 aa5.02□□□□□ -1.61
NCKAP1-204ENST00000477988 NUMBLQ9Y6R0 609 aa5.02□□□□□ -1.61
NCKAP1-204ENST00000477988 CGB1A6NKQ9 187 aa5.01□□□□□ -1.61
NCKAP1-204ENST00000477988 KCNAB3O43448 404 aa5.01□□□□□ -1.61
NCKAP1-204ENST00000477988 GTF2F1P35269 517 aaKnown RBP eCLIP5.01□□□□□ -1.61
NCKAP1-204ENST00000477988 Q6ZNX1 250 aa5.01□□□□□ -1.61
NCKAP1-204ENST00000477988 GPR149Q86SP6 731 aa5.01□□□□□ -1.61
NCKAP1-204ENST00000477988 RHOT2Q8IXI1 618 aa5.01□□□□□ -1.61
NCKAP1-204ENST00000477988 ZNF496Q96IT1 587 aaPredicted RBP5.01□□□□□ -1.61
NCKAP1-204ENST00000477988 Q96MF0 132 aa5.01□□□□□ -1.61
NCKAP1-204ENST00000477988 MSRAQ9UJ68 235 aa5.01□□□□□ -1.61
NCKAP1-204ENST00000477988 DRGXA6NNA5 263 aa5□□□□□ -1.61
NCKAP1-204ENST00000477988 PJA2O43164 708 aa5□□□□□ -1.61
NCKAP1-204ENST00000477988 ITGA10O75578 1167 aa5□□□□□ -1.61
NCKAP1-204ENST00000477988 SOGA3Q5TF21 947 aa5□□□□□ -1.61
NCKAP1-204ENST00000477988 ARHGEF25Q86VW2 580 aa5□□□□□ -1.61
NCKAP1-204ENST00000477988 TMEM132CQ8N3T6 1108 aa5□□□□□ -1.61
NCKAP1-204ENST00000477988 SNX33Q8WV41 574 aa5□□□□□ -1.61
NCKAP1-204ENST00000477988 ZNF428Q96B54 188 aa5□□□□□ -1.61
NCKAP1-204ENST00000477988 PDLIM2Q96JY6 352 aa5□□□□□ -1.61
NCKAP1-204ENST00000477988 NEU1Q99519 415 aa5□□□□□ -1.61
NCKAP1-204ENST00000477988 TMEM74BQ9NUR3 256 aa5□□□□□ -1.61
NCKAP1-204ENST00000477988 FOXJ2Q9P0K8 574 aa5□□□□□ -1.61
NCKAP1-204ENST00000477988 H2AFY2Q9P0M6 372 aaPredicted RBP5□□□□□ -1.61
NCKAP1-204ENST00000477988 SLC17A6Q9P2U8 582 aa5□□□□□ -1.61
NCKAP1-204ENST00000477988 NOX1Q9Y5S8 564 aa5□□□□□ -1.61
NCKAP1-204ENST00000477988 GAS7O60861 476 aa4.99□□□□□ -1.61
NCKAP1-204ENST00000477988 F2P00734 622 aa4.99□□□□□ -1.61
NCKAP1-204ENST00000477988 MAPKAPK5Q8IW41 473 aa4.99□□□□□ -1.61
NCKAP1-204ENST00000477988 RNF169Q8NCN4 708 aa4.99□□□□□ -1.61
NCKAP1-204ENST00000477988 BOD1Q96IK1 185 aa4.99□□□□□ -1.61
NCKAP1-204ENST00000477988 MTFR1LQ9H019 292 aa4.99□□□□□ -1.61
NCKAP1-204ENST00000477988 LRIT1Q9P2V4 623 aa4.99□□□□□ -1.61
NCKAP1-204ENST00000477988 PRSS38A1L453 326 aa4.98□□□□□ -1.61
NCKAP1-204ENST00000477988 LRRC3CA6NJW4 275 aa4.98□□□□□ -1.61
NCKAP1-204ENST00000477988 PRAMEF4O60810 478 aa4.98□□□□□ -1.61
NCKAP1-204ENST00000477988 CRHR1P34998 444 aa4.98□□□□□ -1.61
NCKAP1-204ENST00000477988 RBM25P49756 843 aaKnown RBP4.98□□□□□ -1.61
NCKAP1-204ENST00000477988 FLT3LGP49771 235 aa4.98□□□□□ -1.61
NCKAP1-204ENST00000477988 CHN2P52757 468 aa4.98□□□□□ -1.61
NCKAP1-204ENST00000477988 PHC1P78364 1004 aa4.98□□□□□ -1.61
NCKAP1-204ENST00000477988 ATXN7L2Q5T6C5 722 aaPredicted RBP4.98□□□□□ -1.61
NCKAP1-204ENST00000477988 FAM43AQ8N2R8 423 aa4.98□□□□□ -1.61
NCKAP1-204ENST00000477988 LILRB2Q8N423 598 aa4.98□□□□□ -1.61
NCKAP1-204ENST00000477988 SH2D3CQ8N5H7 860 aa4.98□□□□□ -1.61
NCKAP1-204ENST00000477988 OR56A1Q8NGH5 318 aa4.98□□□□□ -1.61
NCKAP1-204ENST00000477988 MDM1Q8TC05 714 aa4.98□□□□□ -1.61
NCKAP1-204ENST00000477988 PAWRQ96IZ0 340 aaKnown RBP4.98□□□□□ -1.61
NCKAP1-204ENST00000477988 ALOXE3Q9BYJ1 711 aa4.98□□□□□ -1.61
NCKAP1-204ENST00000477988 KLHL11Q9NVR0 708 aa4.98□□□□□ -1.61
NCKAP1-204ENST00000477988 TBCCD1Q9NVR7 557 aa4.98□□□□□ -1.61
NCKAP1-204ENST00000477988 GPRC5DQ9NZD1 345 aa4.98□□□□□ -1.61
NCKAP1-204ENST00000477988 PRSS50Q9UI38 385 aa4.98□□□□□ -1.61
NCKAP1-204ENST00000477988 MGST3O14880 152 aa4.97□□□□□ -1.61
NCKAP1-204ENST00000477988 RFPL3O75679 317 aa4.97□□□□□ -1.61
NCKAP1-204ENST00000477988 ELANEP08246 267 aa4.97□□□□□ -1.61
NCKAP1-204ENST00000477988 SDSP20132 328 aa4.97□□□□□ -1.61
NCKAP1-204ENST00000477988 CLRN1P58418 232 aa4.97□□□□□ -1.61
NCKAP1-204ENST00000477988 MRPS35P82673 323 aaKnown RBP4.97□□□□□ -1.61
NCKAP1-204ENST00000477988 PPARAQ07869 468 aa4.97□□□□□ -1.61
NCKAP1-204ENST00000477988 B3GNTL1Q67FW5 361 aaPredicted RBP4.97□□□□□ -1.61
NCKAP1-204ENST00000477988 ZNF425Q6IV72 752 aa4.97□□□□□ -1.61
NCKAP1-204ENST00000477988 OR14C36Q8NHC7 312 aa4.97□□□□□ -1.61
NCKAP1-204ENST00000477988 CEP95Q96GE4 821 aa4.97□□□□□ -1.61
NCKAP1-204ENST00000477988 REXO4Q9GZR2 422 aaKnown RBP4.97□□□□□ -1.61
NCKAP1-204ENST00000477988 MAGEC2Q9UBF1 373 aaPredicted RBP4.97□□□□□ -1.61
NCKAP1-204ENST00000477988 EVLQ9UI08 416 aaPredicted RBP4.97□□□□□ -1.61
NCKAP1-204ENST00000477988 TMPRSS11EQ9UL52 423 aa4.97□□□□□ -1.61
NCKAP1-204ENST00000477988 TGM5O43548 720 aa4.96□□□□□ -1.62
NCKAP1-204ENST00000477988 TMEM127O75204 238 aa4.96□□□□□ -1.62
NCKAP1-204ENST00000477988 DSG1Q02413 1049 aa4.96□□□□□ -1.62
NCKAP1-204ENST00000477988 SRSF4Q08170 494 aaKnown RBP4.96□□□□□ -1.62
NCKAP1-204ENST00000477988 FAM47AQ5JRC9 791 aa4.96□□□□□ -1.62
NCKAP1-204ENST00000477988 KIAA1614Q5VZ46 1190 aa4.96□□□□□ -1.62
NCKAP1-204ENST00000477988 ABHD15Q6UXT9 468 aa4.96□□□□□ -1.62
NCKAP1-204ENST00000477988 SLC41A1Q8IVJ1 513 aa4.96□□□□□ -1.62
NCKAP1-204ENST00000477988 ZNF610Q8N9Z0 462 aa4.96□□□□□ -1.62
NCKAP1-204ENST00000477988 HEPHQ9BQS7 1158 aa4.96□□□□□ -1.62
NCKAP1-204ENST00000477988 KLK15Q9H2R5 256 aa4.96□□□□□ -1.62
NCKAP1-204ENST00000477988 GALNT9Q9HCQ5 603 aa4.96□□□□□ -1.62
NCKAP1-204ENST00000477988 CASS4Q9NQ75 786 aa4.96□□□□□ -1.62
NCKAP1-204ENST00000477988 ZNF70Q9UC06 446 aaPredicted RBP4.96□□□□□ -1.62
NCKAP1-204ENST00000477988 SNRPA1P09661 255 aaKnown RBP4.95□□□□□ -1.62
NCKAP1-204ENST00000477988 LSP1P33241 339 aa4.95□□□□□ -1.62
NCKAP1-204ENST00000477988 MFSD14BQ5SR56 506 aa4.95□□□□□ -1.62
NCKAP1-204ENST00000477988 PRAMEF14Q5SWL7 426 aa4.95□□□□□ -1.62
NCKAP1-204ENST00000477988 TSHZ3Q63HK5 1081 aa4.95□□□□□ -1.62
NCKAP1-204ENST00000477988 PTF1AQ7RTS3 328 aa4.95□□□□□ -1.62
NCKAP1-204ENST00000477988 LYSMD2Q8IV50 215 aa4.95□□□□□ -1.62
NCKAP1-204ENST00000477988 ACTRT2Q8TDY3 377 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms