RNA–Protein interactions for RNA: ENST00000474642.1

RTN4R-206, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-206ENST00000474642 GDF9O60383 454 aa14.79□□□□□ -0.04
RTN4R-206ENST00000474642 ECI2O75521 394 aa14.79□□□□□ -0.04
RTN4R-206ENST00000474642 SF3B1O75533 1304 aaKnown RBP eCLIP14.79□□□□□ -0.043e-6■■■■■ 137.9
RTN4R-206ENST00000474642 AXLP30530 894 aa14.79□□□□□ -0.04
RTN4R-206ENST00000474642 NPEPPSP55786 919 aa14.79□□□□□ -0.04
RTN4R-206ENST00000474642 PSMC5P62195 406 aa14.79□□□□□ -0.04
RTN4R-206ENST00000474642 SIM2Q14190 667 aaPredicted RBP14.79□□□□□ -0.04
RTN4R-206ENST00000474642 CSRP2Q16527 193 aa14.79□□□□□ -0.04
RTN4R-206ENST00000474642 PABPC1LQ4VXU2 614 aaKnown RBP14.79□□□□□ -0.04
RTN4R-206ENST00000474642 RTP2Q5QGT7 225 aa14.79□□□□□ -0.04
RTN4R-206ENST00000474642 CEP57Q86XR8 500 aa14.79□□□□□ -0.04
RTN4R-206ENST00000474642 NPAS3Q8IXF0 933 aa14.79□□□□□ -0.04
RTN4R-206ENST00000474642 RNF149Q8NC42 400 aa14.79□□□□□ -0.04
RTN4R-206ENST00000474642 CPB2Q96IY4 423 aa14.79□□□□□ -0.04
RTN4R-206ENST00000474642 TTPALQ9BTX7 342 aa14.79□□□□□ -0.04
RTN4R-206ENST00000474642 TRIM6Q9C030 488 aaPredicted RBP14.79□□□□□ -0.04
RTN4R-206ENST00000474642 CHRDQ9H2X0 955 aa14.79□□□□□ -0.04
RTN4R-206ENST00000474642 KCNH3Q9ULD8 1083 aa14.79□□□□□ -0.04
RTN4R-206ENST00000474642 GIT1Q9Y2X7 761 aa14.79□□□□□ -0.04
RTN4R-206ENST00000474642 CCDC196A0A1B0GTZ2 297 aa14.78□□□□□ -0.04
RTN4R-206ENST00000474642 MAN2B1O00754 1011 aa14.78□□□□□ -0.04
RTN4R-206ENST00000474642 EDIL3O43854 480 aa14.78□□□□□ -0.04
RTN4R-206ENST00000474642 FOXD2O60548 495 aaPredicted RBP14.78□□□□□ -0.04
RTN4R-206ENST00000474642 TDGF1P13385 188 aa14.78□□□□□ -0.04
RTN4R-206ENST00000474642 ADD1P35611 737 aaKnown RBP14.78□□□□□ -0.04
RTN4R-206ENST00000474642 CCR3P51677 355 aa14.78□□□□□ -0.04
RTN4R-206ENST00000474642 NECTIN1Q15223 517 aa14.78□□□□□ -0.04
RTN4R-206ENST00000474642 PSMD5Q16401 504 aa14.78□□□□□ -0.04
RTN4R-206ENST00000474642 MAMSTRQ6ZN01 415 aa14.78□□□□□ -0.04
RTN4R-206ENST00000474642 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.78□□□□□ -0.04
RTN4R-206ENST00000474642 SLC7A14Q8TBB6 771 aa14.78□□□□□ -0.04
RTN4R-206ENST00000474642 CCDC51Q96ER9 411 aa14.78□□□□□ -0.04
RTN4R-206ENST00000474642 MCRS1Q96EZ8 462 aa14.78□□□□□ -0.04
RTN4R-206ENST00000474642 CEP170P1Q96L14 293 aa14.78□□□□□ -0.04
RTN4R-206ENST00000474642 CLSTN3Q9BQT9 956 aa14.78□□□□□ -0.04
RTN4R-206ENST00000474642 IER2Q9BTL4 223 aa14.78□□□□□ -0.04
RTN4R-206ENST00000474642 PLA2G2FQ9BZM2 168 aa14.78□□□□□ -0.04
RTN4R-206ENST00000474642 CSRNP2Q9H175 543 aa14.78□□□□□ -0.04
RTN4R-206ENST00000474642 HCFC1R1Q9NWW0 138 aa14.78□□□□□ -0.04
RTN4R-206ENST00000474642 DNMT3BQ9UBC3 853 aaKnown RBP14.78□□□□□ -0.04
RTN4R-206ENST00000474642 MRPS23Q9Y3D9 190 aaKnown RBP14.78□□□□□ -0.04
RTN4R-206ENST00000474642 FASNP49327 2511 aaKnown RBP14.78□□□□□ -0.04
RTN4R-206ENST00000474642 NOTCH4Q99466 2003 aa14.77□□□□□ -0.04
RTN4R-206ENST00000474642 ASAP2O43150 1006 aa14.77□□□□□ -0.05
RTN4R-206ENST00000474642 PMLP29590 882 aa14.77□□□□□ -0.05
RTN4R-206ENST00000474642 EXOSC10Q01780 885 aaKnown RBP14.77□□□□□ -0.05
RTN4R-206ENST00000474642 AKAP17AQ02040 695 aaKnown RBP14.77□□□□□ -0.05
RTN4R-206ENST00000474642 GRIK3Q13003 919 aa14.77□□□□□ -0.05
RTN4R-206ENST00000474642 HSP90AA2PQ14568 343 aaPredicted RBP14.77□□□□□ -0.05
RTN4R-206ENST00000474642 UVSSAQ2YD98 709 aa14.77□□□□□ -0.05
RTN4R-206ENST00000474642 Q4G0T1 1027 aa14.77□□□□□ -0.05
RTN4R-206ENST00000474642 AXDND1Q5T1B0 1012 aaPredicted RBP14.77□□□□□ -0.05
RTN4R-206ENST00000474642 N4BP2L1Q5TBK1 243 aaPredicted RBP14.77□□□□□ -0.05
RTN4R-206ENST00000474642 FAM171A1Q5VUB5 890 aa14.77□□□□□ -0.05
RTN4R-206ENST00000474642 CCDC148Q8NFR7 591 aa14.77□□□□□ -0.05
RTN4R-206ENST00000474642 HASPINQ8TF76 798 aa14.77□□□□□ -0.05
RTN4R-206ENST00000474642 TCP11Q8WWU5 503 aa14.77□□□□□ -0.05
RTN4R-206ENST00000474642 PIK3R5Q8WYR1 880 aa14.77□□□□□ -0.05
RTN4R-206ENST00000474642 DNASE1L2Q92874 299 aa14.77□□□□□ -0.05
RTN4R-206ENST00000474642 NXF3Q9H4D5 531 aaKnown RBP14.77□□□□□ -0.05
RTN4R-206ENST00000474642 BRD9Q9H8M2 597 aa14.77□□□□□ -0.05
RTN4R-206ENST00000474642 LMAN1LQ9HAT1 526 aa14.77□□□□□ -0.05
RTN4R-206ENST00000474642 BMP2KQ9NSY1 1161 aaPredicted RBP14.77□□□□□ -0.05
RTN4R-206ENST00000474642 SHISA7A6NL88 538 aa14.76□□□□□ -0.05
RTN4R-206ENST00000474642 TSPAN1O60635 241 aa14.76□□□□□ -0.05
RTN4R-206ENST00000474642 DKC1O60832 514 aaKnown RBP eCLIP14.76□□□□□ -0.05
RTN4R-206ENST00000474642 POU2F2P09086 479 aa14.76□□□□□ -0.05
RTN4R-206ENST00000474642 AKAP5P24588 427 aa14.76□□□□□ -0.05
RTN4R-206ENST00000474642 RFC5P40937 340 aa14.76□□□□□ -0.05
RTN4R-206ENST00000474642 CXCL12P48061 93 aa14.76□□□□□ -0.05
RTN4R-206ENST00000474642 RCAN1P53805 252 aa14.76□□□□□ -0.05
RTN4R-206ENST00000474642 SHC2P98077 582 aa14.76□□□□□ -0.05
RTN4R-206ENST00000474642 PCBP1Q15365 356 aaKnown RBP eCLIP14.76□□□□□ -0.05
RTN4R-206ENST00000474642 RNF20Q5VTR2 975 aa14.76□□□□□ -0.05
RTN4R-206ENST00000474642 TANGO2Q6ICL3 276 aa14.76□□□□□ -0.05
RTN4R-206ENST00000474642 B3GNT9Q6UX72 402 aa14.76□□□□□ -0.05
RTN4R-206ENST00000474642 DHX32Q7L7V1 743 aaKnown RBP14.76□□□□□ -0.05
RTN4R-206ENST00000474642 FERMT3Q86UX7 667 aa14.76□□□□□ -0.05
RTN4R-206ENST00000474642 ZNF579Q8NAF0 562 aaKnown RBP14.76□□□□□ -0.05
RTN4R-206ENST00000474642 LNX1Q8TBB1 728 aaPredicted RBP14.76□□□□□ -0.05
RTN4R-206ENST00000474642 TBCKQ8TEA7 893 aa14.76□□□□□ -0.05
RTN4R-206ENST00000474642 DHX33Q9H6R0 707 aaKnown RBP14.76□□□□□ -0.05
RTN4R-206ENST00000474642 GDE1Q9NZC3 331 aa14.76□□□□□ -0.05
RTN4R-206ENST00000474642 KLK14Q9P0G3 267 aa14.76□□□□□ -0.05
RTN4R-206ENST00000474642 CACNG4Q9UBN1 327 aa14.76□□□□□ -0.05
RTN4R-206ENST00000474642 PARP2Q9UGN5 583 aa14.76□□□□□ -0.05
RTN4R-206ENST00000474642 PPME1Q9Y570 386 aa14.76□□□□□ -0.05
RTN4R-206ENST00000474642 INO80B-WBP1J3KQ70 363 aa14.75□□□□□ -0.05
RTN4R-206ENST00000474642 ADAM12O43184 909 aa14.75□□□□□ -0.05
RTN4R-206ENST00000474642 PRPF3O43395 683 aaKnown RBP14.75□□□□□ -0.05
RTN4R-206ENST00000474642 HRO43593 1189 aa14.75□□□□□ -0.05
RTN4R-206ENST00000474642 QARSP47897 775 aaKnown RBP14.75□□□□□ -0.05
RTN4R-206ENST00000474642 FGD1P98174 961 aa14.75□□□□□ -0.05
RTN4R-206ENST00000474642 AASDHQ4L235 1098 aaPredicted RBP14.75□□□□□ -0.05
RTN4R-206ENST00000474642 PDXDC1Q6P996 788 aa14.75□□□□□ -0.05
RTN4R-206ENST00000474642 ZNF687Q8N1G0 1237 aa14.75□□□□□ -0.05
RTN4R-206ENST00000474642 GSTCDQ8NEC7 633 aa14.75□□□□□ -0.05
RTN4R-206ENST00000474642 FAM3CQ92520 227 aa14.75□□□□□ -0.05
RTN4R-206ENST00000474642 ELSPBP1Q96BH3 223 aa14.75□□□□□ -0.05
RTN4R-206ENST00000474642 ANO2Q9NQ90 1003 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms