RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 BTNL9Q6UXG8 535 aa5.72□□□□□ -1.49
UBR3-209ENST00000477461 RSAD2Q8WXG1 361 aa5.72□□□□□ -1.49
UBR3-209ENST00000477461 USP7Q93009 1102 aa5.72□□□□□ -1.49
UBR3-209ENST00000477461 GPRC5DQ9NZD1 345 aa5.72□□□□□ -1.49
UBR3-209ENST00000477461 DPP7Q9UHL4 492 aa5.72□□□□□ -1.49
UBR3-209ENST00000477461 TMA7Q9Y2S6 64 aaKnown RBP5.72□□□□□ -1.49
UBR3-209ENST00000477461 CHST2Q9Y4C5 530 aa5.72□□□□□ -1.49
UBR3-209ENST00000477461 USP15Q9Y4E8 981 aaPredicted RBP5.72□□□□□ -1.49
UBR3-209ENST00000477461 KIF21AQ7Z4S6 1674 aa5.72□□□□□ -1.49
UBR3-209ENST00000477461 CEP164Q9UPV0 1460 aa5.71□□□□□ -1.49
UBR3-209ENST00000477461 TMEM200CA6NKL6 621 aa5.71□□□□□ -1.5
UBR3-209ENST00000477461 NEMP1O14524 444 aa5.71□□□□□ -1.5
UBR3-209ENST00000477461 KIAA0355O15063 1070 aa5.71□□□□□ -1.5
UBR3-209ENST00000477461 PPFIA4O75335 1185 aa5.71□□□□□ -1.5
UBR3-209ENST00000477461 ZSCAN20P17040 1043 aaPredicted RBP5.71□□□□□ -1.5
UBR3-209ENST00000477461 PTPN7P35236 360 aa5.71□□□□□ -1.5
UBR3-209ENST00000477461 PLA2G5P39877 138 aa5.71□□□□□ -1.5
UBR3-209ENST00000477461 C19orf54Q5BKX5 351 aa5.71□□□□□ -1.5
UBR3-209ENST00000477461 PRAMEF14Q5SWL7 426 aa5.71□□□□□ -1.5
UBR3-209ENST00000477461 Q6YL49 198 aa5.71□□□□□ -1.5
UBR3-209ENST00000477461 KIAA0907Q7Z7F0 614 aaPredicted RBP5.71□□□□□ -1.5
UBR3-209ENST00000477461 CMIPQ8IY22 773 aa5.71□□□□□ -1.5
UBR3-209ENST00000477461 CPEB3Q8NE35 698 aaKnown RBP5.71□□□□□ -1.5
UBR3-209ENST00000477461 SUPT20HQ8NEM7 779 aa5.71□□□□□ -1.5
UBR3-209ENST00000477461 SLC35B2Q8TB61 432 aa5.71□□□□□ -1.5
UBR3-209ENST00000477461 TGFBRAP1Q8WUH2 860 aa5.71□□□□□ -1.5
UBR3-209ENST00000477461 CLCA2Q9UQC9 943 aa5.71□□□□□ -1.5
UBR3-209ENST00000477461 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.7□□□□□ -1.5
UBR3-209ENST00000477461 RBP3P10745 1247 aa5.7□□□□□ -1.5
UBR3-209ENST00000477461 USP14P54578 494 aa5.7□□□□□ -1.5
UBR3-209ENST00000477461 KRTAP1-1Q07627 177 aa5.7□□□□□ -1.5
UBR3-209ENST00000477461 STRN3Q13033 797 aa5.7□□□□□ -1.5
UBR3-209ENST00000477461 CLRN3Q8NCR9 226 aa5.7□□□□□ -1.5
UBR3-209ENST00000477461 CAVIN3Q969G5 261 aa5.7□□□□□ -1.5
UBR3-209ENST00000477461 WNT8AQ9H1J5 351 aa5.7□□□□□ -1.5
UBR3-209ENST00000477461 TOR3AQ9H497 397 aa5.7□□□□□ -1.5
UBR3-209ENST00000477461 ZAR1LA6NP61 321 aa5.69□□□□□ -1.5
UBR3-209ENST00000477461 B5MCH6 92 aa5.69□□□□□ -1.5
UBR3-209ENST00000477461 AKR1B10O60218 316 aa5.69□□□□□ -1.5
UBR3-209ENST00000477461 HSD3B2P26439 372 aa5.69□□□□□ -1.5
UBR3-209ENST00000477461 CHN2P52757 468 aa5.69□□□□□ -1.5
UBR3-209ENST00000477461 GUCY1B3Q02153 619 aa5.69□□□□□ -1.5
UBR3-209ENST00000477461 RESTQ13127 1097 aa5.69□□□□□ -1.5
UBR3-209ENST00000477461 TP53BP2Q13625 1128 aa5.69□□□□□ -1.5
UBR3-209ENST00000477461 BMT2Q1RMZ1 405 aa5.69□□□□□ -1.5
UBR3-209ENST00000477461 BEAN1Q3B7T3 259 aa5.69□□□□□ -1.5
UBR3-209ENST00000477461 SDE2Q6IQ49 451 aa5.69□□□□□ -1.5
UBR3-209ENST00000477461 DRICH1Q6PGQ1 229 aaPredicted RBP5.69□□□□□ -1.5
UBR3-209ENST00000477461 DDX46Q7L014 1031 aaKnown RBP5.69□□□□□ -1.5
UBR3-209ENST00000477461 ARHGEF19Q8IW93 802 aa5.69□□□□□ -1.5
UBR3-209ENST00000477461 STON2Q8WXE9 905 aa5.69□□□□□ -1.5
UBR3-209ENST00000477461 SYNPO2LQ9H987 977 aa5.69□□□□□ -1.5
UBR3-209ENST00000477461 RPTORQ8N122 1335 aa5.69□□□□□ -1.5
UBR3-209ENST00000477461 DRGXA6NNA5 263 aa5.68□□□□□ -1.5
UBR3-209ENST00000477461 WNT10BO00744 389 aa5.68□□□□□ -1.5
UBR3-209ENST00000477461 BPIP17213 487 aa5.68□□□□□ -1.5
UBR3-209ENST00000477461 DDX6P26196 483 aaKnown RBP eCLIP5.68□□□□□ -1.5
UBR3-209ENST00000477461 GYS2P54840 703 aa5.68□□□□□ -1.5
UBR3-209ENST00000477461 RAP2BP61225 183 aa5.68□□□□□ -1.5
UBR3-209ENST00000477461 FAM102AQ5T9C2 384 aaPredicted RBP5.68□□□□□ -1.5
UBR3-209ENST00000477461 METRNLQ641Q3 311 aa5.68□□□□□ -1.5
UBR3-209ENST00000477461 PDZD4Q76G19 769 aaPredicted RBP5.68□□□□□ -1.5
UBR3-209ENST00000477461 STRA8Q7Z7C7 330 aa5.68□□□□□ -1.5
UBR3-209ENST00000477461 PLXDC1Q8IUK5 500 aa5.68□□□□□ -1.5
UBR3-209ENST00000477461 RIN2Q8WYP3 895 aaPredicted RBP5.68□□□□□ -1.5
UBR3-209ENST00000477461 NEU1Q99519 415 aa5.68□□□□□ -1.5
UBR3-209ENST00000477461 EPN1Q9Y6I3 576 aaPredicted RBP5.68□□□□□ -1.5
UBR3-209ENST00000477461 ABCC8Q09428 1581 aa5.67□□□□□ -1.5
UBR3-209ENST00000477461 WRNQ14191 1432 aaPredicted RBP eCLIP5.67□□□□□ -1.5
UBR3-209ENST00000477461 MRC2Q9UBG0 1479 aa5.67□□□□□ -1.5
UBR3-209ENST00000477461 GAGE12BA1L429 117 aa5.67□□□□□ -1.5
UBR3-209ENST00000477461 GAGE12HA6NDE8 117 aa5.67□□□□□ -1.5
UBR3-209ENST00000477461 GOLGA8AA7E2F4 631 aa5.67□□□□□ -1.5
UBR3-209ENST00000477461 GASTP01350 101 aa5.67□□□□□ -1.5
UBR3-209ENST00000477461 MGAT1P26572 445 aa5.67□□□□□ -1.5
UBR3-209ENST00000477461 PTH2RP49190 550 aa5.67□□□□□ -1.5
UBR3-209ENST00000477461 MEF2AQ02078 507 aaPredicted RBP5.67□□□□□ -1.5
UBR3-209ENST00000477461 FSCN1Q16658 493 aaKnown RBP5.67□□□□□ -1.5
UBR3-209ENST00000477461 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.67□□□□□ -1.5
UBR3-209ENST00000477461 ATXN7L2Q5T6C5 722 aaPredicted RBP5.67□□□□□ -1.5
UBR3-209ENST00000477461 STRIP1Q5VSL9 837 aa5.67□□□□□ -1.5
UBR3-209ENST00000477461 TSHZ3Q63HK5 1081 aa5.67□□□□□ -1.5
UBR3-209ENST00000477461 ZFP28Q8NHY6 868 aa5.67□□□□□ -1.5
UBR3-209ENST00000477461 ZNF480Q8WV37 535 aa5.67□□□□□ -1.5
UBR3-209ENST00000477461 ADAM2Q99965 735 aa5.67□□□□□ -1.5
UBR3-209ENST00000477461 QRSL1Q9H0R6 528 aaKnown RBP5.67□□□□□ -1.5
UBR3-209ENST00000477461 TMX1Q9H3N1 280 aa5.67□□□□□ -1.5
UBR3-209ENST00000477461 IFT22Q9H7X7 185 aa5.67□□□□□ -1.5
UBR3-209ENST00000477461 RNF181Q9P0P0 153 aa5.67□□□□□ -1.5
UBR3-209ENST00000477461 PTGFRNQ9P2B2 879 aa5.67□□□□□ -1.5
UBR3-209ENST00000477461 DKK2Q9UBU2 259 aa5.67□□□□□ -1.5
UBR3-209ENST00000477461 MAPRE3Q9UPY8 281 aa5.67□□□□□ -1.5
UBR3-209ENST00000477461 COL11A2P13942 1736 aaPredicted RBP5.66□□□□□ -1.5
UBR3-209ENST00000477461 CXorf49A8MYA2 514 aaPredicted RBP5.66□□□□□ -1.5
UBR3-209ENST00000477461 DIRC3C9JPN6 131 aa5.66□□□□□ -1.5
UBR3-209ENST00000477461 SPDEFO95238 335 aa5.66□□□□□ -1.5
UBR3-209ENST00000477461 ENPP1P22413 925 aa5.66□□□□□ -1.5
UBR3-209ENST00000477461 BMPR1AP36894 532 aa5.66□□□□□ -1.5
UBR3-209ENST00000477461 CLK3P49761 638 aaKnown RBP5.66□□□□□ -1.5
UBR3-209ENST00000477461 SCAND1P57086 179 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms