RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 CDT1Q9H211 546 aa23.25■■□□□ 1.31
LIME1-204ENST00000476183 ODF2LQ9ULJ1 636 aa23.25■■□□□ 1.31
LIME1-204ENST00000476183 IRAK3Q9Y616 596 aa23.25■■□□□ 1.31
LIME1-204ENST00000476183 FSD2A1L4K1 749 aa23.24■■□□□ 1.31
LIME1-204ENST00000476183 PROZP22891 400 aa23.24■■□□□ 1.31
LIME1-204ENST00000476183 DDIT3P35638 169 aa23.24■■□□□ 1.31
LIME1-204ENST00000476183 PKP1Q13835 747 aa23.24■■□□□ 1.31
LIME1-204ENST00000476183 PTPN14Q15678 1187 aa23.24■■□□□ 1.31
LIME1-204ENST00000476183 NAB2Q15742 525 aa23.24■■□□□ 1.31
LIME1-204ENST00000476183 RNF168Q8IYW5 571 aaPredicted RBP23.24■■□□□ 1.31
LIME1-204ENST00000476183 LINC00301Q8NCQ3 95 aa23.24■■□□□ 1.31
LIME1-204ENST00000476183 RABGGTAQ92696 567 aa23.24■■□□□ 1.31
LIME1-204ENST00000476183 TFIP11Q9UBB9 837 aaKnown RBP23.24■■□□□ 1.31
LIME1-204ENST00000476183 HCFC2Q9Y5Z7 792 aa23.24■■□□□ 1.31
LIME1-204ENST00000476183 ZNF131P52739 623 aa23.23■■□□□ 1.31
LIME1-204ENST00000476183 SMTNP53814 917 aa23.23■■□□□ 1.31
LIME1-204ENST00000476183 NCKAP1LP55160 1127 aa23.23■■□□□ 1.31
LIME1-204ENST00000476183 BMS1Q14692 1282 aaKnown RBP23.23■■□□□ 1.31
LIME1-204ENST00000476183 ZNF568Q3ZCX4 644 aa23.23■■□□□ 1.31
LIME1-204ENST00000476183 ZBTB33Q86T24 672 aa23.23■■□□□ 1.31
LIME1-204ENST00000476183 KRI1Q8N9T8 703 aaKnown RBP23.23■■□□□ 1.31
LIME1-204ENST00000476183 ZBTB45Q96K62 511 aaPredicted RBP23.23■■□□□ 1.31
LIME1-204ENST00000476183 PAAF1Q9BRP4 392 aa23.23■■□□□ 1.31
LIME1-204ENST00000476183 LARSQ9P2J5 1176 aaKnown RBP23.23■■□□□ 1.31
LIME1-204ENST00000476183 KCNG1Q9UIX4 513 aa23.23■■□□□ 1.31
LIME1-204ENST00000476183 FAM50BQ9Y247 325 aa23.23■■□□□ 1.31
LIME1-204ENST00000476183 LILRB3O75022 631 aa23.22■■□□□ 1.31
LIME1-204ENST00000476183 SOD2P04179 222 aa23.22■■□□□ 1.31
LIME1-204ENST00000476183 ZSCAN22P10073 491 aaPredicted RBP23.22■■□□□ 1.31
LIME1-204ENST00000476183 TUSC3Q13454 348 aa23.22■■□□□ 1.31
LIME1-204ENST00000476183 STK38Q15208 465 aa23.22■■□□□ 1.31
LIME1-204ENST00000476183 ANKRD54Q6NXT1 300 aa23.22■■□□□ 1.31
LIME1-204ENST00000476183 SYCE2Q6PIF2 218 aa23.22■■□□□ 1.31
LIME1-204ENST00000476183 HERC2P3Q9BVR0 1158 aa23.22■■□□□ 1.31
LIME1-204ENST00000476183 STK39Q9UEW8 545 aa23.22■■□□□ 1.31
LIME1-204ENST00000476183 CCDC39Q9UFE4 941 aa23.22■■□□□ 1.31
LIME1-204ENST00000476183 A0A087X0B3 334 aa23.21■■□□□ 1.31
LIME1-204ENST00000476183 CASTOR2A6NHX0 329 aa23.21■■□□□ 1.31
LIME1-204ENST00000476183 NR1I2O75469 434 aa23.21■■□□□ 1.31
LIME1-204ENST00000476183 FAM13AO94988 1023 aa23.21■■□□□ 1.31
LIME1-204ENST00000476183 THP07101 528 aa23.21■■□□□ 1.31
LIME1-204ENST00000476183 GRM5P41594 1212 aa23.21■■□□□ 1.31
LIME1-204ENST00000476183 OSTNP61366 133 aa23.21■■□□□ 1.31
LIME1-204ENST00000476183 ZP2Q05996 745 aa23.21■■□□□ 1.31
LIME1-204ENST00000476183 STRN3Q13033 797 aa23.21■■□□□ 1.31
LIME1-204ENST00000476183 RRAGBQ5VZM2 374 aa23.21■■□□□ 1.31
LIME1-204ENST00000476183 MPZL3Q6UWV2 235 aa23.21■■□□□ 1.31
LIME1-204ENST00000476183 HAUS6Q7Z4H7 955 aa23.21■■□□□ 1.31
LIME1-204ENST00000476183 APBB1IPQ7Z5R6 666 aaPredicted RBP23.21■■□□□ 1.31
LIME1-204ENST00000476183 MYCT1Q8N699 235 aa23.21■■□□□ 1.31
LIME1-204ENST00000476183 KHSRPQ92945 711 aaKnown RBP eCLIP23.21■■□□□ 1.31
LIME1-204ENST00000476183 KCNN1Q92952 543 aa23.21■■□□□ 1.31
LIME1-204ENST00000476183 ZNF396Q96N95 335 aaPredicted RBP23.21■■□□□ 1.31
LIME1-204ENST00000476183 FIZ1Q96SL8 496 aa23.21■■□□□ 1.31
LIME1-204ENST00000476183 COLEC11Q9BWP8 271 aa23.21■■□□□ 1.31
LIME1-204ENST00000476183 GPR62Q9BZJ7 368 aa23.21■■□□□ 1.31
LIME1-204ENST00000476183 S1PR5Q9H228 398 aa23.21■■□□□ 1.31
LIME1-204ENST00000476183 PARVGQ9HBI0 331 aa23.21■■□□□ 1.31
LIME1-204ENST00000476183 STK17AQ9UEE5 414 aa23.21■■□□□ 1.31
LIME1-204ENST00000476183 DAXXQ9UER7 740 aaPredicted RBP23.21■■□□□ 1.31
LIME1-204ENST00000476183 USP15Q9Y4E8 981 aaPredicted RBP23.21■■□□□ 1.31
LIME1-204ENST00000476183 BRD1O95696 1058 aa23.2■■□□□ 1.3
LIME1-204ENST00000476183 F13A1P00488 732 aa23.2■■□□□ 1.3
LIME1-204ENST00000476183 KRT18P05783 430 aaKnown RBP23.2■■□□□ 1.3
LIME1-204ENST00000476183 MCF2P10911 925 aa23.2■■□□□ 1.3
LIME1-204ENST00000476183 FOXD4L6Q3SYB3 417 aaPredicted RBP23.2■■□□□ 1.3
LIME1-204ENST00000476183 GLRA4Q5JXX5 417 aa23.2■■□□□ 1.3
LIME1-204ENST00000476183 FOXD4L3Q6VB84 417 aaPredicted RBP23.2■■□□□ 1.3
LIME1-204ENST00000476183 GJD3Q8N144 294 aa23.2■■□□□ 1.3
LIME1-204ENST00000476183 TCHPQ9BT92 498 aa23.2■■□□□ 1.3
LIME1-204ENST00000476183 APOL5Q9BWW9 433 aa23.2■■□□□ 1.3
LIME1-204ENST00000476183 PANK2Q9BZ23 570 aa23.2■■□□□ 1.3
LIME1-204ENST00000476183 PRKAG3Q9UGI9 489 aa23.2■■□□□ 1.3
LIME1-204ENST00000476183 C2CD2LO14523 706 aa23.19■■□□□ 1.3
LIME1-204ENST00000476183 SPTLC2O15270 562 aa23.19■■□□□ 1.3
LIME1-204ENST00000476183 MEFVO15553 781 aaPredicted RBP23.19■■□□□ 1.3
LIME1-204ENST00000476183 TOM1L1O75674 476 aa23.19■■□□□ 1.3
LIME1-204ENST00000476183 CNPP09543 421 aaKnown RBP23.19■■□□□ 1.3
LIME1-204ENST00000476183 SRGAP2BP0DMP2 458 aa23.19■■□□□ 1.3
LIME1-204ENST00000476183 HARSP12081 509 aaKnown RBP23.19■■□□□ 1.3
LIME1-204ENST00000476183 EPCAMP16422 314 aa23.19■■□□□ 1.3
LIME1-204ENST00000476183 TXLNAP40222 546 aa23.19■■□□□ 1.3
LIME1-204ENST00000476183 HSP90AA2PQ14568 343 aaPredicted RBP23.19■■□□□ 1.3
LIME1-204ENST00000476183 KIAA0319Q5VV43 1072 aa23.19■■□□□ 1.3
LIME1-204ENST00000476183 FUT10Q6P4F1 479 aa23.19■■□□□ 1.3
LIME1-204ENST00000476183 ALKAL1Q6UXT8 129 aa23.19■■□□□ 1.3
LIME1-204ENST00000476183 ZPBP2Q6X784 338 aa23.19■■□□□ 1.3
LIME1-204ENST00000476183 ADHFE1Q8IWW8 467 aa23.19■■□□□ 1.3
LIME1-204ENST00000476183 SLC22A17Q8WUG5 538 aa23.19■■□□□ 1.3
LIME1-204ENST00000476183 SUSD6Q92537 303 aa23.19■■□□□ 1.3
LIME1-204ENST00000476183 CASP10Q92851 521 aa23.19■■□□□ 1.3
LIME1-204ENST00000476183 B3GALT6Q96L58 329 aa23.19■■□□□ 1.3
LIME1-204ENST00000476183 KLHL5Q96PQ7 755 aa23.19■■□□□ 1.3
LIME1-204ENST00000476183 PPP1R10Q96QC0 940 aaKnown RBP23.19■■□□□ 1.3
LIME1-204ENST00000476183 CCDC94Q9BW85 323 aaPredicted RBP23.19■■□□□ 1.3
LIME1-204ENST00000476183 HAPLN2Q9GZV7 340 aa23.19■■□□□ 1.3
LIME1-204ENST00000476183 ZHX3Q9H4I2 956 aa23.19■■□□□ 1.3
LIME1-204ENST00000476183 MRPL17Q9NRX2 175 aaKnown RBP23.19■■□□□ 1.3
LIME1-204ENST00000476183 ANKFY1Q9P2R3 1169 aa23.19■■□□□ 1.3
LIME1-204ENST00000476183 ADAM28Q9UKQ2 775 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms