RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 SPIRE2Q8WWL2 714 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 NSL1Q96IY1 281 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 LRRC27Q9C0I9 530 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 OSGEPQ9NPF4 335 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 AAASQ9NRG9 546 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 WHRNQ9P202 907 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 NAALADL1Q9UQQ1 740 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 TROVE2P10155 538 aaKnown RBP eCLIP14.73□□□□□ -0.05
HDAC1-206ENST00000476391 ALOX15P16050 662 aaPredicted RBP14.73□□□□□ -0.05
HDAC1-206ENST00000476391 GRIA2P42262 883 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 GSTM4Q03013 218 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 NR1H3Q13133 447 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 INF2Q27J81 1249 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 FYB2Q5VWT5 728 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 DAGLBQ8NCG7 672 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 TTLL11Q8NHH1 800 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 GAB3Q8WWW8 586 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 NDE1Q9NXR1 346 aa14.73□□□□□ -0.05
HDAC1-206ENST00000476391 DUOX1Q9NRD9 1551 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 FOXO6A8MYZ6 492 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 MIF4GDA9UHW6 222 aaKnown RBP14.72□□□□□ -0.05
HDAC1-206ENST00000476391 PRPF4O43172 522 aaKnown RBP eCLIP14.72□□□□□ -0.05
HDAC1-206ENST00000476391 HAUS5O94927 633 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 GAS8O95995 478 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 PCP11498 1178 aaKnown RBP14.72□□□□□ -0.05
HDAC1-206ENST00000476391 VEGFAP15692 232 aaPredicted RBP14.72□□□□□ -0.05
HDAC1-206ENST00000476391 PHKA1P46020 1223 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 AP2B1P63010 937 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 MED21Q13503 144 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 DPY19L2P1Q6NXN4 242 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 RINLQ6ZS11 566 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 RASGRP4Q8TDF6 673 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 DENND1AQ8TEH3 1009 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 LARP4BQ92615 738 aaKnown RBP14.72□□□□□ -0.05
HDAC1-206ENST00000476391 SIKE1Q9BRV8 207 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 BLOC1S4Q9NUP1 217 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 PCDHA6Q9UN73 950 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 PCDHA8Q9Y5H6 950 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 A0A1W2PRG0 241 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 RASA4BC9J798 803 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 RASA4O43374 803 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 AP1G1O43747 822 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 CSF1RP07333 972 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 HARSP12081 509 aaKnown RBP14.72□□□□□ -0.05
HDAC1-206ENST00000476391 GTF2H1P32780 548 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 HOXD12P35452 270 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 KCNH2Q12809 1159 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 SH3D19Q5HYK7 790 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 SLC15A3Q8IY34 581 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 SNRNP27Q8WVK2 155 aaKnown RBP14.72□□□□□ -0.05
HDAC1-206ENST00000476391 ALG3Q92685 438 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 DNAJC1Q96KC8 554 aaKnown RBP14.72□□□□□ -0.05
HDAC1-206ENST00000476391 CCDC77Q9BR77 488 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 PLA2G12BQ9BX93 195 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 FAIMQ9NVQ4 179 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 EURLQ9NYK6 297 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 PLCH1Q4KWH8 1693 aa14.72□□□□□ -0.05
HDAC1-206ENST00000476391 TNRQ92752 1358 aa14.71□□□□□ -0.05
HDAC1-206ENST00000476391 NPHP3-ACAD11A0A0J9YXS1 232 aa14.71□□□□□ -0.05
HDAC1-206ENST00000476391 TRIM43BA6NCK2 446 aa14.71□□□□□ -0.05
HDAC1-206ENST00000476391 TMEM247A6NEH6 219 aa14.71□□□□□ -0.05
HDAC1-206ENST00000476391 ANKRD63C9JTQ0 380 aa14.71□□□□□ -0.05
HDAC1-206ENST00000476391 MAGEC1O60732 1142 aa14.71□□□□□ -0.05
HDAC1-206ENST00000476391 COILP38432 576 aaPredicted RBP14.71□□□□□ -0.05
HDAC1-206ENST00000476391 RPL26P61254 145 aaKnown RBP14.71□□□□□ -0.05
HDAC1-206ENST00000476391 ASPHQ12797 758 aa14.71□□□□□ -0.05
HDAC1-206ENST00000476391 RHBDF2Q6PJF5 856 aa14.71□□□□□ -0.05
HDAC1-206ENST00000476391 DYMQ7RTS9 669 aa14.71□□□□□ -0.05
HDAC1-206ENST00000476391 CCDC105Q8IYK2 499 aa14.71□□□□□ -0.05
HDAC1-206ENST00000476391 ZBED8Q8IZ13 594 aa14.71□□□□□ -0.05
HDAC1-206ENST00000476391 FNDC8Q8TC99 324 aa14.71□□□□□ -0.05
HDAC1-206ENST00000476391 U2AF1L4Q8WU68 220 aaKnown RBP14.71□□□□□ -0.05
HDAC1-206ENST00000476391 SPOCK2Q92563 424 aa14.71□□□□□ -0.05
HDAC1-206ENST00000476391 FAM81BQ96LP2 452 aa14.71□□□□□ -0.05
HDAC1-206ENST00000476391 INIPQ9NRY2 104 aa14.71□□□□□ -0.05
HDAC1-206ENST00000476391 STK24Q9Y6E0 443 aa14.71□□□□□ -0.05
HDAC1-206ENST00000476391 MINDY4BA8MYZ0 360 aa14.71□□□□□ -0.06
HDAC1-206ENST00000476391 VILLO15195 856 aa14.71□□□□□ -0.06
HDAC1-206ENST00000476391 FUT4P22083 530 aa14.71□□□□□ -0.06
HDAC1-206ENST00000476391 ACADVLP49748 655 aa14.71□□□□□ -0.06
HDAC1-206ENST00000476391 STAT4Q14765 748 aa14.71□□□□□ -0.06
HDAC1-206ENST00000476391 TMEM266Q2M3C6 531 aa14.71□□□□□ -0.06
HDAC1-206ENST00000476391 HSP90AA5PQ58FG0 334 aa14.71□□□□□ -0.06
HDAC1-206ENST00000476391 TMEM63BQ5T3F8 832 aa14.71□□□□□ -0.06
HDAC1-206ENST00000476391 C1orf228Q6PIY5 440 aa14.71□□□□□ -0.06
HDAC1-206ENST00000476391 LDHAL6AQ6ZMR3 332 aa14.71□□□□□ -0.06
HDAC1-206ENST00000476391 CCDC65Q8IXS2 484 aa14.71□□□□□ -0.06
HDAC1-206ENST00000476391 NUP93Q8N1F7 819 aa14.71□□□□□ -0.06
HDAC1-206ENST00000476391 UBL4BQ8N7F7 174 aa14.71□□□□□ -0.06
HDAC1-206ENST00000476391 VGLL2Q8N8G2 317 aa14.71□□□□□ -0.06
HDAC1-206ENST00000476391 SPATA5Q8NB90 893 aa14.71□□□□□ -0.06
HDAC1-206ENST00000476391 ABHD8Q96I13 439 aa14.71□□□□□ -0.06
HDAC1-206ENST00000476391 ARL8BQ9NVJ2 186 aa14.71□□□□□ -0.06
HDAC1-206ENST00000476391 TAS2R1Q9NYW7 299 aa14.71□□□□□ -0.06
HDAC1-206ENST00000476391 TBK1Q9UHD2 729 aa14.71□□□□□ -0.06
HDAC1-206ENST00000476391 SSX2IPQ9Y2D8 614 aa14.71□□□□□ -0.06
HDAC1-206ENST00000476391 ANKRD36CQ5JPF3 1778 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 PCDH11YQ9BZA8 1340 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 NDC80O14777 642 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 PLSCR1O15162 318 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms