RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 CASP10Q92851 521 aa12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 ASIC4Q96FT7 647 aa12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 PNMA5Q96PV4 448 aa12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 KMT5AQ9NQR1 393 aa12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 PARP2Q9UGN5 583 aa12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 KCNG1Q9UIX4 513 aa12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 IRAK3Q9Y616 596 aa12.54□□□□□ -0.4
NUDCD3-206ENST00000475952 NRP1O14786 923 aa12.53□□□□□ -0.4
NUDCD3-206ENST00000475952 CXCL14O95715 111 aa12.53□□□□□ -0.4
NUDCD3-206ENST00000475952 URODP06132 367 aa12.53□□□□□ -0.4
NUDCD3-206ENST00000475952 SYT1P21579 422 aa12.53□□□□□ -0.4
NUDCD3-206ENST00000475952 NPTX2P47972 431 aa12.53□□□□□ -0.4
NUDCD3-206ENST00000475952 DSC1Q08554 894 aa12.53□□□□□ -0.4
NUDCD3-206ENST00000475952 SIGLEC14Q08ET2 396 aa12.53□□□□□ -0.4
NUDCD3-206ENST00000475952 KCNC3Q14003 757 aa12.53□□□□□ -0.4
NUDCD3-206ENST00000475952 TMEM119Q4V9L6 283 aa12.53□□□□□ -0.4
NUDCD3-206ENST00000475952 ATF7IP2Q5U623 682 aa12.53□□□□□ -0.4
NUDCD3-206ENST00000475952 C1orf186Q6ZWK4 172 aa12.53□□□□□ -0.4
NUDCD3-206ENST00000475952 DAW1Q8N136 415 aa12.53□□□□□ -0.4
NUDCD3-206ENST00000475952 SYT2Q8N9I0 419 aaPredicted RBP12.53□□□□□ -0.4
NUDCD3-206ENST00000475952 VN1R2Q8NFZ6 395 aa12.53□□□□□ -0.4
NUDCD3-206ENST00000475952 PLIN2Q99541 437 aa12.53□□□□□ -0.4
NUDCD3-206ENST00000475952 POLD4Q9HCU8 107 aa12.53□□□□□ -0.4
NUDCD3-206ENST00000475952 PRG3Q9Y2Y8 225 aaPredicted RBP12.53□□□□□ -0.4
NUDCD3-206ENST00000475952 RBM19Q9Y4C8 960 aaKnown RBP12.53□□□□□ -0.4
NUDCD3-206ENST00000475952 GTF3C3Q9Y5Q9 886 aa12.53□□□□□ -0.4
NUDCD3-206ENST00000475952 HCFC2Q9Y5Z7 792 aa12.53□□□□□ -0.4
NUDCD3-206ENST00000475952 DOCK8Q8NF50 2099 aa12.52□□□□□ -0.4
NUDCD3-206ENST00000475952 TTLL13PA6NNM8 815 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 CLASP2O75122 1294 aaKnown RBP12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 RECQL4O94761 1208 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 SOD2P04179 222 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 EDN1P05305 212 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 PLA2G4BP0C869 781 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 HOXB8P17481 243 aaPredicted RBP12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 SMTNP53814 917 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 SLC12A3P55017 1021 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 RBM10P98175 930 aaKnown RBP12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 RESTQ13127 1097 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 MAPK7Q13164 816 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 PTPN14Q15678 1187 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 ZNF568Q3ZCX4 644 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 ANKRD54Q6NXT1 300 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 HSCBQ8IWL3 235 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 AUTS2Q8WXX7 1259 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 ATOH1Q92858 354 aaPredicted RBP12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 HERC2P3Q9BVR0 1158 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 COLEC11Q9BWP8 271 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 VN1R3Q9BXE9 311 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 EMILIN2Q9BXX0 1053 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 MRPL4Q9BYD3 311 aaKnown RBP12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 TMEM134Q9H6X4 195 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 MARCH5Q9NX47 278 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 MIOSQ9NXC5 875 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 SNTG2Q9NY99 539 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 KLK14Q9P0G3 267 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 ARHGAP28Q9P2N2 729 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 SSX2IPQ9Y2D8 614 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 USP15Q9Y4E8 981 aaPredicted RBP12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 EPG5Q9HCE0 2579 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 DOCK6Q96HP0 2047 aa12.52□□□□□ -0.41
NUDCD3-206ENST00000475952 CACNA1BQ00975 2339 aa12.51□□□□□ -0.41
NUDCD3-206ENST00000475952 PROB1E7EW31 1015 aa12.51□□□□□ -0.41
NUDCD3-206ENST00000475952 PLS3P13797 630 aa12.51□□□□□ -0.41
NUDCD3-206ENST00000475952 AVPR2P30518 371 aa12.51□□□□□ -0.41
NUDCD3-206ENST00000475952 RAD51AP2Q09MP3 1159 aa12.51□□□□□ -0.41
NUDCD3-206ENST00000475952 STRN3Q13033 797 aa12.51□□□□□ -0.41
NUDCD3-206ENST00000475952 TPRNQ4KMQ1 711 aa12.51□□□□□ -0.41
NUDCD3-206ENST00000475952 EEF1DP3Q658K8 133 aa12.51□□□□□ -0.41
NUDCD3-206ENST00000475952 ASCL5Q7RTU5 278 aa12.51□□□□□ -0.41
NUDCD3-206ENST00000475952 PPFIBP1Q86W92 1011 aa12.51□□□□□ -0.41
NUDCD3-206ENST00000475952 GSTCDQ8NEC7 633 aa12.51□□□□□ -0.41
NUDCD3-206ENST00000475952 SPIRE2Q8WWL2 714 aa12.51□□□□□ -0.41
NUDCD3-206ENST00000475952 SNX21Q969T3 373 aa12.51□□□□□ -0.41
NUDCD3-206ENST00000475952 ZSCAN16Q9H4T2 348 aaPredicted RBP12.51□□□□□ -0.41
NUDCD3-206ENST00000475952 MRPL17Q9NRX2 175 aaKnown RBP12.51□□□□□ -0.41
NUDCD3-206ENST00000475952 FOXD4L1Q9NU39 408 aa12.51□□□□□ -0.41
NUDCD3-206ENST00000475952 DZANK1Q9NVP4 752 aa12.51□□□□□ -0.41
NUDCD3-206ENST00000475952 LARSQ9P2J5 1176 aaKnown RBP12.51□□□□□ -0.41
NUDCD3-206ENST00000475952 ODF2LQ9ULJ1 636 aa12.51□□□□□ -0.41
NUDCD3-206ENST00000475952 TNFSF13BQ9Y275 285 aa12.51□□□□□ -0.41
NUDCD3-206ENST00000475952 USP20Q9Y2K6 914 aa12.51□□□□□ -0.41
NUDCD3-206ENST00000475952 GDAQ9Y2T3 454 aa12.51□□□□□ -0.41
NUDCD3-206ENST00000475952 KMT2BQ9UMN6 2715 aaPredicted RBP12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 SPDYE4A6NLX3 237 aa12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 H0Y858 1186 aa12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 H0YCG3 227 aa12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 SLC16A4O15374 487 aa12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 STX6O43752 255 aa12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 KRT18P05783 430 aaKnown RBP12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 THP07101 528 aa12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 HSP90AA1P07900 732 aaKnown RBP12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 PLCG1P19174 1290 aa12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 TXLNAP40222 546 aa12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 GLUD2P49448 558 aa12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 YARSP54577 528 aaKnown RBP12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 GRIN1Q05586 938 aa12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 TUSC3Q13454 348 aa12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 KARSQ15046 597 aaKnown RBP12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 NT5DC1Q5TFE4 455 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms