RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 AFAP1L1Q8TED9 768 aa17.2■□□□□ 0.34
VARS2-207ENST00000476162 CTTNBP2NLQ9P2B4 639 aa17.2■□□□□ 0.34
VARS2-207ENST00000476162 CHORDC1Q9UHD1 332 aaPredicted RBP17.2■□□□□ 0.34
VARS2-207ENST00000476162 SNCAIPQ9Y6H5 919 aa17.2■□□□□ 0.34
VARS2-207ENST00000476162 CCDC188H7C350 402 aa17.2■□□□□ 0.34
VARS2-207ENST00000476162 RTN2O75298 545 aa17.2■□□□□ 0.34
VARS2-207ENST00000476162 FGGP02679 453 aa17.2■□□□□ 0.34
VARS2-207ENST00000476162 GPC5P78333 572 aa17.2■□□□□ 0.34
VARS2-207ENST00000476162 KCTD19Q17RG1 926 aaPredicted RBP17.2■□□□□ 0.34
VARS2-207ENST00000476162 ALS2CLQ60I27 953 aa17.2■□□□□ 0.34
VARS2-207ENST00000476162 CHST13Q8NET6 341 aa17.2■□□□□ 0.34
VARS2-207ENST00000476162 CNKSR2Q8WXI2 1034 aa17.2■□□□□ 0.34
VARS2-207ENST00000476162 FAM84AQ96KN4 292 aa17.2■□□□□ 0.34
VARS2-207ENST00000476162 HSF2BPO75031 334 aa17.19■□□□□ 0.34
VARS2-207ENST00000476162 MMEP08473 750 aa17.19■□□□□ 0.34
VARS2-207ENST00000476162 GARTP22102 1010 aa17.19■□□□□ 0.34
VARS2-207ENST00000476162 LIG3P49916 1009 aa17.19■□□□□ 0.34
VARS2-207ENST00000476162 POLGP54098 1239 aaPredicted RBP17.19■□□□□ 0.34
VARS2-207ENST00000476162 EMC2Q15006 297 aa17.19■□□□□ 0.34
VARS2-207ENST00000476162 USP37Q86T82 979 aa17.19■□□□□ 0.34
VARS2-207ENST00000476162 DNERQ8NFT8 737 aa17.19■□□□□ 0.34
VARS2-207ENST00000476162 TMEM143Q96AN5 459 aa17.19■□□□□ 0.34
VARS2-207ENST00000476162 NT5C1BQ96P26 610 aa17.19■□□□□ 0.34
VARS2-207ENST00000476162 ZNF302Q9NR11 478 aa17.19■□□□□ 0.34
VARS2-207ENST00000476162 AMACRQ9UHK6 382 aa17.19■□□□□ 0.34
VARS2-207ENST00000476162 ALG6Q9Y672 507 aa17.19■□□□□ 0.34
VARS2-207ENST00000476162 SYNGAP1Q96PV0 1343 aa17.19■□□□□ 0.34
VARS2-207ENST00000476162 SRCAPQ6ZRS2 3230 aa17.19■□□□□ 0.34
VARS2-207ENST00000476162 GTF2H1P32780 548 aa17.19■□□□□ 0.34
VARS2-207ENST00000476162 ICAM3P32942 547 aa17.19■□□□□ 0.34
VARS2-207ENST00000476162 HADHBP55084 474 aaKnown RBP17.19■□□□□ 0.34
VARS2-207ENST00000476162 LBX2Q6XYB7 198 aa17.19■□□□□ 0.34
VARS2-207ENST00000476162 CCDC125Q86Z20 511 aa17.19■□□□□ 0.34
VARS2-207ENST00000476162 TATDN2Q93075 761 aa17.19■□□□□ 0.34
VARS2-207ENST00000476162 SH3GL2Q99962 352 aa17.19■□□□□ 0.34
VARS2-207ENST00000476162 MAF1Q9H063 256 aa17.19■□□□□ 0.34
VARS2-207ENST00000476162 TAF1DQ9H5J8 278 aaPredicted RBP17.19■□□□□ 0.34
VARS2-207ENST00000476162 BTBD7Q9P203 1132 aa17.19■□□□□ 0.34
VARS2-207ENST00000476162 TTC7AQ9ULT0 858 aaPredicted RBP17.19■□□□□ 0.34
VARS2-207ENST00000476162 MAFBQ9Y5Q3 323 aaPredicted RBP17.19■□□□□ 0.34
VARS2-207ENST00000476162 ATG7O95352 703 aa17.18■□□□□ 0.34
VARS2-207ENST00000476162 GZMAP12544 262 aa17.18■□□□□ 0.34
VARS2-207ENST00000476162 CYP11B1P15538 503 aa17.18■□□□□ 0.34
VARS2-207ENST00000476162 FMO1Q01740 532 aa17.18■□□□□ 0.34
VARS2-207ENST00000476162 NAA35Q5VZE5 725 aa17.18■□□□□ 0.34
VARS2-207ENST00000476162 DHX38Q92620 1227 aaKnown RBP17.18■□□□□ 0.34
VARS2-207ENST00000476162 ZIM3Q96PE6 472 aa17.18■□□□□ 0.34
VARS2-207ENST00000476162 TACO1Q9BSH4 297 aaKnown RBP17.18■□□□□ 0.34
VARS2-207ENST00000476162 PI4K2AQ9BTU6 479 aa17.18■□□□□ 0.34
VARS2-207ENST00000476162 CARD9Q9H257 536 aa17.18■□□□□ 0.34
VARS2-207ENST00000476162 NR2E1Q9Y466 385 aa17.18■□□□□ 0.34
VARS2-207ENST00000476162 ARID2Q68CP9 1835 aa17.18■□□□□ 0.34
VARS2-207ENST00000476162 ZNF233A6NK53 670 aa17.17■□□□□ 0.34
VARS2-207ENST00000476162 OATP04181 439 aa17.17■□□□□ 0.34
VARS2-207ENST00000476162 LIG4P49917 911 aa17.17■□□□□ 0.34
VARS2-207ENST00000476162 ALDH5A1P51649 535 aaPredicted RBP17.17■□□□□ 0.34
VARS2-207ENST00000476162 ZNF211Q13398 564 aaPredicted RBP17.17■□□□□ 0.34
VARS2-207ENST00000476162 HLTFQ14527 1009 aaKnown RBP eCLIP17.17■□□□□ 0.34
VARS2-207ENST00000476162 TCEAL1Q15170 157 aa17.17■□□□□ 0.34
VARS2-207ENST00000476162 FBXW10Q5XX13 1052 aa17.17■□□□□ 0.34
VARS2-207ENST00000476162 DDX42Q86XP3 938 aaKnown RBP eCLIP17.17■□□□□ 0.34
VARS2-207ENST00000476162 WHAMMQ8TF30 809 aa17.17■□□□□ 0.34
VARS2-207ENST00000476162 ALG3Q92685 438 aa17.17■□□□□ 0.34
VARS2-207ENST00000476162 RNPC3Q96LT9 517 aaKnown RBP17.17■□□□□ 0.34
VARS2-207ENST00000476162 RUFY1Q96T51 708 aa17.17■□□□□ 0.34
VARS2-207ENST00000476162 DIS3Q9Y2L1 958 aaKnown RBP17.17■□□□□ 0.34
VARS2-207ENST00000476162 POLR2AP24928 1970 aaKnown RBP17.17■□□□□ 0.34
VARS2-207ENST00000476162 GOLGA6CA6NDK9 693 aa17.17■□□□□ 0.34
VARS2-207ENST00000476162 TMEM110-MUSTN1A8MSY1 372 aa17.17■□□□□ 0.34
VARS2-207ENST00000476162 H0YCG3 227 aa17.17■□□□□ 0.34
VARS2-207ENST00000476162 ATMINO43313 823 aaPredicted RBP17.17■□□□□ 0.34
VARS2-207ENST00000476162 OPA1O60313 960 aa17.17■□□□□ 0.34
VARS2-207ENST00000476162 GOLGA6DP0CG33 693 aa17.17■□□□□ 0.34
VARS2-207ENST00000476162 ECHS1P30084 290 aa17.17■□□□□ 0.34
VARS2-207ENST00000476162 IQCKQ8N0W5 287 aa17.17■□□□□ 0.34
VARS2-207ENST00000476162 ASAP3Q8TDY4 903 aa17.17■□□□□ 0.34
VARS2-207ENST00000476162 ZNF516Q92618 1163 aa17.17■□□□□ 0.34
VARS2-207ENST00000476162 SLITRK6Q9H5Y7 841 aa17.17■□□□□ 0.34
VARS2-207ENST00000476162 GOLGA6AQ9NYA3 693 aa17.17■□□□□ 0.34
VARS2-207ENST00000476162 LCTP09848 1927 aa17.17■□□□□ 0.34
VARS2-207ENST00000476162 EXTL3O43909 919 aa17.16■□□□□ 0.34
VARS2-207ENST00000476162 PDE6CP51160 858 aa17.16■□□□□ 0.34
VARS2-207ENST00000476162 LMBRD2Q68DH5 695 aaPredicted RBP17.16■□□□□ 0.34
VARS2-207ENST00000476162 C11orf63Q6NUN7 778 aa17.16■□□□□ 0.34
VARS2-207ENST00000476162 ADAT2Q7Z6V5 191 aaKnown RBP17.16■□□□□ 0.34
VARS2-207ENST00000476162 MREGQ8N565 214 aa17.16■□□□□ 0.34
VARS2-207ENST00000476162 PORCNQ9H237 461 aa17.16■□□□□ 0.34
VARS2-207ENST00000476162 DHX33Q9H6R0 707 aaKnown RBP17.16■□□□□ 0.34
VARS2-207ENST00000476162 MYH9P35579 1960 aaKnown RBP17.16■□□□□ 0.34
VARS2-207ENST00000476162 BHMG1C9JSJ3 638 aaPredicted RBP17.16■□□□□ 0.34
VARS2-207ENST00000476162 TTI1O43156 1089 aa17.16■□□□□ 0.34
VARS2-207ENST00000476162 GLRA2P23416 452 aa17.16■□□□□ 0.34
VARS2-207ENST00000476162 CDR2Q01850 454 aa17.16■□□□□ 0.34
VARS2-207ENST00000476162 STRN3Q13033 797 aa17.16■□□□□ 0.34
VARS2-207ENST00000476162 CUL1Q13616 776 aa17.16■□□□□ 0.34
VARS2-207ENST00000476162 MESDQ14696 234 aa17.16■□□□□ 0.34
VARS2-207ENST00000476162 CFAP58Q5T655 872 aa17.16■□□□□ 0.34
VARS2-207ENST00000476162 MAATS1Q7Z4T9 603 aa17.16■□□□□ 0.34
VARS2-207ENST00000476162 EIF1ADQ8N9N8 165 aaKnown RBP17.16■□□□□ 0.34
VARS2-207ENST00000476162 CCDC26Q8TAB7 109 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms