RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 CUL1Q13616 776 aa9.61□□□□□ -0.87
CCDC66-216ENST00000476142 PHLDB2Q86SQ0 1253 aa9.61□□□□□ -0.87
CCDC66-216ENST00000476142 SH2D3CQ8N5H7 860 aa9.61□□□□□ -0.87
CCDC66-216ENST00000476142 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.61□□□□□ -0.87
CCDC66-216ENST00000476142 ASAP3Q8TDY4 903 aa9.61□□□□□ -0.87
CCDC66-216ENST00000476142 PDLIM7Q9NR12 457 aa9.61□□□□□ -0.87
CCDC66-216ENST00000476142 C1orf112Q9NSG2 853 aa9.61□□□□□ -0.87
CCDC66-216ENST00000476142 UTP11Q9Y3A2 253 aaKnown RBP9.61□□□□□ -0.87
CCDC66-216ENST00000476142 ATP4AP20648 1035 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 GARTP22102 1010 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 PIK3CAP42336 1068 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 NLRP11P59045 1033 aaKnown RBP9.6□□□□□ -0.87
CCDC66-216ENST00000476142 CDR2Q01850 454 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 CPNE8Q86YQ8 564 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 ZNF564Q8TBZ8 553 aaPredicted RBP9.6□□□□□ -0.87
CCDC66-216ENST00000476142 SLC7A3Q8WY07 619 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 ZBTB45Q96K62 511 aaPredicted RBP9.6□□□□□ -0.87
CCDC66-216ENST00000476142 FBXL18Q96ME1 805 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 NAP1L3Q99457 506 aaPredicted RBP9.6□□□□□ -0.87
CCDC66-216ENST00000476142 SH3GL2Q99962 352 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 CARD9Q9H257 536 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 NEUROG2Q9H2A3 272 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 RABEP2Q9H5N1 569 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 SLITRK6Q9H5Y7 841 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 ERVK-5Q9HDB9 667 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 BTBD7Q9P203 1132 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 ARHGAP28Q9P2N2 729 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 PLAAQ9Y263 795 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 SNCAIPQ9Y6H5 919 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 COL11A1P12107 1806 aaPredicted RBP9.6□□□□□ -0.87
CCDC66-216ENST00000476142 ADM5C9JUS6 153 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 H0YCG3 227 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 K7ERI5 159 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 PMM2O15305 246 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 EXTL3O43909 919 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 ALDH5A1P51649 535 aaPredicted RBP9.6□□□□□ -0.87
CCDC66-216ENST00000476142 DR1Q01658 176 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 LLGL1Q15334 1064 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 SEZ6Q53EL9 994 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 WDR44Q5JSH3 913 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 NOL9Q5SY16 702 aaKnown RBP9.6□□□□□ -0.87
CCDC66-216ENST00000476142 C11orf63Q6NUN7 778 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 GPC2Q8N158 579 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 CHST13Q8NET6 341 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 ZSWIM1Q9BR11 485 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 CWC15Q9P013 229 aaKnown RBP9.6□□□□□ -0.87
CCDC66-216ENST00000476142 AGO2Q9UKV8 859 aaKnown RBP9.6□□□□□ -0.87
CCDC66-216ENST00000476142 DIS3Q9Y2L1 958 aaKnown RBP9.6□□□□□ -0.87
CCDC66-216ENST00000476142 COQ4Q9Y3A0 265 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 PPP2R3BQ9Y5P8 575 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 CSADQ9Y600 493 aa9.6□□□□□ -0.87
CCDC66-216ENST00000476142 SYNGAP1Q96PV0 1343 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 UBA1P22314 1058 aaKnown RBP9.59□□□□□ -0.87
CCDC66-216ENST00000476142 GLRA2P23416 452 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 ECHS1P30084 290 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 GTF2H1P32780 548 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 ATP1A2P50993 1020 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 WNT7BP56706 349 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 RTP1P59025 263 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 CEP85LQ5SZL2 805 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 SPOPLQ6IQ16 392 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 FOXR1Q6PIV2 292 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 DNERQ8NFT8 737 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 UBLCP1Q8WVY7 318 aaPredicted RBP9.59□□□□□ -0.87
CCDC66-216ENST00000476142 PIK3R5Q8WYR1 880 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 ZNF516Q92618 1163 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 GLG1Q92896 1179 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 OTUD5Q96G74 571 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 MSTO1Q9BUK6 570 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 TARS2Q9BW92 718 aaKnown RBP9.59□□□□□ -0.87
CCDC66-216ENST00000476142 ELP3Q9H9T3 547 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 TRPC6Q9Y210 931 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 MIF4GDA9UHW6 222 aaKnown RBP9.59□□□□□ -0.87
CCDC66-216ENST00000476142 DDNO94850 711 aaPredicted RBP9.59□□□□□ -0.87
CCDC66-216ENST00000476142 GZMAP12544 262 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 MARK3P27448 753 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 SSTR3P32745 418 aaPredicted RBP9.59□□□□□ -0.87
CCDC66-216ENST00000476142 FLT3P36888 993 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 IRX3P78415 501 aaPredicted RBP9.59□□□□□ -0.87
CCDC66-216ENST00000476142 PPARDQ03181 441 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 ZBTB41Q5SVQ8 909 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 SEL1L2Q5TEA6 688 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 LRRC31Q6UY01 552 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 IQCKQ8N0W5 287 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 OR2W6PQ8NHA6 318 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 PORCNQ9H237 461 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 RBAKQ9NYW8 714 aaPredicted RBP9.59□□□□□ -0.87
CCDC66-216ENST00000476142 CNOT8Q9UFF9 292 aaKnown RBP9.59□□□□□ -0.87
CCDC66-216ENST00000476142 MAFBQ9Y5Q3 323 aaPredicted RBP9.59□□□□□ -0.87
CCDC66-216ENST00000476142 DOCK5Q9H7D0 1870 aa9.59□□□□□ -0.87
CCDC66-216ENST00000476142 GOLGA6L10A6NI86 522 aa9.58□□□□□ -0.88
CCDC66-216ENST00000476142 HLA-DRAP01903 254 aa9.58□□□□□ -0.88
CCDC66-216ENST00000476142 CTNNA1P35221 906 aaKnown RBP9.58□□□□□ -0.88
CCDC66-216ENST00000476142 HSD17B3P37058 310 aa9.58□□□□□ -0.88
CCDC66-216ENST00000476142 HSPA9P38646 679 aaKnown RBP9.58□□□□□ -0.88
CCDC66-216ENST00000476142 PTENP60484 403 aa9.58□□□□□ -0.88
CCDC66-216ENST00000476142 C2CD6Q53TS8 623 aa9.58□□□□□ -0.88
CCDC66-216ENST00000476142 LBX2Q6XYB7 198 aa9.58□□□□□ -0.88
CCDC66-216ENST00000476142 SULF1Q8IWU6 871 aa9.58□□□□□ -0.88
CCDC66-216ENST00000476142 MREGQ8N565 214 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms