RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 RIT2Q99578 217 aa16.22■□□□□ 0.19
CSNK2B-207ENST00000475875 PLA2G2FQ9BZM2 168 aa16.22■□□□□ 0.19
CSNK2B-207ENST00000475875 BRD9Q9H8M2 597 aa16.22■□□□□ 0.19
CSNK2B-207ENST00000475875 SEPT9Q9UHD8 586 aaPredicted RBP16.22■□□□□ 0.19
CSNK2B-207ENST00000475875 MRPS23Q9Y3D9 190 aaKnown RBP16.22■□□□□ 0.19
CSNK2B-207ENST00000475875 PCDHGA5Q9Y5G8 931 aa16.22■□□□□ 0.19
CSNK2B-207ENST00000475875 SLC12A7Q9Y666 1083 aa16.22■□□□□ 0.19
CSNK2B-207ENST00000475875 ZMYM2Q9UBW7 1377 aa16.22■□□□□ 0.19
CSNK2B-207ENST00000475875 ASH1LQ9NR48 2969 aaKnown RBP16.22■□□□□ 0.19
CSNK2B-207ENST00000475875 CNTNAP5Q8WYK1 1306 aa16.21■□□□□ 0.19
CSNK2B-207ENST00000475875 F8W810 466 aa16.21■□□□□ 0.19
CSNK2B-207ENST00000475875 K7ESF4 209 aa16.21■□□□□ 0.19
CSNK2B-207ENST00000475875 TAF4O00268 1085 aa16.21■□□□□ 0.19
CSNK2B-207ENST00000475875 PRC1O43663 620 aa16.21■□□□□ 0.19
CSNK2B-207ENST00000475875 EPN2O95208 641 aa16.21■□□□□ 0.19
CSNK2B-207ENST00000475875 MLH1P40692 756 aa16.21■□□□□ 0.19
CSNK2B-207ENST00000475875 SCNN1GP51170 649 aa16.21■□□□□ 0.19
CSNK2B-207ENST00000475875 SRSF5Q13243 272 aaKnown RBP16.21■□□□□ 0.19
CSNK2B-207ENST00000475875 LRRC32Q14392 662 aa16.21■□□□□ 0.19
CSNK2B-207ENST00000475875 TANGO2Q6ICL3 276 aa16.21■□□□□ 0.19
CSNK2B-207ENST00000475875 WDR5BQ86VZ2 330 aa16.21■□□□□ 0.19
CSNK2B-207ENST00000475875 CLSTN3Q9BQT9 956 aa16.21■□□□□ 0.19
CSNK2B-207ENST00000475875 DNMT3BQ9UBC3 853 aaKnown RBP16.21■□□□□ 0.19
CSNK2B-207ENST00000475875 GIT1Q9Y2X7 761 aa16.21■□□□□ 0.19
CSNK2B-207ENST00000475875 IPPQ9Y573 584 aa16.21■□□□□ 0.19
CSNK2B-207ENST00000475875 AXLP30530 894 aa16.2■□□□□ 0.18
CSNK2B-207ENST00000475875 MCM5P33992 734 aa16.2■□□□□ 0.18
CSNK2B-207ENST00000475875 PTGDRQ13258 359 aa16.2■□□□□ 0.18
CSNK2B-207ENST00000475875 GAS6Q14393 721 aa16.2■□□□□ 0.18
CSNK2B-207ENST00000475875 PRR16Q569H4 304 aa16.2■□□□□ 0.18
CSNK2B-207ENST00000475875 RTP2Q5QGT7 225 aa16.2■□□□□ 0.18
CSNK2B-207ENST00000475875 JAKMIP3Q5VZ66 844 aa16.2■□□□□ 0.18
CSNK2B-207ENST00000475875 PRSS55Q6UWB4 352 aaPredicted RBP16.2■□□□□ 0.18
CSNK2B-207ENST00000475875 MAP4K3Q8IVH8 894 aa16.2■□□□□ 0.18
CSNK2B-207ENST00000475875 KSR1Q8IVT5 923 aa16.2■□□□□ 0.18
CSNK2B-207ENST00000475875 HACE1Q8IYU2 909 aa16.2■□□□□ 0.18
CSNK2B-207ENST00000475875 EXOC6Q8TAG9 804 aa16.2■□□□□ 0.18
CSNK2B-207ENST00000475875 SLC7A14Q8TBB6 771 aa16.2■□□□□ 0.18
CSNK2B-207ENST00000475875 RUFY2Q8WXA3 655 aa16.2■□□□□ 0.18
CSNK2B-207ENST00000475875 GATA6Q92908 595 aa16.2■□□□□ 0.18
CSNK2B-207ENST00000475875 LENG9Q96B70 501 aa16.2■□□□□ 0.18
CSNK2B-207ENST00000475875 TTPALQ9BTX7 342 aa16.2■□□□□ 0.18
CSNK2B-207ENST00000475875 TRMT61BQ9BVS5 477 aaKnown RBP16.2■□□□□ 0.18
CSNK2B-207ENST00000475875 ARRDC1-AS1Q9H2J1 176 aa16.2■□□□□ 0.18
CSNK2B-207ENST00000475875 RBM28Q9NW13 759 aaKnown RBP16.2■□□□□ 0.18
CSNK2B-207ENST00000475875 COL4A3BPQ9Y5P4 624 aa16.2■□□□□ 0.18
CSNK2B-207ENST00000475875 LAMA1P25391 3075 aa16.2■□□□□ 0.18
CSNK2B-207ENST00000475875 WDR81Q562E7 1941 aa16.19■□□□□ 0.18
CSNK2B-207ENST00000475875 TADA2AO75478 443 aa16.19■□□□□ 0.18
CSNK2B-207ENST00000475875 RAP1GAPP47736 663 aa16.19■□□□□ 0.18
CSNK2B-207ENST00000475875 NOVA1P51513 510 aaKnown RBP16.19■□□□□ 0.18
CSNK2B-207ENST00000475875 PTH1RQ03431 593 aa16.19■□□□□ 0.18
CSNK2B-207ENST00000475875 PSMD5Q16401 504 aa16.19■□□□□ 0.18
CSNK2B-207ENST00000475875 PLA2G2CQ5R387 149 aa16.19■□□□□ 0.18
CSNK2B-207ENST00000475875 AXDND1Q5T1B0 1012 aaPredicted RBP16.19■□□□□ 0.18
CSNK2B-207ENST00000475875 SGMS1Q86VZ5 419 aa16.19■□□□□ 0.18
CSNK2B-207ENST00000475875 EXOC8Q8IYI6 725 aa16.19■□□□□ 0.18
CSNK2B-207ENST00000475875 LNX1Q8TBB1 728 aaPredicted RBP16.19■□□□□ 0.18
CSNK2B-207ENST00000475875 MCRS1Q96EZ8 462 aa16.19■□□□□ 0.18
CSNK2B-207ENST00000475875 ZFP14Q9HCL3 533 aa16.19■□□□□ 0.18
CSNK2B-207ENST00000475875 ZNF334Q9HCZ1 680 aaPredicted RBP16.19■□□□□ 0.18
CSNK2B-207ENST00000475875 HCFC1R1Q9NWW0 138 aa16.19■□□□□ 0.18
CSNK2B-207ENST00000475875 MIOSQ9NXC5 875 aa16.19■□□□□ 0.18
CSNK2B-207ENST00000475875 PIAS3Q9Y6X2 628 aa16.19■□□□□ 0.18
CSNK2B-207ENST00000475875 AXIN1O15169 862 aa16.18■□□□□ 0.18
CSNK2B-207ENST00000475875 GAS7O60861 476 aa16.18■□□□□ 0.18
CSNK2B-207ENST00000475875 MICAL2O94851 1124 aa16.18■□□□□ 0.18
CSNK2B-207ENST00000475875 STBD1O95210 358 aa16.18■□□□□ 0.18
CSNK2B-207ENST00000475875 FCARP24071 287 aa16.18■□□□□ 0.18
CSNK2B-207ENST00000475875 ZNF252P-AS1Q0IIN9 211 aa16.18■□□□□ 0.18
CSNK2B-207ENST00000475875 FOXC1Q12948 553 aa16.18■□□□□ 0.18
CSNK2B-207ENST00000475875 GRIK3Q13003 919 aa16.18■□□□□ 0.18
CSNK2B-207ENST00000475875 RAB33AQ14088 237 aa16.18■□□□□ 0.18
CSNK2B-207ENST00000475875 RNF43Q68DV7 783 aa16.18■□□□□ 0.18
CSNK2B-207ENST00000475875 CACNA2D4Q7Z3S7 1137 aa16.18■□□□□ 0.18
CSNK2B-207ENST00000475875 CHD1LQ86WJ1 897 aa16.18■□□□□ 0.18
CSNK2B-207ENST00000475875 SMC5Q8IY18 1101 aa16.18■□□□□ 0.18
CSNK2B-207ENST00000475875 DEPDC1BQ8WUY9 529 aa16.18■□□□□ 0.18
CSNK2B-207ENST00000475875 ING5Q8WYH8 240 aa16.18■□□□□ 0.18
CSNK2B-207ENST00000475875 ZFP42Q96MM3 310 aa16.18■□□□□ 0.18
CSNK2B-207ENST00000475875 RNF39Q9H2S5 420 aa16.18■□□□□ 0.18
CSNK2B-207ENST00000475875 VPS45Q9NRW7 570 aa16.18■□□□□ 0.18
CSNK2B-207ENST00000475875 PPME1Q9Y570 386 aa16.18■□□□□ 0.18
CSNK2B-207ENST00000475875 ITPR1Q14643 2758 aa16.18■□□□□ 0.18
CSNK2B-207ENST00000475875 NOTCH4Q99466 2003 aa16.18■□□□□ 0.18
CSNK2B-207ENST00000475875 CCDC163A0A0D9SF12 145 aa16.17■□□□□ 0.18
CSNK2B-207ENST00000475875 ESYT2A0FGR8 921 aa16.17■□□□□ 0.18
CSNK2B-207ENST00000475875 RHOP08100 348 aa16.17■□□□□ 0.18
CSNK2B-207ENST00000475875 PSMC3P17980 439 aa16.17■□□□□ 0.18
CSNK2B-207ENST00000475875 FUT2Q10981 343 aa16.17■□□□□ 0.18
CSNK2B-207ENST00000475875 ELAVL2Q12926 359 aaKnown RBP16.17■□□□□ 0.18
CSNK2B-207ENST00000475875 HSP90AA2PQ14568 343 aaPredicted RBP16.17■□□□□ 0.18
CSNK2B-207ENST00000475875 NOTUMQ6P988 496 aa16.17■□□□□ 0.18
CSNK2B-207ENST00000475875 MICU3Q86XE3 530 aa16.17■□□□□ 0.18
CSNK2B-207ENST00000475875 GSTCDQ8NEC7 633 aa16.17■□□□□ 0.18
CSNK2B-207ENST00000475875 PSPC1Q8WXF1 523 aaKnown RBP16.17■□□□□ 0.18
CSNK2B-207ENST00000475875 ZCCHC14Q8WYQ9 949 aaKnown RBP16.17■□□□□ 0.18
CSNK2B-207ENST00000475875 TEKT3Q9BXF9 490 aa16.17■□□□□ 0.18
CSNK2B-207ENST00000475875 MINDY3Q9H8M7 445 aa16.17■□□□□ 0.18
CSNK2B-207ENST00000475875 MSH4O15457 936 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms