RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 EFNA5P52803 228 aa17.83■□□□□ 0.44
COL1A1-205ENST00000476387 DMP1Q13316 513 aaPredicted RBP17.83■□□□□ 0.44
COL1A1-205ENST00000476387 PRPF4BQ13523 1007 aaKnown RBP17.83■□□□□ 0.44
COL1A1-205ENST00000476387 TMEM119Q4V9L6 283 aa17.83■□□□□ 0.44
COL1A1-205ENST00000476387 RINT1Q6NUQ1 792 aa17.83■□□□□ 0.44
COL1A1-205ENST00000476387 C12orf76Q8N812 135 aaPredicted RBP17.83■□□□□ 0.44
COL1A1-205ENST00000476387 GSTCDQ8NEC7 633 aa17.83■□□□□ 0.44
COL1A1-205ENST00000476387 PBXIP1Q96AQ6 731 aa17.83■□□□□ 0.44
COL1A1-205ENST00000476387 RPS6KC1Q96S38 1066 aa17.83■□□□□ 0.44
COL1A1-205ENST00000476387 RUSC1Q9BVN2 902 aa17.83■□□□□ 0.44
COL1A1-205ENST00000476387 COLEC11Q9BWP8 271 aa17.83■□□□□ 0.44
COL1A1-205ENST00000476387 POLD4Q9HCU8 107 aa17.83■□□□□ 0.44
COL1A1-205ENST00000476387 USTQ9Y2C2 406 aa17.83■□□□□ 0.44
COL1A1-205ENST00000476387 CLIC4Q9Y696 253 aa17.83■□□□□ 0.44
COL1A1-205ENST00000476387 ADH1AP07327 375 aa17.82■□□□□ 0.44
COL1A1-205ENST00000476387 SP100P23497 879 aaPredicted RBP17.82■□□□□ 0.44
COL1A1-205ENST00000476387 AKAP5P24588 427 aa17.82■□□□□ 0.44
COL1A1-205ENST00000476387 GLUD2P49448 558 aa17.82■□□□□ 0.44
COL1A1-205ENST00000476387 GRIK3Q13003 919 aa17.82■□□□□ 0.44
COL1A1-205ENST00000476387 FAM173BQ6P4H8 233 aa17.82■□□□□ 0.44
COL1A1-205ENST00000476387 ZBTB33Q86T24 672 aa17.82■□□□□ 0.44
COL1A1-205ENST00000476387 CDR2LQ86X02 465 aaPredicted RBP17.82■□□□□ 0.44
COL1A1-205ENST00000476387 GPR65Q8IYL9 337 aa17.82■□□□□ 0.44
COL1A1-205ENST00000476387 ZDHHC14Q8IZN3 488 aa17.82■□□□□ 0.44
COL1A1-205ENST00000476387 ASIC4Q96FT7 647 aa17.82■□□□□ 0.44
COL1A1-205ENST00000476387 ADPGKQ9BRR6 497 aa17.82■□□□□ 0.44
COL1A1-205ENST00000476387 KIFC3Q9BVG8 833 aa17.82■□□□□ 0.44
COL1A1-205ENST00000476387 CCDC113Q9H0I3 377 aa17.82■□□□□ 0.44
COL1A1-205ENST00000476387 PHLPP2Q6ZVD8 1323 aa17.81■□□□□ 0.44
COL1A1-205ENST00000476387 C2CD4DB7Z1M9 353 aa17.81■□□□□ 0.44
COL1A1-205ENST00000476387 ACKR2O00590 384 aa17.81■□□□□ 0.44
COL1A1-205ENST00000476387 C1RP00736 705 aa17.81■□□□□ 0.44
COL1A1-205ENST00000476387 WEE2P0C1S8 567 aa17.81■□□□□ 0.44
COL1A1-205ENST00000476387 PLA2G4BP0C869 781 aa17.81■□□□□ 0.44
COL1A1-205ENST00000476387 GUCY2CP25092 1073 aa17.81■□□□□ 0.44
COL1A1-205ENST00000476387 PEX3P56589 373 aa17.81■□□□□ 0.44
COL1A1-205ENST00000476387 DSG1Q02413 1049 aa17.81■□□□□ 0.44
COL1A1-205ENST00000476387 CEBPZQ03701 1054 aaKnown RBP17.81■□□□□ 0.44
COL1A1-205ENST00000476387 KIAA0319Q5VV43 1072 aa17.81■□□□□ 0.44
COL1A1-205ENST00000476387 ELMSAN1Q6PJG2 1045 aa17.81■□□□□ 0.44
COL1A1-205ENST00000476387 C15orf39Q6ZRI6 1047 aa17.81■□□□□ 0.44
COL1A1-205ENST00000476387 C1orf186Q6ZWK4 172 aa17.81■□□□□ 0.44
COL1A1-205ENST00000476387 GPR149Q86SP6 731 aa17.81■□□□□ 0.44
COL1A1-205ENST00000476387 UBALD2Q8IYN6 164 aa17.81■□□□□ 0.44
COL1A1-205ENST00000476387 PLCD3Q8N3E9 789 aa17.81■□□□□ 0.44
COL1A1-205ENST00000476387 SYT2Q8N9I0 419 aaPredicted RBP17.81■□□□□ 0.44
COL1A1-205ENST00000476387 TDRD5Q8NAT2 981 aaKnown RBP17.81■□□□□ 0.44
COL1A1-205ENST00000476387 CMASQ8NFW8 434 aaPredicted RBP17.81■□□□□ 0.44
COL1A1-205ENST00000476387 C17orf75Q9HAS0 396 aa17.81■□□□□ 0.44
COL1A1-205ENST00000476387 RXFP1Q9HBX9 757 aa17.81■□□□□ 0.44
COL1A1-205ENST00000476387 KCND2Q9NZV8 630 aa17.81■□□□□ 0.44
COL1A1-205ENST00000476387 PARP2Q9UGN5 583 aa17.81■□□□□ 0.44
COL1A1-205ENST00000476387 DPP7Q9UHL4 492 aa17.81■□□□□ 0.44
COL1A1-205ENST00000476387 WDFY4Q6ZS81 3184 aa17.81■□□□□ 0.44
COL1A1-205ENST00000476387 TRIP11Q15643 1979 aa17.8■□□□□ 0.44
COL1A1-205ENST00000476387 SPDYE4A6NLX3 237 aa17.8■□□□□ 0.44
COL1A1-205ENST00000476387 K7ERI5 159 aa17.8■□□□□ 0.44
COL1A1-205ENST00000476387 C2CD2LO14523 706 aa17.8■□□□□ 0.44
COL1A1-205ENST00000476387 PDIA4P13667 645 aaKnown RBP17.8■□□□□ 0.44
COL1A1-205ENST00000476387 MARCKSP29966 332 aaPredicted RBP17.8■□□□□ 0.44
COL1A1-205ENST00000476387 TXLNAP40222 546 aa17.8■□□□□ 0.44
COL1A1-205ENST00000476387 NPTX2P47972 431 aa17.8■□□□□ 0.44
COL1A1-205ENST00000476387 SLC12A3P55017 1021 aa17.8■□□□□ 0.44
COL1A1-205ENST00000476387 GRIN1Q05586 938 aa17.8■□□□□ 0.44
COL1A1-205ENST00000476387 RAD51AP2Q09MP3 1159 aa17.8■□□□□ 0.44
COL1A1-205ENST00000476387 MTMR3Q13615 1198 aa17.8■□□□□ 0.44
COL1A1-205ENST00000476387 PTPAQ15257 358 aa17.8■□□□□ 0.44
COL1A1-205ENST00000476387 KANK3Q6NY19 840 aa17.8■□□□□ 0.44
COL1A1-205ENST00000476387 TMC5Q6UXY8 1006 aa17.8■□□□□ 0.44
COL1A1-205ENST00000476387 TAS1R1Q7RTX1 841 aa17.8■□□□□ 0.44
COL1A1-205ENST00000476387 APBB1IPQ7Z5R6 666 aaPredicted RBP17.8■□□□□ 0.44
COL1A1-205ENST00000476387 SUGP1Q8IWZ8 645 aaKnown RBP17.8■□□□□ 0.44
COL1A1-205ENST00000476387 DAW1Q8N136 415 aa17.8■□□□□ 0.44
COL1A1-205ENST00000476387 FBXL6Q8N531 539 aa17.8■□□□□ 0.44
COL1A1-205ENST00000476387 KREMEN2Q8NCW0 462 aa17.8■□□□□ 0.44
COL1A1-205ENST00000476387 PRRX2Q99811 253 aa17.8■□□□□ 0.44
COL1A1-205ENST00000476387 RHOBTB2Q9BYZ6 727 aa17.8■□□□□ 0.44
COL1A1-205ENST00000476387 PDZD7Q9H5P4 517 aa17.8■□□□□ 0.44
COL1A1-205ENST00000476387 KMT5AQ9NQR1 393 aa17.8■□□□□ 0.44
COL1A1-205ENST00000476387 CHST7Q9NS84 486 aa17.8■□□□□ 0.44
COL1A1-205ENST00000476387 SORCS3Q9UPU3 1222 aa17.8■□□□□ 0.44
COL1A1-205ENST00000476387 CITO14578 2027 aa17.8■□□□□ 0.44
COL1A1-205ENST00000476387 TEX28O15482 410 aa17.79■□□□□ 0.44
COL1A1-205ENST00000476387 GLUD1P00367 558 aa17.79■□□□□ 0.44
COL1A1-205ENST00000476387 PLCG1P19174 1290 aa17.79■□□□□ 0.44
COL1A1-205ENST00000476387 MAPK7Q13164 816 aa17.79■□□□□ 0.44
COL1A1-205ENST00000476387 KARSQ15046 597 aaKnown RBP17.79■□□□□ 0.44
COL1A1-205ENST00000476387 FUT10Q6P4F1 479 aa17.79■□□□□ 0.44
COL1A1-205ENST00000476387 CYP26C1Q6V0L0 522 aa17.79■□□□□ 0.44
COL1A1-205ENST00000476387 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.79■□□□□ 0.44
COL1A1-205ENST00000476387 KLK14Q9P0G3 267 aa17.79■□□□□ 0.44
COL1A1-205ENST00000476387 KCNG1Q9UIX4 513 aa17.79■□□□□ 0.44
COL1A1-205ENST00000476387 ADAM28Q9UKQ2 775 aa17.79■□□□□ 0.44
COL1A1-205ENST00000476387 RBM19Q9Y4C8 960 aaKnown RBP17.79■□□□□ 0.44
COL1A1-205ENST00000476387 SRPRBQ9Y5M8 271 aaKnown RBP17.79■□□□□ 0.44
COL1A1-205ENST00000476387 MYO10Q9HD67 2058 aa17.78■□□□□ 0.44
COL1A1-205ENST00000476387 TTLL13PA6NNM8 815 aa17.78■□□□□ 0.44
COL1A1-205ENST00000476387 F8W810 466 aa17.78■□□□□ 0.44
COL1A1-205ENST00000476387 SMTNP53814 917 aa17.78■□□□□ 0.44
COL1A1-205ENST00000476387 NHLH1Q02575 133 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms