RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 FAM102BQ5T8I3 360 aa6.45□□□□□ -1.38
PTCD3-211ENST00000476215 CATIPQ7Z7H3 387 aa6.45□□□□□ -1.38
PTCD3-211ENST00000476215 WDR75Q8IWA0 830 aaKnown RBP6.45□□□□□ -1.38
PTCD3-211ENST00000476215 RHOT1Q8IXI2 618 aa6.45□□□□□ -1.38
PTCD3-211ENST00000476215 PALM2Q8IXS6 379 aa6.45□□□□□ -1.38
PTCD3-211ENST00000476215 PQLC1Q8N2U9 271 aa6.45□□□□□ -1.38
PTCD3-211ENST00000476215 LILRA3Q8N6C8 439 aaPredicted RBP6.45□□□□□ -1.38
PTCD3-211ENST00000476215 OR7D4Q8NG98 312 aa6.45□□□□□ -1.38
PTCD3-211ENST00000476215 ARL8AQ96BM9 186 aa6.45□□□□□ -1.38
PTCD3-211ENST00000476215 FAM89AQ96GI7 184 aa6.45□□□□□ -1.38
PTCD3-211ENST00000476215 TMEM176AQ96HP8 235 aa6.45□□□□□ -1.38
PTCD3-211ENST00000476215 LRGUKQ96M69 825 aa6.45□□□□□ -1.38
PTCD3-211ENST00000476215 ADOQ96SZ5 270 aa6.45□□□□□ -1.38
PTCD3-211ENST00000476215 TCF25Q9BQ70 676 aa6.45□□□□□ -1.38
PTCD3-211ENST00000476215 BCO1Q9HAY6 547 aa6.45□□□□□ -1.38
PTCD3-211ENST00000476215 PCDHA13Q9Y5I0 950 aa6.45□□□□□ -1.38
PTCD3-211ENST00000476215 POU2F2P09086 479 aa6.44□□□□□ -1.38
PTCD3-211ENST00000476215 PDCP20941 246 aa6.44□□□□□ -1.38
PTCD3-211ENST00000476215 AKAP5P24588 427 aa6.44□□□□□ -1.38
PTCD3-211ENST00000476215 PTPN7P35236 360 aa6.44□□□□□ -1.38
PTCD3-211ENST00000476215 IL10RAQ13651 578 aa6.44□□□□□ -1.38
PTCD3-211ENST00000476215 MIIPQ5JXC2 388 aa6.44□□□□□ -1.38
PTCD3-211ENST00000476215 IFIT1BQ5T764 474 aaKnown RBP6.44□□□□□ -1.38
PTCD3-211ENST00000476215 RNF207Q6ZRF8 634 aa6.44□□□□□ -1.38
PTCD3-211ENST00000476215 MYO1HQ8N1T3 1032 aa6.44□□□□□ -1.38
PTCD3-211ENST00000476215 REPS2Q8NFH8 660 aa6.44□□□□□ -1.38
PTCD3-211ENST00000476215 FBXO18Q8NFZ0 1043 aa6.44□□□□□ -1.38
PTCD3-211ENST00000476215 MDM1Q8TC05 714 aa6.44□□□□□ -1.38
PTCD3-211ENST00000476215 CCHCR1Q8TD31 782 aa6.44□□□□□ -1.38
PTCD3-211ENST00000476215 PDCD2LQ9BRP1 358 aa6.44□□□□□ -1.38
PTCD3-211ENST00000476215 EPC1Q9H2F5 836 aa6.44□□□□□ -1.38
PTCD3-211ENST00000476215 MANSC1Q9H8J5 431 aa6.44□□□□□ -1.38
PTCD3-211ENST00000476215 PRPF3O43395 683 aaKnown RBP6.43□□□□□ -1.38
PTCD3-211ENST00000476215 DTNBO60941 627 aa6.43□□□□□ -1.38
PTCD3-211ENST00000476215 OFD1O75665 1012 aa6.43□□□□□ -1.38
PTCD3-211ENST00000476215 C6P13671 934 aa6.43□□□□□ -1.38
PTCD3-211ENST00000476215 SREBF1P36956 1147 aa6.43□□□□□ -1.38
PTCD3-211ENST00000476215 ACVRL1P37023 503 aa6.43□□□□□ -1.38
PTCD3-211ENST00000476215 SLC6A9P48067 706 aa6.43□□□□□ -1.38
PTCD3-211ENST00000476215 GZMKP49863 264 aa6.43□□□□□ -1.38
PTCD3-211ENST00000476215 GRM7Q14831 915 aa6.43□□□□□ -1.38
PTCD3-211ENST00000476215 MLC1Q15049 377 aa6.43□□□□□ -1.38
PTCD3-211ENST00000476215 PRAMEF14Q5SWL7 426 aa6.43□□□□□ -1.38
PTCD3-211ENST00000476215 CXorf57Q6NSI4 855 aaKnown RBP6.43□□□□□ -1.38
PTCD3-211ENST00000476215 PDZD4Q76G19 769 aaPredicted RBP6.43□□□□□ -1.38
PTCD3-211ENST00000476215 TRMT2AQ8IZ69 625 aaKnown RBP6.43□□□□□ -1.38
PTCD3-211ENST00000476215 KAT5Q92993 513 aa6.43□□□□□ -1.38
PTCD3-211ENST00000476215 RAB24Q969Q5 203 aa6.43□□□□□ -1.38
PTCD3-211ENST00000476215 CLIP3Q96DZ5 547 aa6.43□□□□□ -1.38
PTCD3-211ENST00000476215 ZNF503Q96F45 646 aa6.43□□□□□ -1.38
PTCD3-211ENST00000476215 IL17RAQ96F46 866 aa6.43□□□□□ -1.38
PTCD3-211ENST00000476215 MPHOSPH9Q99550 1183 aa6.43□□□□□ -1.38
PTCD3-211ENST00000476215 GTPBP4Q9BZE4 634 aaKnown RBP6.43□□□□□ -1.38
PTCD3-211ENST00000476215 SENP6Q9GZR1 1112 aaPredicted RBP6.43□□□□□ -1.38
PTCD3-211ENST00000476215 LDAHQ9H6V9 325 aa6.43□□□□□ -1.38
PTCD3-211ENST00000476215 LANCL2Q9NS86 450 aa6.43□□□□□ -1.38
PTCD3-211ENST00000476215 SIK3Q9Y2K2 1263 aa6.43□□□□□ -1.38
PTCD3-211ENST00000476215 PLSCR1O15162 318 aa6.42□□□□□ -1.38
PTCD3-211ENST00000476215 AP1G1O43747 822 aa6.42□□□□□ -1.38
PTCD3-211ENST00000476215 AKAP8O43823 692 aaKnown RBP6.42□□□□□ -1.38
PTCD3-211ENST00000476215 STC2O76061 302 aa6.42□□□□□ -1.38
PTCD3-211ENST00000476215 U2AF1L5P0DN76 240 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-211ENST00000476215 HSPA6P17066 643 aa6.42□□□□□ -1.38
PTCD3-211ENST00000476215 ACRV1P26436 265 aa6.42□□□□□ -1.38
PTCD3-211ENST00000476215 MSX2P35548 267 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-211ENST00000476215 U2AF1Q01081 240 aaKnown RBP eCLIP6.42□□□□□ -1.384e-6■■■□□ 19.2
PTCD3-211ENST00000476215 APBA1Q02410 837 aa6.42□□□□□ -1.38
PTCD3-211ENST00000476215 GTF2H3Q13889 308 aa6.42□□□□□ -1.38
PTCD3-211ENST00000476215 NXNQ6DKJ4 435 aa6.42□□□□□ -1.38
PTCD3-211ENST00000476215 PPP4R3AQ6IN85 833 aa6.42□□□□□ -1.38
PTCD3-211ENST00000476215 FAM111BQ6SJ93 734 aa6.42□□□□□ -1.38
PTCD3-211ENST00000476215 USP45Q70EL2 814 aa6.42□□□□□ -1.38
PTCD3-211ENST00000476215 TCEAL8Q8IYN2 117 aa6.42□□□□□ -1.38
PTCD3-211ENST00000476215 ZNF808Q8N4W9 903 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-211ENST00000476215 MAGEB6Q8N7X4 407 aa6.42□□□□□ -1.38
PTCD3-211ENST00000476215 STON2Q8WXE9 905 aa6.42□□□□□ -1.38
PTCD3-211ENST00000476215 AIFM3Q96NN9 605 aa6.42□□□□□ -1.38
PTCD3-211ENST00000476215 ENKD1Q9H0I2 346 aa6.42□□□□□ -1.38
PTCD3-211ENST00000476215 VPS11Q9H270 941 aa6.42□□□□□ -1.38
PTCD3-211ENST00000476215 ZNF703Q9H7S9 590 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-211ENST00000476215 NMRK2Q9NPI5 230 aa6.42□□□□□ -1.38
PTCD3-211ENST00000476215 TDP1Q9NUW8 608 aa6.42□□□□□ -1.38
PTCD3-211ENST00000476215 ZMYM3Q14202 1370 aa6.42□□□□□ -1.38
PTCD3-211ENST00000476215 KRTAP23-1A1A580 65 aa6.41□□□□□ -1.38
PTCD3-211ENST00000476215 FXR1P51114 621 aaKnown RBP eCLIP6.41□□□□□ -1.38
PTCD3-211ENST00000476215 MRPL49Q13405 166 aaKnown RBP6.41□□□□□ -1.38
PTCD3-211ENST00000476215 FOXE3Q13461 319 aa6.41□□□□□ -1.38
PTCD3-211ENST00000476215 ZNF267Q14586 743 aaPredicted RBP6.41□□□□□ -1.38
PTCD3-211ENST00000476215 FAM214AQ32MH5 1076 aa6.41□□□□□ -1.38
PTCD3-211ENST00000476215 FKBP15Q5T1M5 1219 aa6.41□□□□□ -1.38
PTCD3-211ENST00000476215 EPM2AIP1Q7L775 607 aaPredicted RBP6.41□□□□□ -1.38
PTCD3-211ENST00000476215 RSPH3Q86UC2 560 aa6.41□□□□□ -1.38
PTCD3-211ENST00000476215 GRAMD1CQ8IYS0 662 aa6.41□□□□□ -1.38
PTCD3-211ENST00000476215 PRR18Q8N4B5 295 aa6.41□□□□□ -1.38
PTCD3-211ENST00000476215 CYFIP2Q96F07 1278 aa6.41□□□□□ -1.38
PTCD3-211ENST00000476215 MAP3K14Q99558 947 aa6.41□□□□□ -1.38
PTCD3-211ENST00000476215 ANLNQ9NQW6 1124 aa6.41□□□□□ -1.38
PTCD3-211ENST00000476215 TMEM140Q9NV12 185 aa6.41□□□□□ -1.38
PTCD3-211ENST00000476215 AURKAIP1Q9NWT8 199 aaPredicted RBP6.41□□□□□ -1.38
PTCD3-211ENST00000476215 AJAP1Q9UKB5 411 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms