RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 POLR2FP61218 127 aaKnown RBP31.29■■■□□ 2.6
VEGFA-211ENST00000476772 SNX17Q15036 470 aa31.29■■■□□ 2.6
VEGFA-211ENST00000476772 SLC9C1Q4G0N8 1177 aa31.29■■■□□ 2.6
VEGFA-211ENST00000476772 KLHDC7AQ5VTJ3 777 aa31.29■■■□□ 2.6
VEGFA-211ENST00000476772 TRIM65Q6PJ69 517 aa31.29■■■□□ 2.6
VEGFA-211ENST00000476772 CATSPER4Q7RTX7 472 aa31.29■■■□□ 2.6
VEGFA-211ENST00000476772 CACNA2D4Q7Z3S7 1137 aa31.29■■■□□ 2.6
VEGFA-211ENST00000476772 BRSK2Q8IWQ3 736 aa31.29■■■□□ 2.6
VEGFA-211ENST00000476772 THNSL1Q8IYQ7 743 aa31.29■■■□□ 2.6
VEGFA-211ENST00000476772 CEP120Q8N960 986 aa31.29■■■□□ 2.6
VEGFA-211ENST00000476772 KIAA1524Q8TCG1 905 aa31.29■■■□□ 2.6
VEGFA-211ENST00000476772 BAP1Q92560 729 aa31.29■■■□□ 2.6
VEGFA-211ENST00000476772 GLT1D1Q96MS3 346 aa31.29■■■□□ 2.6
VEGFA-211ENST00000476772 FNBP1Q96RU3 617 aa31.29■■■□□ 2.6
VEGFA-211ENST00000476772 NLRC4Q9NPP4 1024 aa31.29■■■□□ 2.6
VEGFA-211ENST00000476772 CPSF3Q9UKF6 684 aaKnown RBP31.29■■■□□ 2.6
VEGFA-211ENST00000476772 MYCP01106 439 aaPredicted RBP31.29■■■□□ 2.6
VEGFA-211ENST00000476772 FECHP22830 423 aa31.29■■■□□ 2.6
VEGFA-211ENST00000476772 CRYBB1P53674 252 aaPredicted RBP31.29■■■□□ 2.6
VEGFA-211ENST00000476772 ZNF710Q8N1W2 664 aa31.29■■■□□ 2.6
VEGFA-211ENST00000476772 ARRDC4Q8NCT1 418 aa31.29■■■□□ 2.6
VEGFA-211ENST00000476772 INTS2Q9H0H0 1204 aaKnown RBP31.29■■■□□ 2.6
VEGFA-211ENST00000476772 TMEM8AQ9HCN3 771 aa31.29■■■□□ 2.6
VEGFA-211ENST00000476772 PMM2O15305 246 aa31.28■■■□□ 2.6
VEGFA-211ENST00000476772 MCF2P10911 925 aa31.28■■■□□ 2.6
VEGFA-211ENST00000476772 GTF2H1P32780 548 aa31.28■■■□□ 2.6
VEGFA-211ENST00000476772 CLDN10P78369 228 aa31.28■■■□□ 2.6
VEGFA-211ENST00000476772 MRPS6P82932 125 aaKnown RBP31.28■■■□□ 2.6
VEGFA-211ENST00000476772 MTFR1Q15390 333 aa31.28■■■□□ 2.6
VEGFA-211ENST00000476772 PTGISQ16647 500 aa31.28■■■□□ 2.6
VEGFA-211ENST00000476772 EPC2Q52LR7 807 aa31.28■■■□□ 2.6
VEGFA-211ENST00000476772 A0A1B0GUA9 196 aa31.27■■■□□ 2.6
VEGFA-211ENST00000476772 CETN1Q12798 172 aa31.27■■■□□ 2.6
VEGFA-211ENST00000476772 LMBRD2Q68DH5 695 aaPredicted RBP31.27■■■□□ 2.6
VEGFA-211ENST00000476772 KRT39Q6A163 491 aa31.27■■■□□ 2.6
VEGFA-211ENST00000476772 C17orf53Q8N3J3 647 aaPredicted RBP31.27■■■□□ 2.6
VEGFA-211ENST00000476772 LMO3Q8TAP4 145 aa31.27■■■□□ 2.6
VEGFA-211ENST00000476772 FAM84AQ96KN4 292 aa31.27■■■□□ 2.6
VEGFA-211ENST00000476772 NAA15Q9BXJ9 866 aaKnown RBP31.27■■■□□ 2.6
VEGFA-211ENST00000476772 CELF4Q9BZC1 486 aaKnown RBP31.27■■■□□ 2.6
VEGFA-211ENST00000476772 A0A1W2PQ45 241 aaPredicted RBP31.26■■■□□ 2.6
VEGFA-211ENST00000476772 A0A1W2PQY0 241 aa31.26■■■□□ 2.6
VEGFA-211ENST00000476772 UCHL3P15374 230 aa31.26■■■□□ 2.6
VEGFA-211ENST00000476772 OSTNP61366 133 aa31.26■■■□□ 2.6
VEGFA-211ENST00000476772 PCBP1Q15365 356 aaKnown RBP eCLIP31.26■■■□□ 2.66e-7■■□□□ 12.7
VEGFA-211ENST00000476772 PDXDC1Q6P996 788 aa31.26■■■□□ 2.6
VEGFA-211ENST00000476772 RRAGAQ7L523 313 aa31.26■■■□□ 2.6
VEGFA-211ENST00000476772 RSPH3Q86UC2 560 aa31.26■■■□□ 2.6
VEGFA-211ENST00000476772 EHBP1Q8NDI1 1231 aa31.26■■■□□ 2.6
VEGFA-211ENST00000476772 ZNF516Q92618 1163 aa31.26■■■□□ 2.6
VEGFA-211ENST00000476772 PAK6Q9NQU5 681 aaPredicted RBP31.26■■■□□ 2.6
VEGFA-211ENST00000476772 FHOD1Q9Y613 1164 aa31.26■■■□□ 2.6
VEGFA-211ENST00000476772 PTPRJQ12913 1337 aa31.26■■■□□ 2.6
VEGFA-211ENST00000476772 LRRC53A6NM62 1247 aa31.25■■■□□ 2.59
VEGFA-211ENST00000476772 ARHGAP6O43182 974 aa31.25■■■□□ 2.59
VEGFA-211ENST00000476772 TNNI1P19237 187 aa31.25■■■□□ 2.59
VEGFA-211ENST00000476772 HOXA11P31270 313 aaPredicted RBP31.25■■■□□ 2.59
VEGFA-211ENST00000476772 PTPN11Q06124 597 aaPredicted RBP31.25■■■□□ 2.59
VEGFA-211ENST00000476772 TSR1Q2NL82 804 aaKnown RBP31.25■■■□□ 2.59
VEGFA-211ENST00000476772 SV2AQ7L0J3 742 aa31.25■■■□□ 2.59
VEGFA-211ENST00000476772 CGRRF1Q99675 332 aa31.25■■■□□ 2.59
VEGFA-211ENST00000476772 TRPV2Q9Y5S1 764 aa31.25■■■□□ 2.59
VEGFA-211ENST00000476772 CDY2AQ9Y6F7 541 aa31.25■■■□□ 2.59
VEGFA-211ENST00000476772 M0QZ92 97 aa31.25■■■□□ 2.59
VEGFA-211ENST00000476772 WDR59Q6PJI9 974 aa31.25■■■□□ 2.59
VEGFA-211ENST00000476772 TMEM192Q8IY95 271 aa31.25■■■□□ 2.59
VEGFA-211ENST00000476772 CEP350Q5VT06 3117 aa31.24■■■□□ 2.59
VEGFA-211ENST00000476772 SOWAHDA6NJG2 315 aa31.24■■■□□ 2.59
VEGFA-211ENST00000476772 KBTBD13C9JR72 458 aa31.24■■■□□ 2.59
VEGFA-211ENST00000476772 RBAK-RBAKDNI3L0D1 243 aa31.24■■■□□ 2.59
VEGFA-211ENST00000476772 LRRN2O75325 713 aa31.24■■■□□ 2.59
VEGFA-211ENST00000476772 NCBP1Q09161 790 aaKnown RBP31.24■■■□□ 2.59
VEGFA-211ENST00000476772 ENOX2Q16206 610 aaKnown RBP31.24■■■□□ 2.59
VEGFA-211ENST00000476772 E4F1Q66K89 784 aaPredicted RBP31.24■■■□□ 2.59
VEGFA-211ENST00000476772 GJB7Q6PEY0 223 aa31.24■■■□□ 2.59
VEGFA-211ENST00000476772 RPAINQ86UA6 219 aa31.24■■■□□ 2.59
VEGFA-211ENST00000476772 ADPGKQ9BRR6 497 aa31.24■■■□□ 2.59
VEGFA-211ENST00000476772 TRMT13Q9NUP7 481 aaKnown RBP31.24■■■□□ 2.59
VEGFA-211ENST00000476772 AJAP1Q9UKB5 411 aaPredicted RBP31.24■■■□□ 2.59
VEGFA-211ENST00000476772 PHF24Q9UPV7 400 aa31.24■■■□□ 2.59
VEGFA-211ENST00000476772 BRCA2P51587 3418 aa31.23■■■□□ 2.59
VEGFA-211ENST00000476772 CTSHP09668 335 aa31.23■■■□□ 2.59
VEGFA-211ENST00000476772 MEA1Q16626 185 aa31.23■■■□□ 2.59
VEGFA-211ENST00000476772 C15orf39Q6ZRI6 1047 aa31.23■■■□□ 2.59
VEGFA-211ENST00000476772 FAM212AQ96EL1 285 aa31.23■■■□□ 2.59
VEGFA-211ENST00000476772 DEFB118Q96PH6 123 aa31.23■■■□□ 2.59
VEGFA-211ENST00000476772 STARD7Q9NQZ5 370 aa31.23■■■□□ 2.59
VEGFA-211ENST00000476772 FBXL5Q9UKA1 691 aa31.23■■■□□ 2.59
VEGFA-211ENST00000476772 COQ4Q9Y3A0 265 aa31.23■■■□□ 2.59
VEGFA-211ENST00000476772 STAG3L1P0CL83 205 aa31.22■■■□□ 2.59
VEGFA-211ENST00000476772 CCL5P13501 91 aa31.22■■■□□ 2.59
VEGFA-211ENST00000476772 IQCEQ6IPM2 695 aa31.22■■■□□ 2.59
VEGFA-211ENST00000476772 CYP26C1Q6V0L0 522 aa31.22■■■□□ 2.59
VEGFA-211ENST00000476772 TAS1R2Q8TE23 839 aa31.22■■■□□ 2.59
VEGFA-211ENST00000476772 SEMA4DQ92854 862 aa31.22■■■□□ 2.59
VEGFA-211ENST00000476772 CHP1Q99653 195 aa31.22■■■□□ 2.59
VEGFA-211ENST00000476772 ZNHIT6Q9NWK9 470 aaKnown RBP31.22■■■□□ 2.59
VEGFA-211ENST00000476772 PLAGL2Q9UPG8 496 aa31.22■■■□□ 2.59
VEGFA-211ENST00000476772 ANK1P16157 1881 aa31.22■■■□□ 2.59
VEGFA-211ENST00000476772 RPLP2P05387 115 aaKnown RBP31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms