RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 PTGESO14684 152 aa18.52■□□□□ 0.56
SCAF11-206ENST00000474828 B4GALT3O60512 393 aa18.52■□□□□ 0.56
SCAF11-206ENST00000474828 RECQL4O94761 1208 aa18.52■□□□□ 0.56
SCAF11-206ENST00000474828 LAG3P18627 525 aa18.52■□□□□ 0.56
SCAF11-206ENST00000474828 AKAP5P24588 427 aa18.52■□□□□ 0.56
SCAF11-206ENST00000474828 SNRPFP62306 86 aaKnown RBP18.52■□□□□ 0.56
SCAF11-206ENST00000474828 STK4Q13043 487 aa18.52■□□□□ 0.56
SCAF11-206ENST00000474828 PAN2Q504Q3 1202 aaKnown RBP18.52■□□□□ 0.56
SCAF11-206ENST00000474828 CEP120Q8N960 986 aa18.52■□□□□ 0.56
SCAF11-206ENST00000474828 KIAA0895Q8NCT3 520 aa18.52■□□□□ 0.56
SCAF11-206ENST00000474828 ZFP42Q96MM3 310 aa18.52■□□□□ 0.56
SCAF11-206ENST00000474828 GAD1Q99259 594 aa18.52■□□□□ 0.56
SCAF11-206ENST00000474828 LMBRD1Q9NUN5 540 aa18.52■□□□□ 0.56
SCAF11-206ENST00000474828 LMCD1Q9NZU5 365 aa18.52■□□□□ 0.56
SCAF11-206ENST00000474828 HCSTQ9UBK5 93 aa18.52■□□□□ 0.56
SCAF11-206ENST00000474828 COL6A3P12111 3177 aa18.52■□□□□ 0.55
SCAF11-206ENST00000474828 OGTO15294 1046 aa18.51■□□□□ 0.55
SCAF11-206ENST00000474828 TGFB1I1O43294 461 aa18.51■□□□□ 0.55
SCAF11-206ENST00000474828 PRPF40AO75400 957 aaKnown RBP18.51■□□□□ 0.55
SCAF11-206ENST00000474828 EFEMP2O95967 443 aa18.51■□□□□ 0.55
SCAF11-206ENST00000474828 KCNE1P15382 129 aa18.51■□□□□ 0.55
SCAF11-206ENST00000474828 GARTP22102 1010 aa18.51■□□□□ 0.55
SCAF11-206ENST00000474828 MLH1P40692 756 aa18.51■□□□□ 0.55
SCAF11-206ENST00000474828 PLCB3Q01970 1234 aa18.51■□□□□ 0.55
SCAF11-206ENST00000474828 TMEM132AQ24JP5 1023 aa18.51■□□□□ 0.55
SCAF11-206ENST00000474828 COBLL1Q53SF7 1204 aa18.51■□□□□ 0.55
SCAF11-206ENST00000474828 COLGALT1Q8NBJ5 622 aa18.51■□□□□ 0.55
SCAF11-206ENST00000474828 URGCPQ8TCY9 931 aa18.51■□□□□ 0.55
SCAF11-206ENST00000474828 GSDMAQ96QA5 445 aa18.51■□□□□ 0.55
SCAF11-206ENST00000474828 CDX2Q99626 313 aaPredicted RBP18.51■□□□□ 0.55
SCAF11-206ENST00000474828 TMEM175Q9BSA9 504 aa18.51■□□□□ 0.55
SCAF11-206ENST00000474828 TCHPQ9BT92 498 aa18.51■□□□□ 0.55
SCAF11-206ENST00000474828 IKZF4Q9H2S9 585 aa18.51■□□□□ 0.55
SCAF11-206ENST00000474828 NRDE2Q9H7Z3 1164 aa18.51■□□□□ 0.55
SCAF11-206ENST00000474828 PLEKHA5Q9HAU0 1116 aa18.51■□□□□ 0.55
SCAF11-206ENST00000474828 AAASQ9NRG9 546 aa18.51■□□□□ 0.55
SCAF11-206ENST00000474828 CNTN3Q9P232 1028 aa18.51■□□□□ 0.55
SCAF11-206ENST00000474828 NLRC5Q86WI3 1866 aa18.5■□□□□ 0.55
SCAF11-206ENST00000474828 TTC26A0AVF1 554 aa18.5■□□□□ 0.55
SCAF11-206ENST00000474828 TISP43B9A030 160 aa18.5■□□□□ 0.55
SCAF11-206ENST00000474828 DDHD2O94830 711 aa18.5■□□□□ 0.55
SCAF11-206ENST00000474828 PRPF6O94906 941 aaKnown RBP18.5■□□□□ 0.55
SCAF11-206ENST00000474828 CLTAP09496 248 aa18.5■□□□□ 0.55
SCAF11-206ENST00000474828 GRIK3Q13003 919 aa18.5■□□□□ 0.55
SCAF11-206ENST00000474828 ADGRE1Q14246 886 aa18.5■□□□□ 0.55
SCAF11-206ENST00000474828 SLC10A6Q3KNW5 377 aa18.5■□□□□ 0.55
SCAF11-206ENST00000474828 KCNT2Q6UVM3 1135 aa18.5■□□□□ 0.55
SCAF11-206ENST00000474828 ZNF280BQ86YH2 543 aa18.5■□□□□ 0.55
SCAF11-206ENST00000474828 C12orf56Q8IXR9 622 aa18.5■□□□□ 0.55
SCAF11-206ENST00000474828 COLGALT2Q8IYK4 626 aa18.5■□□□□ 0.55
SCAF11-206ENST00000474828 FBXO22Q8NEZ5 403 aa18.5■□□□□ 0.55
SCAF11-206ENST00000474828 ARNTL2Q8WYA1 636 aa18.5■□□□□ 0.55
SCAF11-206ENST00000474828 BICD1Q96G01 975 aa18.5■□□□□ 0.55
SCAF11-206ENST00000474828 SNX27Q96L92 541 aa18.5■□□□□ 0.55
SCAF11-206ENST00000474828 GBP4Q96PP9 640 aa18.5■□□□□ 0.55
SCAF11-206ENST00000474828 PPP1R10Q96QC0 940 aaKnown RBP18.5■□□□□ 0.55
SCAF11-206ENST00000474828 TSPAN18Q96SJ8 248 aa18.5■□□□□ 0.55
SCAF11-206ENST00000474828 C11orf84Q9BUA3 381 aaPredicted RBP18.5■□□□□ 0.55
SCAF11-206ENST00000474828 CCDC94Q9BW85 323 aaPredicted RBP18.5■□□□□ 0.55
SCAF11-206ENST00000474828 LMAN2LQ9H0V9 348 aa18.5■□□□□ 0.55
SCAF11-206ENST00000474828 CXCL16Q9H2A7 254 aa18.5■□□□□ 0.55
SCAF11-206ENST00000474828 TOPORSQ9NS56 1045 aaPredicted RBP18.5■□□□□ 0.55
SCAF11-206ENST00000474828 CGNQ9P2M7 1197 aaKnown RBP18.5■□□□□ 0.55
SCAF11-206ENST00000474828 CPSF3Q9UKF6 684 aaKnown RBP18.5■□□□□ 0.55
SCAF11-206ENST00000474828 PLAGL2Q9UPG8 496 aa18.5■□□□□ 0.55
SCAF11-206ENST00000474828 KIAA0391O15091 583 aaKnown RBP18.49■□□□□ 0.55
SCAF11-206ENST00000474828 KINO60870 393 aaKnown RBP18.49■□□□□ 0.55
SCAF11-206ENST00000474828 GALTP07902 379 aa18.49■□□□□ 0.55
SCAF11-206ENST00000474828 SCNN1GP51170 649 aa18.49■□□□□ 0.55
SCAF11-206ENST00000474828 UBE3AQ05086 875 aa18.49■□□□□ 0.55
SCAF11-206ENST00000474828 PNOCQ13519 176 aa18.49■□□□□ 0.55
SCAF11-206ENST00000474828 CRELD2Q6UXH1 353 aaPredicted RBP18.49■□□□□ 0.55
SCAF11-206ENST00000474828 ZBTB33Q86T24 672 aa18.49■□□□□ 0.55
SCAF11-206ENST00000474828 SLC39A11Q8N1S5 342 aa18.49■□□□□ 0.55
SCAF11-206ENST00000474828 FBXL18Q96ME1 805 aa18.49■□□□□ 0.55
SCAF11-206ENST00000474828 FAM161BQ96MY7 647 aa18.49■□□□□ 0.55
SCAF11-206ENST00000474828 ACAP3Q96P50 834 aa18.49■□□□□ 0.55
SCAF11-206ENST00000474828 PRDM12Q9H4Q4 367 aa18.49■□□□□ 0.55
SCAF11-206ENST00000474828 SLC39A2Q9NP94 309 aa18.49■□□□□ 0.55
SCAF11-206ENST00000474828 EXOC1Q9NV70 894 aa18.49■□□□□ 0.55
SCAF11-206ENST00000474828 ANKFY1Q9P2R3 1169 aa18.49■□□□□ 0.55
SCAF11-206ENST00000474828 PARP2Q9UGN5 583 aa18.49■□□□□ 0.55
SCAF11-206ENST00000474828 LZTS1Q9Y250 596 aa18.49■□□□□ 0.55
SCAF11-206ENST00000474828 PCDHB12Q9Y5F1 795 aa18.49■□□□□ 0.55
SCAF11-206ENST00000474828 COL4A4P53420 1690 aaPredicted RBP18.48■□□□□ 0.55
SCAF11-206ENST00000474828 IBSPP21815 317 aaPredicted RBP18.48■□□□□ 0.55
SCAF11-206ENST00000474828 CTNNB1P35222 781 aa18.48■□□□□ 0.55
SCAF11-206ENST00000474828 PPM1AP35813 382 aa18.48■□□□□ 0.55
SCAF11-206ENST00000474828 BCAR1P56945 870 aa18.48■□□□□ 0.55
SCAF11-206ENST00000474828 CAMK1Q14012 370 aa18.48■□□□□ 0.55
SCAF11-206ENST00000474828 ZBTB6Q15916 424 aa18.48■□□□□ 0.55
SCAF11-206ENST00000474828 KNOP1Q1ED39 458 aaKnown RBP18.48■□□□□ 0.55
SCAF11-206ENST00000474828 THNSL1Q8IYQ7 743 aa18.48■□□□□ 0.55
SCAF11-206ENST00000474828 KLHL23Q8NBE8 558 aa18.48■□□□□ 0.55
SCAF11-206ENST00000474828 SPPL3Q8TCT6 385 aa18.48■□□□□ 0.55
SCAF11-206ENST00000474828 ZNF558Q96NG5 402 aa18.48■□□□□ 0.55
SCAF11-206ENST00000474828 MSTO1Q9BUK6 570 aa18.48■□□□□ 0.55
SCAF11-206ENST00000474828 APOL6Q9BWW8 343 aa18.48■□□□□ 0.55
SCAF11-206ENST00000474828 GTPBP4Q9BZE4 634 aaKnown RBP18.48■□□□□ 0.55
SCAF11-206ENST00000474828 GBP3Q9H0R5 595 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms