RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 ACSBG2Q5FVE4 666 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 FAM47AQ5JRC9 791 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 CCDC137Q6PK04 289 aaKnown RBP11.26□□□□□ -0.61
ABCF1-205ENST00000475993 KRT25Q7Z3Z0 450 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 CCDC25Q86WR0 208 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 SCUBE1Q8IWY4 988 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 ZNF184Q99676 751 aaPredicted RBP11.26□□□□□ -0.61
ABCF1-205ENST00000475993 ARHGEF38Q9NXL2 777 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 STX18Q9P2W9 335 aaKnown RBP11.26□□□□□ -0.61
ABCF1-205ENST00000475993 PHTF1Q9UMS5 762 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 N6AMT1Q9Y5N5 214 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 ACTL7BQ9Y614 415 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 COL1A1P02452 1464 aaPredicted RBP11.26□□□□□ -0.61
ABCF1-205ENST00000475993 IGSF9BQ9UPX0 1349 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 TP73O15350 636 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 KRT36O76013 467 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 WDR4P57081 412 aaKnown RBP11.26□□□□□ -0.61
ABCF1-205ENST00000475993 NONOQ15233 471 aaKnown RBP eCLIP11.26□□□□□ -0.61
ABCF1-205ENST00000475993 WDR72Q3MJ13 1102 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 LIN52Q52LA3 116 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 FAM26FQ5R3K3 315 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 AADACL2Q6P093 401 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 RGS9BPQ6ZS82 235 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 NEK8Q86SG6 692 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 KBTBD2Q8IY47 623 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 CYP4X1Q8N118 509 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 PPFIBP2Q8ND30 876 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 LNX1Q8TBB1 728 aaPredicted RBP11.26□□□□□ -0.61
ABCF1-205ENST00000475993 USP33Q8TEY7 942 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 C10orf82Q8WW14 230 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 SIKE1Q9BRV8 207 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 TCHPQ9BT92 498 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 CADM1Q9BY67 442 aaKnown RBP11.26□□□□□ -0.61
ABCF1-205ENST00000475993 FGFBP2Q9BYJ0 223 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 KCTD10Q9H3F6 313 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 PFDN4Q9NQP4 134 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 SAR1AQ9NR31 198 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 KRT82Q9NSB4 513 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 TRPM3Q9HCF6 1732 aaPredicted RBP11.26□□□□□ -0.61
ABCF1-205ENST00000475993 ATP9BO43861 1147 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 MYCLP1P12525 358 aaPredicted RBP11.26□□□□□ -0.61
ABCF1-205ENST00000475993 BCAMP50895 628 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 FXR2P51116 673 aaKnown RBP eCLIP11.26□□□□□ -0.611e-7■■■□□ 17.3
ABCF1-205ENST00000475993 CDR2Q01850 454 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 ORC2Q13416 577 aaPredicted RBP11.26□□□□□ -0.61
ABCF1-205ENST00000475993 ITGA7Q13683 1181 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 CYP1B1Q16678 543 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 EXOC3L4Q17RC7 722 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 CTC1Q2NKJ3 1217 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 CERKLQ49MI3 558 aaPredicted RBP11.26□□□□□ -0.61
ABCF1-205ENST00000475993 KCNK18Q7Z418 384 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 HEATR3Q7Z4Q2 680 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 CDK5RAP3Q96JB5 506 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 MTMR9Q96QG7 549 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 SPZ1Q9BXG8 430 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 METTL5Q9NRN9 209 aaKnown RBP11.26□□□□□ -0.61
ABCF1-205ENST00000475993 HSFX1Q9UBD0 423 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 CIDEBQ9UHD4 219 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 AJAP1Q9UKB5 411 aaPredicted RBP11.26□□□□□ -0.61
ABCF1-205ENST00000475993 CROTQ9UKG9 612 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 HDAC9Q9UKV0 1011 aa11.26□□□□□ -0.61
ABCF1-205ENST00000475993 PASKQ96RG2 1323 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 A0A0J9YVX5 310 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 HTR3EA5X5Y0 456 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 MAP3K7O43318 606 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 PSMG1O95456 288 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 TTC4O95801 387 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 BCRP11274 1271 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 STIP1P31948 543 aaKnown RBP11.25□□□□□ -0.61
ABCF1-205ENST00000475993 TXKP42681 527 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 TRPC1P48995 793 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 PSMD7P51665 324 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 RTP1P59025 263 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 TMEM119Q4V9L6 283 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 TAF1BQ53T94 588 aaPredicted RBP11.25□□□□□ -0.61
ABCF1-205ENST00000475993 NLRP10Q86W26 655 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 SAMD3Q8N6K7 520 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 POLR3CQ9BUI4 534 aaPredicted RBP11.25□□□□□ -0.61
ABCF1-205ENST00000475993 ASCC2Q9H1I8 757 aaPredicted RBP11.25□□□□□ -0.61
ABCF1-205ENST00000475993 SIX2Q9NPC8 291 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 ZNF212Q9UDV6 495 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 PCDHA2Q9Y5H9 948 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 IRS4O14654 1257 aaPredicted RBP11.25□□□□□ -0.61
ABCF1-205ENST00000475993 CYTH3O43739 400 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 ASMTLO95671 621 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 GGPS1O95749 300 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 UBTFL6P0CB48 400 aaPredicted RBP11.25□□□□□ -0.61
ABCF1-205ENST00000475993 MUTP22033 750 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 CDK7P50613 346 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 EVX2Q03828 476 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 DNAJC3Q13217 504 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 SLC45A4Q5BKX6 768 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 ZNF362Q5T0B9 420 aaPredicted RBP11.25□□□□□ -0.61
ABCF1-205ENST00000475993 TMEM63BQ5T3F8 832 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 SRRM1Q8IYB3 904 aaKnown RBP11.25□□□□□ -0.61
ABCF1-205ENST00000475993 SH3RF3Q8TEJ3 882 aaPredicted RBP11.25□□□□□ -0.61
ABCF1-205ENST00000475993 DDX50Q9BQ39 737 aaKnown RBP11.25□□□□□ -0.61
ABCF1-205ENST00000475993 CENPKQ9BS16 269 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 OSBPL10Q9BXB5 764 aa11.25□□□□□ -0.61
ABCF1-205ENST00000475993 SYNCQ9H7C4 482 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms