RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 PALD1Q9ULE6 856 aa4.42□□□□□ -1.7
CD55-208ENST00000476590 ZMYND8Q9ULU4 1186 aaPredicted RBP4.42□□□□□ -1.7
CD55-208ENST00000476590 NOB1Q9ULX3 412 aaKnown RBP4.42□□□□□ -1.7
CD55-208ENST00000476590 FAF1Q9UNN5 650 aaPredicted RBP4.42□□□□□ -1.7
CD55-208ENST00000476590 STK38LQ9Y2H1 464 aa4.42□□□□□ -1.7
CD55-208ENST00000476590 PCDHB6Q9Y5E3 794 aa4.42□□□□□ -1.7
CD55-208ENST00000476590 PCDHB4Q9Y5E5 795 aa4.42□□□□□ -1.7
CD55-208ENST00000476590 ADGRG1Q9Y653 693 aa4.42□□□□□ -1.7
CD55-208ENST00000476590 ABCC12Q96J65 1359 aa4.42□□□□□ -1.7
CD55-208ENST00000476590 MYH13Q9UKX3 1938 aa4.42□□□□□ -1.7
CD55-208ENST00000476590 ABCC3O15438 1527 aa4.42□□□□□ -1.7
CD55-208ENST00000476590 MACROD2A1Z1Q3 448 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 F8W031 263 aaPredicted RBP4.41□□□□□ -1.7
CD55-208ENST00000476590 FOXN3O00409 490 aaPredicted RBP4.41□□□□□ -1.7
CD55-208ENST00000476590 PFDN6O15212 129 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 PEX11AO75192 247 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 GUCY1B2O75343 617 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 SERPINC1P01008 464 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 FYNP06241 537 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 LYNP07948 512 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 PCNAP12004 261 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 COL8A1P27658 744 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 CTHP32929 405 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 SOX11P35716 441 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 PRCPP42785 496 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 CBX5P45973 191 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 EIF2B2P49770 351 aaKnown RBP4.41□□□□□ -1.7
CD55-208ENST00000476590 NEK3P51956 506 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 PFKPQ01813 784 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 EXOSC9Q06265 439 aaKnown RBP4.41□□□□□ -1.7
CD55-208ENST00000476590 CETN1Q12798 172 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 NCOA4Q13772 614 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 NFE2L1Q14494 772 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 PLS1Q14651 629 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 TUSC1Q2TAM9 212 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 ANO4Q32M45 955 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 SPATA1Q5VX52 437 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 SPOPLQ6IQ16 392 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 DSTYKQ6XUX3 929 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 ANO5Q75V66 913 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 ITIH5Q86UX2 942 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 ZC3H18Q86VM9 953 aaKnown RBP4.41□□□□□ -1.7
CD55-208ENST00000476590 ZNF654Q8IZM8 581 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 SLC38A6Q8IZM9 456 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 IQCKQ8N0W5 287 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 RIBC1Q8N443 379 aaPredicted RBP4.41□□□□□ -1.7
CD55-208ENST00000476590 MREGQ8N565 214 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 TC2NQ8N9U0 490 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 USP38Q8NB14 1042 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 C1orf216Q8TAB5 229 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 HCAR2Q8TDS4 363 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 PIGOQ8TEQ8 1089 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 JPH3Q8WXH2 748 aaPredicted RBP4.41□□□□□ -1.7
CD55-208ENST00000476590 HERVK_113Q902F9 699 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 RAPGEF5Q92565 580 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 EME1Q96AY2 570 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 HSPBAP1Q96EW2 488 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 CHMP6Q96FZ7 201 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 CFAP36Q96G28 342 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 TMEM87BQ96K49 555 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 FAM20AQ96MK3 541 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 DEPDC7Q96QD5 511 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 XPO6Q96QU8 1125 aaKnown RBP4.41□□□□□ -1.7
CD55-208ENST00000476590 FERD3LQ96RJ6 166 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 CTRCQ99895 268 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 ESYT1Q9BSJ8 1104 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 TRPV6Q9H1D0 765 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 SH2B1Q9NRF2 756 aaPredicted RBP4.41□□□□□ -1.7
CD55-208ENST00000476590 FAM114A2Q9NRY5 505 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 ARMC1Q9NVT9 282 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 C9orf78Q9NZ63 289 aaPredicted RBP4.41□□□□□ -1.7
CD55-208ENST00000476590 ZIM2Q9NZV7 527 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 GMIPQ9P107 970 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 MTRF1LQ9UGC7 380 aaKnown RBP4.41□□□□□ -1.7
CD55-208ENST00000476590 KLHL3Q9UH77 587 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 STX8Q9UNK0 236 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 RPL26L1Q9UNX3 145 aaKnown RBP4.41□□□□□ -1.7
CD55-208ENST00000476590 RABGAP1Q9Y3P9 1069 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 CEP170Q5SW79 1584 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 SMARCA4P51532 1647 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 SUPT6HQ7KZ85 1726 aaKnown RBP4.41□□□□□ -1.7
CD55-208ENST00000476590 ADCY9O60503 1353 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 FUOMA2VDF0 154 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 A6NCN8 305 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 ZNF233A6NK53 670 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 SIGLEC16A6NMB1 481 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 GOLGA8JA6NMD2 632 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 GOLGA8BA8MQT2 603 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 CENPBD1B2RD01 187 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 PLSCR1O15162 318 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 ZW10O43264 779 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 CCNT1O60563 726 aaKnown RBP4.41□□□□□ -1.7
CD55-208ENST00000476590 ZC3H11AO75152 810 aaKnown RBP eCLIP4.41□□□□□ -1.72e-16■□□□□ 9.5
CD55-208ENST00000476590 KRT75O95678 551 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 OLFM2O95897 454 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 CHEK2O96017 543 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 KRT6AP02538 564 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 KRT6BP04259 564 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 PSMA3P25788 255 aa4.41□□□□□ -1.7
CD55-208ENST00000476590 EVI2BP34910 448 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms