RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 APBB2Q92870 758 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 NKD2Q969F2 451 aaPredicted RBP7.68□□□□□ -1.18
LIMD1-204ENST00000474665 SLC9A7Q96T83 725 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 ACO2Q99798 780 aaKnown RBP7.68□□□□□ -1.18
LIMD1-204ENST00000474665 TRAIPQ9BWF2 469 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 EIF2AQ9BY44 585 aaKnown RBP7.68□□□□□ -1.18
LIMD1-204ENST00000474665 C2orf40Q9H1Z8 148 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 CXCL16Q9H2A7 254 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 RNF39Q9H2S5 420 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 PDZD7Q9H5P4 517 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 RC3H2Q9HBD1 1191 aaKnown RBP7.68□□□□□ -1.18
LIMD1-204ENST00000474665 RGS18Q9NS28 235 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 LARSQ9P2J5 1176 aaKnown RBP7.68□□□□□ -1.18
LIMD1-204ENST00000474665 SEL1LQ9UBV2 794 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 TBX20Q9UMR3 447 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 PIN4Q9Y237 131 aaKnown RBP7.68□□□□□ -1.18
LIMD1-204ENST00000474665 FAM50BQ9Y247 325 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 PCDHA5Q9Y5H7 936 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 ZMYM2Q9UBW7 1377 aa7.68□□□□□ -1.18
LIMD1-204ENST00000474665 CFAP47Q6ZTR5 3102 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 PDCD11Q14690 1871 aaKnown RBP7.67□□□□□ -1.18
LIMD1-204ENST00000474665 A0A0U1RQF3 1178 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 ANKRD63C9JTQ0 380 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 K7ENM7 598 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 TGFB1I1O43294 461 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 FAM189A1O60320 539 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 ZNF623O75123 536 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 BAIAP3O94812 1187 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 PRPF6O94906 941 aaKnown RBP7.67□□□□□ -1.18
LIMD1-204ENST00000474665 RHOBTB3O94955 611 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 PIGRP01833 764 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 MYL1P05976 194 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 GATMP50440 423 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 AFF1P51825 1210 aaKnown RBP7.67□□□□□ -1.18
LIMD1-204ENST00000474665 SMTNP53814 917 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 PRPF4BQ13523 1007 aaKnown RBP7.67□□□□□ -1.18
LIMD1-204ENST00000474665 PCBP1Q15365 356 aaKnown RBP eCLIP7.67□□□□□ -1.18
LIMD1-204ENST00000474665 CLUL1Q15846 466 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 CAMK4Q16566 473 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 MAPK6Q16659 721 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 FAM26FQ5R3K3 315 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 SLC24A5Q71RS6 500 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 MRPL10Q7Z7H8 261 aaKnown RBP7.67□□□□□ -1.18
LIMD1-204ENST00000474665 ECHDC2Q86YB7 292 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 MAP4K3Q8IVH8 894 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 ZBTB8OSQ8IWT0 167 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 CCDC65Q8IXS2 484 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 CEP120Q8N960 986 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 ZSWIM2Q8NEG5 633 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 PHOSPHO2Q8TCD6 241 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 LPPQ93052 612 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 TOP1MTQ969P6 601 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 PRIMPOLQ96LW4 560 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 FTHL17Q9BXU8 183 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 LRRC27Q9C0I9 530 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 CLSTN2Q9H4D0 955 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 MRPL44Q9H9J2 332 aaKnown RBP7.67□□□□□ -1.18
LIMD1-204ENST00000474665 SLC39A2Q9NP94 309 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 CHST12Q9NRB3 414 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 PRMT7Q9NVM4 692 aaPredicted RBP7.67□□□□□ -1.18
LIMD1-204ENST00000474665 GDAQ9Y2T3 454 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 HES2Q9Y543 173 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 PCDHB2Q9Y5E7 798 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 PHLPP2Q6ZVD8 1323 aa7.67□□□□□ -1.18
LIMD1-204ENST00000474665 KIAA1671Q9BY89 1806 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 TDRD15B5MCY1 1934 aaKnown RBP7.66□□□□□ -1.18
LIMD1-204ENST00000474665 ACACBO00763 2458 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 GALR2O43603 387 aaPredicted RBP7.66□□□□□ -1.18
LIMD1-204ENST00000474665 B4GALT3O60512 393 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 KINO60870 393 aaKnown RBP7.66□□□□□ -1.18
LIMD1-204ENST00000474665 ERLIN2O94905 339 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 GJB5O95377 273 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 GCNT3O95395 438 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 LINC00271P0C7V0 271 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 ACTN1P12814 892 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 AXLP30530 894 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 KCNB1Q14721 858 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 BMT2Q1RMZ1 405 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 CLLU1OSQ5K130 101 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 ZBTB41Q5SVQ8 909 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 L1TD1Q5T7N2 865 aaKnown RBP7.66□□□□□ -1.18
LIMD1-204ENST00000474665 ATF7IP2Q5U623 682 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 TWF2Q6IBS0 349 aaKnown RBP7.66□□□□□ -1.18
LIMD1-204ENST00000474665 KANK3Q6NY19 840 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 FAM117BQ6P1L5 589 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 NOTUMQ6P988 496 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 ZPBP2Q6X784 338 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 AGMOQ6ZNB7 445 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 TMEM192Q8IY95 271 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 SMYD4Q8IYR2 804 aaPredicted RBP7.66□□□□□ -1.18
LIMD1-204ENST00000474665 MYOCDQ8IZQ8 938 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 GSTCDQ8NEC7 633 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 ZNF507Q8TCN5 953 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 MRPL4Q9BYD3 311 aaKnown RBP7.66□□□□□ -1.18
LIMD1-204ENST00000474665 CDT1Q9H211 546 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 NXF3Q9H4D5 531 aaKnown RBP7.66□□□□□ -1.18
LIMD1-204ENST00000474665 FAM105AQ9NUU6 356 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 HCSTQ9UBK5 93 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 MAN1B1Q9UKM7 699 aa7.66□□□□□ -1.18
LIMD1-204ENST00000474665 TNFSF13BQ9Y275 285 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms