RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 KIZQ2M2Z5 673 aa14.89□□□□□ -0.03
TRAF4-210ENST00000475329 NBPF20Q3BBV1 942 aa14.89□□□□□ -0.03
TRAF4-210ENST00000475329 ZBTB41Q5SVQ8 909 aa14.89□□□□□ -0.03
TRAF4-210ENST00000475329 TOGARAM2Q6ZUX3 1019 aa14.89□□□□□ -0.03
TRAF4-210ENST00000475329 BRSK2Q8IWQ3 736 aa14.89□□□□□ -0.03
TRAF4-210ENST00000475329 PCSK9Q8NBP7 692 aaKnown RBP14.89□□□□□ -0.03
TRAF4-210ENST00000475329 EHBP1Q8NDI1 1231 aa14.89□□□□□ -0.03
TRAF4-210ENST00000475329 DNAJB3Q8WWF6 145 aa14.89□□□□□ -0.03
TRAF4-210ENST00000475329 SPAG5Q96R06 1193 aa14.89□□□□□ -0.03
TRAF4-210ENST00000475329 CGRRF1Q99675 332 aa14.89□□□□□ -0.03
TRAF4-210ENST00000475329 CDT1Q9H211 546 aa14.89□□□□□ -0.03
TRAF4-210ENST00000475329 TOPORSQ9NS56 1045 aaPredicted RBP14.89□□□□□ -0.03
TRAF4-210ENST00000475329 APEX2Q9UBZ4 518 aa14.89□□□□□ -0.03
TRAF4-210ENST00000475329 GTF2IRD1Q9UHL9 959 aa14.89□□□□□ -0.03
TRAF4-210ENST00000475329 PPP2R2CQ9Y2T4 447 aa14.89□□□□□ -0.03
TRAF4-210ENST00000475329 USP27XA6NNY8 438 aa14.88□□□□□ -0.03
TRAF4-210ENST00000475329 TSPAN1O60635 241 aa14.88□□□□□ -0.03
TRAF4-210ENST00000475329 GPR32O75388 356 aa14.88□□□□□ -0.03
TRAF4-210ENST00000475329 MYCNP04198 464 aaPredicted RBP14.88□□□□□ -0.03
TRAF4-210ENST00000475329 CCDC175P0C221 793 aa14.88□□□□□ -0.03
TRAF4-210ENST00000475329 IQCF3P0C7M6 154 aa14.88□□□□□ -0.03
TRAF4-210ENST00000475329 MCF2P10911 925 aa14.88□□□□□ -0.03
TRAF4-210ENST00000475329 CYLC1P35663 651 aaPredicted RBP14.88□□□□□ -0.03
TRAF4-210ENST00000475329 CTCFP49711 727 aaPredicted RBP14.88□□□□□ -0.03
TRAF4-210ENST00000475329 ZNF200P98182 395 aaPredicted RBP14.88□□□□□ -0.03
TRAF4-210ENST00000475329 TMEM62Q0P6H9 643 aa14.88□□□□□ -0.03
TRAF4-210ENST00000475329 PCBP1Q15365 356 aaKnown RBP eCLIP14.88□□□□□ -0.034e-7■■■■■ 32.7
TRAF4-210ENST00000475329 SURF1Q15526 300 aa14.88□□□□□ -0.03
TRAF4-210ENST00000475329 KCNA10Q16322 511 aa14.88□□□□□ -0.03
TRAF4-210ENST00000475329 ASIC2Q16515 512 aa14.88□□□□□ -0.03
TRAF4-210ENST00000475329 EEF1DP3Q658K8 133 aa14.88□□□□□ -0.03
TRAF4-210ENST00000475329 IQCEQ6IPM2 695 aa14.88□□□□□ -0.03
TRAF4-210ENST00000475329 TAF2Q6P1X5 1199 aa14.88□□□□□ -0.03
TRAF4-210ENST00000475329 RNF180Q86T96 592 aa14.88□□□□□ -0.03
TRAF4-210ENST00000475329 CCDC170Q8IYT3 715 aa14.88□□□□□ -0.03
TRAF4-210ENST00000475329 NME8Q8N427 588 aa14.88□□□□□ -0.03
TRAF4-210ENST00000475329 PPP1R13BQ96KQ4 1090 aa14.88□□□□□ -0.03
TRAF4-210ENST00000475329 POP1Q99575 1024 aaKnown RBP14.88□□□□□ -0.03
TRAF4-210ENST00000475329 CHP1Q99653 195 aa14.88□□□□□ -0.03
TRAF4-210ENST00000475329 PDZD7Q9H5P4 517 aa14.88□□□□□ -0.03
TRAF4-210ENST00000475329 TRMT1Q9NXH9 659 aaKnown RBP14.88□□□□□ -0.03
TRAF4-210ENST00000475329 COQ4Q9Y3A0 265 aa14.88□□□□□ -0.03
TRAF4-210ENST00000475329 TRIP11Q15643 1979 aa14.87□□□□□ -0.03
TRAF4-210ENST00000475329 GOLGA6L9A6NEM1 432 aa14.87□□□□□ -0.03
TRAF4-210ENST00000475329 CSDE1O75534 798 aaKnown RBP14.87□□□□□ -0.03
TRAF4-210ENST00000475329 ASGR1P07306 291 aa14.87□□□□□ -0.03
TRAF4-210ENST00000475329 ARF4P18085 180 aaPredicted RBP14.87□□□□□ -0.03
TRAF4-210ENST00000475329 TNNI1P19237 187 aa14.87□□□□□ -0.03
TRAF4-210ENST00000475329 GRK4P32298 578 aa14.87□□□□□ -0.03
TRAF4-210ENST00000475329 JAM2P57087 298 aa14.87□□□□□ -0.03
TRAF4-210ENST00000475329 KYAT1Q16773 422 aa14.87□□□□□ -0.03
TRAF4-210ENST00000475329 FAM47CQ5HY64 1035 aa14.87□□□□□ -0.03
TRAF4-210ENST00000475329 COL13A1Q5TAT6 717 aaPredicted RBP14.87□□□□□ -0.03
TRAF4-210ENST00000475329 CCSAPQ6IQ19 270 aaPredicted RBP14.87□□□□□ -0.03
TRAF4-210ENST00000475329 APBB1IPQ7Z5R6 666 aaPredicted RBP14.87□□□□□ -0.03
TRAF4-210ENST00000475329 SESTD1Q86VW0 696 aa14.87□□□□□ -0.03
TRAF4-210ENST00000475329 FMNL3Q8IVF7 1028 aa14.87□□□□□ -0.03
TRAF4-210ENST00000475329 FBXL13Q8NEE6 735 aa14.87□□□□□ -0.03
TRAF4-210ENST00000475329 LMO3Q8TAP4 145 aa14.87□□□□□ -0.03
TRAF4-210ENST00000475329 VTI1AQ96AJ9 217 aa14.87□□□□□ -0.03
TRAF4-210ENST00000475329 DESI2Q9BSY9 194 aa14.87□□□□□ -0.03
TRAF4-210ENST00000475329 PDE11AQ9HCR9 933 aa14.87□□□□□ -0.03
TRAF4-210ENST00000475329 HMX1Q9NP08 348 aaPredicted RBP14.87□□□□□ -0.03
TRAF4-210ENST00000475329 AIPL1Q9NZN9 384 aa14.87□□□□□ -0.03
TRAF4-210ENST00000475329 DNAJC12Q9UKB3 198 aa14.87□□□□□ -0.03
TRAF4-210ENST00000475329 CPSF3Q9UKF6 684 aaKnown RBP14.87□□□□□ -0.03
TRAF4-210ENST00000475329 TRIM17Q9Y577 477 aa14.87□□□□□ -0.03
TRAF4-210ENST00000475329 ADGRG1Q9Y653 693 aa14.87□□□□□ -0.03
TRAF4-210ENST00000475329 CABYRO75952 493 aa14.86□□□□□ -0.03
TRAF4-210ENST00000475329 NDUFA10O95299 355 aa14.86□□□□□ -0.03
TRAF4-210ENST00000475329 IPO7O95373 1038 aaKnown RBP14.86□□□□□ -0.03
TRAF4-210ENST00000475329 SERPING1P05155 500 aa14.86□□□□□ -0.03
TRAF4-210ENST00000475329 RPLP2P05387 115 aaKnown RBP14.86□□□□□ -0.03
TRAF4-210ENST00000475329 DARSP14868 501 aaKnown RBP14.86□□□□□ -0.03
TRAF4-210ENST00000475329 TNFSF9P41273 254 aa14.86□□□□□ -0.03
TRAF4-210ENST00000475329 AP3M2P53677 418 aa14.86□□□□□ -0.03
TRAF4-210ENST00000475329 NCBP1Q09161 790 aaKnown RBP14.86□□□□□ -0.03
TRAF4-210ENST00000475329 SLC9C1Q4G0N8 1177 aa14.86□□□□□ -0.03
TRAF4-210ENST00000475329 SEZ6Q53EL9 994 aa14.86□□□□□ -0.03
TRAF4-210ENST00000475329 TDRD12Q587J7 1177 aaKnown RBP14.86□□□□□ -0.03
TRAF4-210ENST00000475329 GJB7Q6PEY0 223 aa14.86□□□□□ -0.03
TRAF4-210ENST00000475329 C15orf39Q6ZRI6 1047 aa14.86□□□□□ -0.03
TRAF4-210ENST00000475329 SV2AQ7L0J3 742 aa14.86□□□□□ -0.03
TRAF4-210ENST00000475329 CATSPER4Q7RTX7 472 aa14.86□□□□□ -0.03
TRAF4-210ENST00000475329 WDR49Q8IV35 697 aa14.86□□□□□ -0.03
TRAF4-210ENST00000475329 THNSL1Q8IYQ7 743 aa14.86□□□□□ -0.03
TRAF4-210ENST00000475329 CPB2Q96IY4 423 aa14.86□□□□□ -0.03
TRAF4-210ENST00000475329 OSMRQ99650 979 aa14.86□□□□□ -0.03
TRAF4-210ENST00000475329 ADPGKQ9BRR6 497 aa14.86□□□□□ -0.03
TRAF4-210ENST00000475329 NHEJ1Q9H9Q4 299 aaPredicted RBP14.86□□□□□ -0.03
TRAF4-210ENST00000475329 AJAP1Q9UKB5 411 aaPredicted RBP14.86□□□□□ -0.03
TRAF4-210ENST00000475329 GINS2Q9Y248 185 aa14.86□□□□□ -0.03
TRAF4-210ENST00000475329 PTCH2Q9Y6C5 1203 aa14.86□□□□□ -0.03
TRAF4-210ENST00000475329 EPN1Q9Y6I3 576 aaPredicted RBP14.86□□□□□ -0.03
TRAF4-210ENST00000475329 SSU72P8A0A1W2PR75 194 aa14.85□□□□□ -0.03
TRAF4-210ENST00000475329 M0QZ92 97 aa14.85□□□□□ -0.03
TRAF4-210ENST00000475329 ZC3H11AO75152 810 aaKnown RBP eCLIP14.85□□□□□ -0.03
TRAF4-210ENST00000475329 IL18RAPO95256 599 aa14.85□□□□□ -0.03
TRAF4-210ENST00000475329 STAT1P42224 750 aa14.85□□□□□ -0.03
TRAF4-210ENST00000475329 PIK3CAP42336 1068 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms