RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 DUSP9Q99956 384 aaKnown RBP8.15□□□□□ -1.1
BRCA1-214ENST00000477152 CRISPLD1Q9H336 500 aa8.15□□□□□ -1.1
BRCA1-214ENST00000477152 DISC1Q9NRI5 854 aa8.15□□□□□ -1.1
BRCA1-214ENST00000477152 TYW1Q9NV66 732 aaKnown RBP8.15□□□□□ -1.1
BRCA1-214ENST00000477152 TMEM221A6NGB7 291 aa8.15□□□□□ -1.11
BRCA1-214ENST00000477152 LOC730098B7Z3J9 87 aa8.15□□□□□ -1.11
BRCA1-214ENST00000477152 M0R296 226 aa8.15□□□□□ -1.11
BRCA1-214ENST00000477152 CPLX1O14810 134 aa8.15□□□□□ -1.11
BRCA1-214ENST00000477152 LINC01565O15544 149 aa8.15□□□□□ -1.11
BRCA1-214ENST00000477152 EPB41L2O43491 1005 aaKnown RBP8.15□□□□□ -1.11
BRCA1-214ENST00000477152 ZXDAP98168 799 aa8.15□□□□□ -1.11
BRCA1-214ENST00000477152 ITIH3Q06033 890 aa8.15□□□□□ -1.11
BRCA1-214ENST00000477152 DLX2Q07687 328 aaPredicted RBP8.15□□□□□ -1.11
BRCA1-214ENST00000477152 SIGLEC14Q08ET2 396 aa8.15□□□□□ -1.11
BRCA1-214ENST00000477152 CBX2Q14781 532 aaPredicted RBP8.15□□□□□ -1.11
BRCA1-214ENST00000477152 LRCH2Q5VUJ6 765 aa8.15□□□□□ -1.11
BRCA1-214ENST00000477152 FAM228AQ86W67 206 aa8.15□□□□□ -1.11
BRCA1-214ENST00000477152 ALKBH8Q96BT7 664 aaKnown RBP8.15□□□□□ -1.11
BRCA1-214ENST00000477152 PGBD4Q96DM1 585 aa8.15□□□□□ -1.11
BRCA1-214ENST00000477152 TMEM169Q96HH4 297 aa8.15□□□□□ -1.11
BRCA1-214ENST00000477152 CCDC136Q96JN2 1154 aa8.15□□□□□ -1.11
BRCA1-214ENST00000477152 RIPOR3Q96MK2 946 aa8.15□□□□□ -1.11
BRCA1-214ENST00000477152 JAKMIP1Q96N16 626 aaKnown RBP8.15□□□□□ -1.11
BRCA1-214ENST00000477152 TCF25Q9BQ70 676 aa8.15□□□□□ -1.11
BRCA1-214ENST00000477152 TMEM63CQ9P1W3 806 aa8.15□□□□□ -1.11
BRCA1-214ENST00000477152 USP15Q9Y4E8 981 aaPredicted RBP8.15□□□□□ -1.11
BRCA1-214ENST00000477152 PPME1Q9Y570 386 aa8.15□□□□□ -1.11
BRCA1-214ENST00000477152 IGLV3-22A0A075B6J6 115 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 DCDC2BA2VCK2 349 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 DHX15O43143 795 aaKnown RBP8.14□□□□□ -1.11
BRCA1-214ENST00000477152 GPR32O75388 356 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 VTNP04004 478 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 CA8P35219 290 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 GTF2F1P35269 517 aaKnown RBP eCLIP8.14□□□□□ -1.114e-8■■■□□ 16.5
BRCA1-214ENST00000477152 TECP42680 631 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 MTHFRP42898 656 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 RAB27AP51159 221 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 SSRP1Q08945 709 aaKnown RBP8.14□□□□□ -1.11
BRCA1-214ENST00000477152 NCBP1Q09161 790 aaKnown RBP8.14□□□□□ -1.11
BRCA1-214ENST00000477152 CAMK1Q14012 370 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 FAM102BQ5T8I3 360 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 ANKRD54Q6NXT1 300 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 KCNT2Q6UVM3 1135 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 MIER3Q7Z3K6 550 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 ADGRD2Q7Z7M1 963 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 PPFIBP1Q86W92 1011 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 PGBD3Q8N328 593 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 BRF1Q92994 677 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 ZBTB10Q96DT7 871 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 RPGRIP1Q96KN7 1286 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 FBXL18Q96ME1 805 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 SLC26A6Q9BXS9 759 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 BRD7Q9NPI1 651 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 DZANK1Q9NVP4 752 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 CLEC1BQ9P126 229 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 GMPR2Q9P2T1 348 aaKnown RBP8.14□□□□□ -1.11
BRCA1-214ENST00000477152 PARP2Q9UGN5 583 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 DPP7Q9UHL4 492 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 BARX2Q9UMQ3 279 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-214ENST00000477152 SPTBN5Q9NRC6 3674 aaKnown RBP8.14□□□□□ -1.11
BRCA1-214ENST00000477152 NID2Q14112 1375 aa8.14□□□□□ -1.11
BRCA1-214ENST00000477152 A0A0U1RQF3 1178 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 EIF1AYO14602 144 aaKnown RBP8.13□□□□□ -1.11
BRCA1-214ENST00000477152 FSCN2O14926 492 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 MARCH6O60337 910 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 CDKL5O76039 1030 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 PCSK2P16519 638 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 IFNAR1P17181 557 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 DNAJB1P25685 340 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 CDC27P30260 824 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 MRE11P49959 708 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 NHLH1Q02575 133 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 APOBRQ0VD83 1088 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 SFSWAPQ12872 951 aaKnown RBP8.13□□□□□ -1.11
BRCA1-214ENST00000477152 HIF1AQ16665 826 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 XKR3Q5GH77 459 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 PLPP4Q5VZY2 271 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 HFE2Q6ZVN8 426 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 TRMT1LQ7Z2T5 733 aaKnown RBP8.13□□□□□ -1.11
BRCA1-214ENST00000477152 ZNF410Q86VK4 478 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 ECHDC2Q86YB7 292 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 UBALD2Q8IYN6 164 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 FBXL6Q8N531 539 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 RNF169Q8NCN4 708 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 URGCPQ8TCY9 931 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 TCEANC2Q96MN5 208 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 CWH43Q9H720 699 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 SSX2IPQ9Y2D8 614 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 GPC6Q9Y625 555 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-214ENST00000477152 PER2O15055 1255 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 MGEA5O60502 916 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 EIF5BO60841 1220 aaKnown RBP8.13□□□□□ -1.11
BRCA1-214ENST00000477152 DEXIO95424 95 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 SNRPBP14678 240 aaKnown RBP8.13□□□□□ -1.11
BRCA1-214ENST00000477152 DARSP14868 501 aaKnown RBP8.13□□□□□ -1.11
BRCA1-214ENST00000477152 RPS6KB1P23443 525 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 HSPA4P34932 840 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 GPC3P51654 580 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 CLCN3P51790 818 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 POLGP54098 1239 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms