RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 TNFSF9P41273 254 aa17.63■□□□□ 0.41
VHL-203ENST00000477538 GRM5P41594 1212 aa17.63■□□□□ 0.41
VHL-203ENST00000477538 NCAPHQ15003 741 aa17.63■□□□□ 0.41
VHL-203ENST00000477538 CRELD2Q6UXH1 353 aaPredicted RBP17.63■□□□□ 0.41
VHL-203ENST00000477538 RDH13Q8NBN7 331 aa17.63■□□□□ 0.41
VHL-203ENST00000477538 SMG8Q8ND04 991 aaKnown RBP17.63■□□□□ 0.41
VHL-203ENST00000477538 FBXL18Q96ME1 805 aa17.63■□□□□ 0.41
VHL-203ENST00000477538 MKNK1Q9BUB5 465 aa17.63■□□□□ 0.41
VHL-203ENST00000477538 CCDC94Q9BW85 323 aaPredicted RBP17.63■□□□□ 0.41
VHL-203ENST00000477538 APOL6Q9BWW8 343 aa17.63■□□□□ 0.41
VHL-203ENST00000477538 CPSF3Q9UKF6 684 aaKnown RBP17.63■□□□□ 0.41
VHL-203ENST00000477538 HES2Q9Y543 173 aa17.63■□□□□ 0.41
VHL-203ENST00000477538 ABHD14A-ACY1A0A1B0GW23 586 aa17.62■□□□□ 0.41
VHL-203ENST00000477538 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.62■□□□□ 0.41
VHL-203ENST00000477538 ZNF233A6NK53 670 aa17.62■□□□□ 0.41
VHL-203ENST00000477538 SLC16A3O15427 465 aaKnown RBP17.62■□□□□ 0.41
VHL-203ENST00000477538 EFCAB14O75071 495 aa17.62■□□□□ 0.41
VHL-203ENST00000477538 ZNF623O75123 536 aa17.62■□□□□ 0.41
VHL-203ENST00000477538 CAPN15O75808 1086 aa17.62■□□□□ 0.41
VHL-203ENST00000477538 AKAP3O75969 853 aa17.62■□□□□ 0.41
VHL-203ENST00000477538 CLTAP09496 248 aa17.62■□□□□ 0.41
VHL-203ENST00000477538 EPB41P11171 864 aaKnown RBP17.62■□□□□ 0.41
VHL-203ENST00000477538 PSMC2P35998 433 aaKnown RBP17.62■□□□□ 0.41
VHL-203ENST00000477538 RGS19P49795 217 aa17.62■□□□□ 0.41
VHL-203ENST00000477538 SNRNP35Q16560 246 aaKnown RBP17.62■□□□□ 0.41
VHL-203ENST00000477538 PSRC1Q6PGN9 363 aaPredicted RBP17.62■□□□□ 0.41
VHL-203ENST00000477538 C16orf59Q7L2K0 433 aa17.62■□□□□ 0.41
VHL-203ENST00000477538 FILIP1Q7Z7B0 1213 aa17.62■□□□□ 0.41
VHL-203ENST00000477538 MRPL10Q7Z7H8 261 aaKnown RBP17.62■□□□□ 0.41
VHL-203ENST00000477538 LUZP1Q86V48 1076 aa17.62■□□□□ 0.41
VHL-203ENST00000477538 GAS2L3Q86XJ1 694 aa17.62■□□□□ 0.41
VHL-203ENST00000477538 ECHDC2Q86YB7 292 aa17.62■□□□□ 0.41
VHL-203ENST00000477538 CBWD2Q8IUF1 395 aa17.62■□□□□ 0.41
VHL-203ENST00000477538 TMEM192Q8IY95 271 aa17.62■□□□□ 0.41
VHL-203ENST00000477538 FAM186BQ8IYM0 893 aa17.62■□□□□ 0.41
VHL-203ENST00000477538 HACE1Q8IYU2 909 aa17.62■□□□□ 0.41
VHL-203ENST00000477538 THAP9Q9H5L6 903 aa17.62■□□□□ 0.41
VHL-203ENST00000477538 SAMSN1Q9NSI8 373 aaKnown RBP17.62■□□□□ 0.41
VHL-203ENST00000477538 SNTG2Q9NY99 539 aa17.62■□□□□ 0.41
VHL-203ENST00000477538 KIAA1671Q9BY89 1806 aa17.62■□□□□ 0.41
VHL-203ENST00000477538 MAPK13O15264 365 aa17.61■□□□□ 0.41
VHL-203ENST00000477538 BAIAP3O94812 1187 aa17.61■□□□□ 0.41
VHL-203ENST00000477538 FGBP02675 491 aa17.61■□□□□ 0.41
VHL-203ENST00000477538 ADRB2P07550 413 aa17.61■□□□□ 0.41
VHL-203ENST00000477538 CXCL8P10145 99 aa17.61■□□□□ 0.41
VHL-203ENST00000477538 ITGA4P13612 1032 aa17.61■□□□□ 0.41
VHL-203ENST00000477538 ATF7P17544 494 aaPredicted RBP17.61■□□□□ 0.41
VHL-203ENST00000477538 EPHB4P54760 987 aa17.61■□□□□ 0.41
VHL-203ENST00000477538 CCDC40Q4G0X9 1142 aa17.61■□□□□ 0.41
VHL-203ENST00000477538 ZNF365Q70YC5 407 aa17.61■□□□□ 0.41
VHL-203ENST00000477538 ZNF598Q86UK7 904 aaKnown RBP17.61■□□□□ 0.41
VHL-203ENST00000477538 FAM114A1Q8IWE2 563 aa17.61■□□□□ 0.41
VHL-203ENST00000477538 BRSK2Q8IWQ3 736 aa17.61■□□□□ 0.41
VHL-203ENST00000477538 RNF169Q8NCN4 708 aa17.61■□□□□ 0.41
VHL-203ENST00000477538 RNF214Q8ND24 703 aa17.61■□□□□ 0.41
VHL-203ENST00000477538 PGBD4Q96DM1 585 aa17.61■□□□□ 0.41
VHL-203ENST00000477538 ACAP3Q96P50 834 aa17.61■□□□□ 0.41
VHL-203ENST00000477538 RPF1Q9H9Y2 349 aaKnown RBP17.61■□□□□ 0.41
VHL-203ENST00000477538 FANCLQ9NW38 375 aa17.61■□□□□ 0.41
VHL-203ENST00000477538 RBAKQ9NYW8 714 aaPredicted RBP17.61■□□□□ 0.41
VHL-203ENST00000477538 PARP2Q9UGN5 583 aa17.61■□□□□ 0.41
VHL-203ENST00000477538 NLRC5Q86WI3 1866 aa17.61■□□□□ 0.41
VHL-203ENST00000477538 GOLGA6L19H0YKK7 550 aa17.6■□□□□ 0.41
VHL-203ENST00000477538 RECQL4O94761 1208 aa17.6■□□□□ 0.41
VHL-203ENST00000477538 GNA14O95837 355 aa17.6■□□□□ 0.41
VHL-203ENST00000477538 AKAP5P24588 427 aa17.6■□□□□ 0.41
VHL-203ENST00000477538 YARSP54577 528 aaKnown RBP17.6■□□□□ 0.41
VHL-203ENST00000477538 FAM189BP81408 668 aa17.6■□□□□ 0.41
VHL-203ENST00000477538 CYP24A1Q07973 514 aa17.6■□□□□ 0.41
VHL-203ENST00000477538 ENOX2Q16206 610 aaKnown RBP17.6■□□□□ 0.41
VHL-203ENST00000477538 HSP90AA4PQ58FG1 418 aa17.6■□□□□ 0.41
VHL-203ENST00000477538 TMEM240Q5SV17 173 aa17.6■□□□□ 0.41
VHL-203ENST00000477538 CDKAL1Q5VV42 579 aa17.6■□□□□ 0.41
VHL-203ENST00000477538 OTOP2Q7RTS6 562 aa17.6■□□□□ 0.41
VHL-203ENST00000477538 IRF2BP1Q8IU81 584 aa17.6■□□□□ 0.41
VHL-203ENST00000477538 LPPQ93052 612 aa17.6■□□□□ 0.41
VHL-203ENST00000477538 CNOT6LQ96LI5 555 aaKnown RBP17.6■□□□□ 0.41
VHL-203ENST00000477538 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.6■□□□□ 0.41
VHL-203ENST00000477538 RNF39Q9H2S5 420 aa17.6■□□□□ 0.41
VHL-203ENST00000477538 ELAC1Q9H777 363 aaKnown RBP17.6■□□□□ 0.41
VHL-203ENST00000477538 TOPORSQ9NS56 1045 aaPredicted RBP17.6■□□□□ 0.41
VHL-203ENST00000477538 TMEM161AQ9NX61 479 aa17.6■□□□□ 0.41
VHL-203ENST00000477538 MAGEC2Q9UBF1 373 aaPredicted RBP17.6■□□□□ 0.41
VHL-203ENST00000477538 SCN1AP35498 2009 aa17.59■□□□□ 0.41
VHL-203ENST00000477538 MEIS3P2A8K0S8 358 aa17.59■□□□□ 0.41
VHL-203ENST00000477538 EOMESO95936 686 aa17.59■□□□□ 0.41
VHL-203ENST00000477538 KRT13P13646 458 aa17.59■□□□□ 0.41
VHL-203ENST00000477538 MAGEA10P43363 369 aaPredicted RBP17.59■□□□□ 0.41
VHL-203ENST00000477538 WDR5P61964 334 aaKnown RBP17.59■□□□□ 0.41
VHL-203ENST00000477538 TPM4P67936 248 aa17.59■□□□□ 0.41
VHL-203ENST00000477538 POU5F1Q01860 360 aaKnown RBP17.59■□□□□ 0.41
VHL-203ENST00000477538 SLC10A6Q3KNW5 377 aa17.59■□□□□ 0.41
VHL-203ENST00000477538 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.59■□□□□ 0.41
VHL-203ENST00000477538 INTS8Q75QN2 995 aaKnown RBP17.59■□□□□ 0.41
VHL-203ENST00000477538 FRMD5Q7Z6J6 570 aa17.59■□□□□ 0.41
VHL-203ENST00000477538 CREBRFQ8IUR6 639 aa17.59■□□□□ 0.41
VHL-203ENST00000477538 FAM212AQ96EL1 285 aa17.59■□□□□ 0.41
VHL-203ENST00000477538 MFSD14AQ96MC6 490 aa17.59■□□□□ 0.41
VHL-203ENST00000477538 RBSNQ9H1K0 784 aa17.59■□□□□ 0.41
VHL-203ENST00000477538 HSD3B7Q9H2F3 369 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms