RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 MAPK6Q16659 721 aa23.46■■□□□ 1.35
CCM2-206ENST00000474617 FBXO16Q8IX29 292 aaPredicted RBP23.46■■□□□ 1.35
CCM2-206ENST00000474617 ZSWIM2Q8NEG5 633 aa23.46■■□□□ 1.35
CCM2-206ENST00000474617 CGRRF1Q99675 332 aa23.46■■□□□ 1.35
CCM2-206ENST00000474617 CCDC113Q9H0I3 377 aa23.46■■□□□ 1.35
CCM2-206ENST00000474617 CLDN3O15551 220 aa23.45■■□□□ 1.34
CCM2-206ENST00000474617 KIF4AO95239 1232 aa23.45■■□□□ 1.34
CCM2-206ENST00000474617 RHOXF2BP0C7M4 288 aa23.45■■□□□ 1.34
CCM2-206ENST00000474617 DLATP10515 647 aaKnown RBP23.45■■□□□ 1.34
CCM2-206ENST00000474617 TBXAS1P24557 533 aaPredicted RBP23.45■■□□□ 1.34
CCM2-206ENST00000474617 LAMTOR4Q0VGL1 99 aa23.45■■□□□ 1.34
CCM2-206ENST00000474617 HDXQ7Z353 690 aa23.45■■□□□ 1.34
CCM2-206ENST00000474617 PPTC7Q8NI37 304 aa23.45■■□□□ 1.34
CCM2-206ENST00000474617 TAS1R2Q8TE23 839 aa23.45■■□□□ 1.34
CCM2-206ENST00000474617 EPS8L1Q8TE68 723 aa23.45■■□□□ 1.34
CCM2-206ENST00000474617 COG1Q8WTW3 980 aa23.45■■□□□ 1.34
CCM2-206ENST00000474617 RHOXF2Q9BQY4 288 aa23.45■■□□□ 1.34
CCM2-206ENST00000474617 BTBD19C9JJ37 291 aa23.44■■□□□ 1.34
CCM2-206ENST00000474617 ZNF185O15231 689 aa23.44■■□□□ 1.34
CCM2-206ENST00000474617 MTA2O94776 668 aa23.44■■□□□ 1.34
CCM2-206ENST00000474617 ADORA2AP29274 412 aa23.44■■□□□ 1.34
CCM2-206ENST00000474617 MAPK4P31152 587 aa23.44■■□□□ 1.34
CCM2-206ENST00000474617 GPS2Q13227 327 aa23.44■■□□□ 1.34
CCM2-206ENST00000474617 LONRF2Q1L5Z9 754 aa23.44■■□□□ 1.34
CCM2-206ENST00000474617 FAM110CQ1W6H9 321 aa23.44■■□□□ 1.34
CCM2-206ENST00000474617 PEX26Q7Z412 305 aa23.44■■□□□ 1.34
CCM2-206ENST00000474617 ACTRT1Q8TDG2 376 aa23.44■■□□□ 1.34
CCM2-206ENST00000474617 SEMA4DQ92854 862 aa23.44■■□□□ 1.34
CCM2-206ENST00000474617 KREMEN1Q96MU8 473 aa23.44■■□□□ 1.34
CCM2-206ENST00000474617 ACBD3Q9H3P7 528 aa23.44■■□□□ 1.34
CCM2-206ENST00000474617 EFCC1Q9HA90 598 aa23.44■■□□□ 1.34
CCM2-206ENST00000474617 ZCCHC17Q9NP64 241 aaKnown RBP23.44■■□□□ 1.34
CCM2-206ENST00000474617 NOCTQ9UK39 431 aaKnown RBP23.44■■□□□ 1.34
CCM2-206ENST00000474617 PDE2AO00408 941 aaPredicted RBP23.43■■□□□ 1.34
CCM2-206ENST00000474617 C4BPAP04003 597 aaKnown RBP23.43■■□□□ 1.34
CCM2-206ENST00000474617 CYP2C8P10632 490 aa23.43■■□□□ 1.34
CCM2-206ENST00000474617 TNNI1P19237 187 aa23.43■■□□□ 1.34
CCM2-206ENST00000474617 GPC5P78333 572 aa23.43■■□□□ 1.34
CCM2-206ENST00000474617 CDR2Q01850 454 aa23.43■■□□□ 1.34
CCM2-206ENST00000474617 C11orf63Q6NUN7 778 aa23.43■■□□□ 1.34
CCM2-206ENST00000474617 BRSK2Q8IWQ3 736 aa23.43■■□□□ 1.34
CCM2-206ENST00000474617 PNKPQ96T60 521 aa23.43■■□□□ 1.34
CCM2-206ENST00000474617 TARS2Q9BW92 718 aaKnown RBP23.43■■□□□ 1.34
CCM2-206ENST00000474617 AMFRQ9UKV5 643 aa23.43■■□□□ 1.34
CCM2-206ENST00000474617 TRPC6Q9Y210 931 aa23.43■■□□□ 1.34
CCM2-206ENST00000474617 PLXNB2O15031 1838 aa23.43■■□□□ 1.34
CCM2-206ENST00000474617 ZBTB42B2RXF5 422 aa23.43■■□□□ 1.34
CCM2-206ENST00000474617 MSCO60682 206 aa23.43■■□□□ 1.34
CCM2-206ENST00000474617 MATR3P43243 847 aaKnown RBP eCLIP23.43■■□□□ 1.34
CCM2-206ENST00000474617 MCL1Q07820 350 aa23.43■■□□□ 1.34
CCM2-206ENST00000474617 ARHGAP1Q07960 439 aa23.43■■□□□ 1.34
CCM2-206ENST00000474617 KYAT1Q16773 422 aa23.43■■□□□ 1.34
CCM2-206ENST00000474617 BEND6Q5SZJ8 279 aaPredicted RBP23.43■■□□□ 1.34
CCM2-206ENST00000474617 WDR49Q8IV35 697 aa23.43■■□□□ 1.34
CCM2-206ENST00000474617 TRIM11Q96F44 468 aa23.43■■□□□ 1.34
CCM2-206ENST00000474617 SEPT11Q9NVA2 429 aaKnown RBP23.43■■□□□ 1.34
CCM2-206ENST00000474617 ZNF236Q9UL36 1845 aa23.42■■□□□ 1.34
CCM2-206ENST00000474617 OGTO15294 1046 aa23.42■■□□□ 1.34
CCM2-206ENST00000474617 FTCDO95954 541 aa23.42■■□□□ 1.34
CCM2-206ENST00000474617 TNFRSF8P28908 595 aa23.42■■□□□ 1.34
CCM2-206ENST00000474617 NLRP11P59045 1033 aaKnown RBP23.42■■□□□ 1.34
CCM2-206ENST00000474617 TNNC1P63316 161 aa23.42■■□□□ 1.34
CCM2-206ENST00000474617 FAM193AP78312 1265 aa23.42■■□□□ 1.34
CCM2-206ENST00000474617 GRB14Q14449 540 aa23.42■■□□□ 1.34
CCM2-206ENST00000474617 PPP2R5EQ16537 467 aa23.42■■□□□ 1.34
CCM2-206ENST00000474617 SPRYD7Q5W111 196 aa23.42■■□□□ 1.34
CCM2-206ENST00000474617 CRELD2Q6UXH1 353 aaPredicted RBP23.42■■□□□ 1.34
CCM2-206ENST00000474617 DAAM2Q86T65 1068 aa23.42■■□□□ 1.34
CCM2-206ENST00000474617 RPUSD2Q8IZ73 545 aaKnown RBP23.42■■□□□ 1.34
CCM2-206ENST00000474617 SLC35G2Q8TBE7 412 aa23.42■■□□□ 1.34
CCM2-206ENST00000474617 BRI3BPQ8WY22 251 aa23.42■■□□□ 1.34
CCM2-206ENST00000474617 NAP1L3Q99457 506 aaPredicted RBP23.42■■□□□ 1.34
CCM2-206ENST00000474617 IMPG2Q9BZV3 1241 aa23.42■■□□□ 1.34
CCM2-206ENST00000474617 ABCB6Q9NP58 842 aa23.42■■□□□ 1.34
CCM2-206ENST00000474617 TTC7AQ9ULT0 858 aaPredicted RBP23.42■■□□□ 1.34
CCM2-206ENST00000474617 STXBP5LQ9Y2K9 1186 aa23.42■■□□□ 1.34
CCM2-206ENST00000474617 PLXNA1Q9UIW2 1896 aa23.42■■□□□ 1.34
CCM2-206ENST00000474617 MIF4GDA9UHW6 222 aaKnown RBP23.41■■□□□ 1.34
CCM2-206ENST00000474617 ACKR2O00590 384 aa23.41■■□□□ 1.34
CCM2-206ENST00000474617 NCK2O43639 380 aa23.41■■□□□ 1.34
CCM2-206ENST00000474617 PPFIA4O75335 1185 aa23.41■■□□□ 1.34
CCM2-206ENST00000474617 CLSTN1O94985 981 aa23.41■■□□□ 1.34
CCM2-206ENST00000474617 TBC1D8O95759 1140 aa23.41■■□□□ 1.34
CCM2-206ENST00000474617 PRKCBP05771 671 aa23.41■■□□□ 1.34
CCM2-206ENST00000474617 CYP11B1P15538 503 aa23.41■■□□□ 1.34
CCM2-206ENST00000474617 USP8P40818 1118 aa23.41■■□□□ 1.34
CCM2-206ENST00000474617 PIK3CAP42336 1068 aa23.41■■□□□ 1.34
CCM2-206ENST00000474617 VSNL1P62760 191 aa23.41■■□□□ 1.34
CCM2-206ENST00000474617 MAP1SQ66K74 1059 aaPredicted RBP23.41■■□□□ 1.34
CCM2-206ENST00000474617 TAPT1Q6NXT6 567 aa23.41■■□□□ 1.34
CCM2-206ENST00000474617 TRIM72Q6ZMU5 477 aa23.41■■□□□ 1.34
CCM2-206ENST00000474617 TSHZ1Q6ZSZ6 1077 aa23.41■■□□□ 1.34
CCM2-206ENST00000474617 IFNLR1Q8IU57 520 aaPredicted RBP23.41■■□□□ 1.34
CCM2-206ENST00000474617 HES6Q96HZ4 224 aa23.41■■□□□ 1.34
CCM2-206ENST00000474617 FAXDC2Q96IV6 333 aa23.41■■□□□ 1.34
CCM2-206ENST00000474617 ACO2Q99798 780 aaKnown RBP23.41■■□□□ 1.34
CCM2-206ENST00000474617 EPC1Q9H2F5 836 aa23.41■■□□□ 1.34
CCM2-206ENST00000474617 ZNF408Q9H9D4 720 aa23.41■■□□□ 1.34
CCM2-206ENST00000474617 UVRAGQ9P2Y5 699 aa23.41■■□□□ 1.34
CCM2-206ENST00000474617 PCDHB2Q9Y5E7 798 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms