RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 BRWD1Q9NSI6 2320 aa17.56■□□□□ 0.4
ITGB1-210ENST00000474568 C2orf71A6NGG8 1288 aa17.56■□□□□ 0.4
ITGB1-210ENST00000474568 CASTOR2A6NHX0 329 aa17.56■□□□□ 0.4
ITGB1-210ENST00000474568 PTGESO14684 152 aa17.56■□□□□ 0.4
ITGB1-210ENST00000474568 STAT6P42226 847 aa17.56■□□□□ 0.4
ITGB1-210ENST00000474568 MATR3P43243 847 aaKnown RBP eCLIP17.56■□□□□ 0.41e-6■■■■□ 21.4
ITGB1-210ENST00000474568 NCKAP1LP55160 1127 aa17.56■□□□□ 0.4
ITGB1-210ENST00000474568 DNM1Q05193 864 aaKnown RBP17.56■□□□□ 0.4
ITGB1-210ENST00000474568 HAUS6Q7Z4H7 955 aa17.56■□□□□ 0.4
ITGB1-210ENST00000474568 APBB1IPQ7Z5R6 666 aaPredicted RBP17.56■□□□□ 0.4
ITGB1-210ENST00000474568 MRPL43Q8N983 215 aaKnown RBP17.56■□□□□ 0.4
ITGB1-210ENST00000474568 TMEM87AQ8NBN3 555 aa17.56■□□□□ 0.4
ITGB1-210ENST00000474568 BICD1Q96G01 975 aa17.56■□□□□ 0.4
ITGB1-210ENST00000474568 CHAMP1Q96JM3 812 aa17.56■□□□□ 0.4
ITGB1-210ENST00000474568 NTPCRQ9BSD7 190 aaKnown RBP17.56■□□□□ 0.4
ITGB1-210ENST00000474568 PARVGQ9HBI0 331 aa17.56■□□□□ 0.4
ITGB1-210ENST00000474568 STK17AQ9UEE5 414 aa17.56■□□□□ 0.4
ITGB1-210ENST00000474568 MYMKA6NI61 221 aa17.55■□□□□ 0.4
ITGB1-210ENST00000474568 C2CD2LO14523 706 aa17.55■□□□□ 0.4
ITGB1-210ENST00000474568 TRAK2O60296 914 aa17.55■□□□□ 0.4
ITGB1-210ENST00000474568 NR1I2O75469 434 aa17.55■□□□□ 0.4
ITGB1-210ENST00000474568 YEATS4O95619 227 aa17.55■□□□□ 0.4
ITGB1-210ENST00000474568 NMT1P30419 496 aaKnown RBP17.55■□□□□ 0.4
ITGB1-210ENST00000474568 SEZ6Q53EL9 994 aa17.55■□□□□ 0.4
ITGB1-210ENST00000474568 MPZL3Q6UWV2 235 aa17.55■□□□□ 0.4
ITGB1-210ENST00000474568 CCDC73Q6ZRK6 1079 aa17.55■□□□□ 0.4
ITGB1-210ENST00000474568 SV2BQ7L1I2 683 aa17.55■□□□□ 0.4
ITGB1-210ENST00000474568 TAS1R1Q7RTX1 841 aa17.55■□□□□ 0.4
ITGB1-210ENST00000474568 HASPINQ8TF76 798 aa17.55■□□□□ 0.4
ITGB1-210ENST00000474568 PAAF1Q9BRP4 392 aa17.55■□□□□ 0.4
ITGB1-210ENST00000474568 APOL5Q9BWW9 433 aa17.55■□□□□ 0.4
ITGB1-210ENST00000474568 PTPRHQ9HD43 1115 aa17.55■□□□□ 0.4
ITGB1-210ENST00000474568 CLEC1BQ9P126 229 aa17.55■□□□□ 0.4
ITGB1-210ENST00000474568 KCNG1Q9UIX4 513 aa17.55■□□□□ 0.4
ITGB1-210ENST00000474568 CD207Q9UJ71 328 aa17.55■□□□□ 0.4
ITGB1-210ENST00000474568 MORC2Q9Y6X9 1032 aaPredicted RBP17.55■□□□□ 0.4
ITGB1-210ENST00000474568 CARNS1A5YM72 827 aa17.54■□□□□ 0.4
ITGB1-210ENST00000474568 GRXCR2A6NFK2 248 aa17.54■□□□□ 0.4
ITGB1-210ENST00000474568 ABLIM1O14639 778 aa17.54■□□□□ 0.4
ITGB1-210ENST00000474568 CLASP2O75122 1294 aaKnown RBP17.54■□□□□ 0.4
ITGB1-210ENST00000474568 PPP6R2O75170 966 aa17.54■□□□□ 0.4
ITGB1-210ENST00000474568 THP07101 528 aa17.54■□□□□ 0.4
ITGB1-210ENST00000474568 CTSAP10619 480 aa17.54■□□□□ 0.4
ITGB1-210ENST00000474568 PDIA4P13667 645 aaKnown RBP17.54■□□□□ 0.4
ITGB1-210ENST00000474568 GRM5P41594 1212 aa17.54■□□□□ 0.4
ITGB1-210ENST00000474568 ZNF131P52739 623 aa17.54■□□□□ 0.4
ITGB1-210ENST00000474568 BMS1Q14692 1282 aaKnown RBP17.54■□□□□ 0.4
ITGB1-210ENST00000474568 DDX12PQ92771 950 aa17.54■□□□□ 0.4
ITGB1-210ENST00000474568 STAMQ92783 540 aa17.54■□□□□ 0.4
ITGB1-210ENST00000474568 B3GALT6Q96L58 329 aa17.54■□□□□ 0.4
ITGB1-210ENST00000474568 CDCA3Q99618 268 aaPredicted RBP17.54■□□□□ 0.4
ITGB1-210ENST00000474568 CCDC94Q9BW85 323 aaPredicted RBP17.54■□□□□ 0.4
ITGB1-210ENST00000474568 COLEC11Q9BWP8 271 aa17.54■□□□□ 0.4
ITGB1-210ENST00000474568 TCF20Q9UGU0 1960 aaKnown RBP17.53■□□□□ 0.4
ITGB1-210ENST00000474568 CUTAO60888 179 aa17.53■□□□□ 0.4
ITGB1-210ENST00000474568 MCF2P10911 925 aa17.53■□□□□ 0.4
ITGB1-210ENST00000474568 PROZP22891 400 aa17.53■□□□□ 0.4
ITGB1-210ENST00000474568 ME1P48163 572 aa17.53■□□□□ 0.4
ITGB1-210ENST00000474568 YARSP54577 528 aaKnown RBP17.53■□□□□ 0.4
ITGB1-210ENST00000474568 TUSC3Q13454 348 aa17.53■□□□□ 0.4
ITGB1-210ENST00000474568 PTPN14Q15678 1187 aa17.53■□□□□ 0.4
ITGB1-210ENST00000474568 SHC4Q6S5L8 630 aa17.53■□□□□ 0.4
ITGB1-210ENST00000474568 SFR1Q86XK3 245 aa17.53■□□□□ 0.4
ITGB1-210ENST00000474568 FAM178BQ8IXR5 827 aa17.53■□□□□ 0.4
ITGB1-210ENST00000474568 DHX58Q96C10 678 aa17.53■□□□□ 0.4
ITGB1-210ENST00000474568 HERC2P3Q9BVR0 1158 aa17.53■□□□□ 0.4
ITGB1-210ENST00000474568 TBC1D7Q9P0N9 293 aa17.53■□□□□ 0.4
ITGB1-210ENST00000474568 TBX20Q9UMR3 447 aa17.53■□□□□ 0.4
ITGB1-210ENST00000474568 ZDHHC9Q9Y397 364 aa17.53■□□□□ 0.4
ITGB1-210ENST00000474568 H0YCG3 227 aa17.52■□□□□ 0.4
ITGB1-210ENST00000474568 TNFRSF10AO00220 468 aa17.52■□□□□ 0.4
ITGB1-210ENST00000474568 MBTPS2O43462 519 aa17.52■□□□□ 0.4
ITGB1-210ENST00000474568 TADA2AO75478 443 aa17.52■□□□□ 0.4
ITGB1-210ENST00000474568 TOM1L1O75674 476 aa17.52■□□□□ 0.4
ITGB1-210ENST00000474568 SOD2P04179 222 aa17.52■□□□□ 0.4
ITGB1-210ENST00000474568 IDEP14735 1019 aa17.52■□□□□ 0.4
ITGB1-210ENST00000474568 LIG4P49917 911 aa17.52■□□□□ 0.4
ITGB1-210ENST00000474568 HSP90AA2PQ14568 343 aaPredicted RBP17.52■□□□□ 0.4
ITGB1-210ENST00000474568 NOLC1Q14978 699 aaKnown RBP eCLIP17.52■□□□□ 0.4
ITGB1-210ENST00000474568 ZC2HC1CQ53FD0 456 aaPredicted RBP17.52■□□□□ 0.4
ITGB1-210ENST00000474568 KCNG4Q8TDN1 519 aa17.52■□□□□ 0.4
ITGB1-210ENST00000474568 MSLNLQ96KJ4 702 aa17.52■□□□□ 0.4
ITGB1-210ENST00000474568 FIZ1Q96SL8 496 aa17.52■□□□□ 0.4
ITGB1-210ENST00000474568 GPR62Q9BZJ7 368 aa17.52■□□□□ 0.4
ITGB1-210ENST00000474568 HAPLN2Q9GZV7 340 aa17.52■□□□□ 0.4
ITGB1-210ENST00000474568 GOLGA2P5Q9HBQ8 144 aa17.52■□□□□ 0.4
ITGB1-210ENST00000474568 HCFC2Q9Y5Z7 792 aa17.52■□□□□ 0.4
ITGB1-210ENST00000474568 ZMYM2Q9UBW7 1377 aa17.52■□□□□ 0.39
ITGB1-210ENST00000474568 HNRNPDLO14979 420 aaKnown RBP17.51■□□□□ 0.39
ITGB1-210ENST00000474568 CLDN3O15551 220 aa17.51■□□□□ 0.39
ITGB1-210ENST00000474568 KIF4AO95239 1232 aa17.51■□□□□ 0.39
ITGB1-210ENST00000474568 BRD1O95696 1058 aa17.51■□□□□ 0.39
ITGB1-210ENST00000474568 URODP06132 367 aa17.51■□□□□ 0.39
ITGB1-210ENST00000474568 SMAD4Q13485 552 aaKnown RBP17.51■□□□□ 0.39
ITGB1-210ENST00000474568 NAB2Q15742 525 aa17.51■□□□□ 0.39
ITGB1-210ENST00000474568 PUS10Q3MIT2 529 aaKnown RBP17.51■□□□□ 0.39
ITGB1-210ENST00000474568 TPRNQ4KMQ1 711 aa17.51■□□□□ 0.39
ITGB1-210ENST00000474568 AXDND1Q5T1B0 1012 aaPredicted RBP17.51■□□□□ 0.39
ITGB1-210ENST00000474568 FUT10Q6P4F1 479 aa17.51■□□□□ 0.39
ITGB1-210ENST00000474568 ZPBP2Q6X784 338 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms