RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 ITIH6Q6UXX5 1313 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 A0A1B0GUA9 196 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 P4HA2O15460 535 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 XPOTO43592 962 aaKnown RBP11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 PARNO95453 639 aaKnown RBP11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 TRIM49P0CI25 452 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 TRIM49CP0CI26 452 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 GHRP10912 638 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 CKBP12277 381 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 SELPP16109 830 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 ADSSP30520 456 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 GTF2H1P32780 548 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 RAB27AP51159 221 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 PSMD6Q15008 389 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 SYCP1Q15431 976 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 EXOC3L4Q17RC7 722 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 KRT39Q6A163 491 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 SLC39A5Q6ZMH5 540 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 LRRC8DQ7L1W4 858 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 CDR2LQ86X02 465 aaPredicted RBP11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 CNGA4Q8IV77 575 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 BRSK2Q8IWQ3 736 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 CD302Q8IX05 232 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 FAM126BQ8IXS8 530 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 CGRRF1Q99675 332 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 APOL6Q9BWW8 343 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 CHST12Q9NRB3 414 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 ZNHIT6Q9NWK9 470 aaKnown RBP11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 NOC2LQ9Y3T9 749 aaKnown RBP11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 SQORQ9Y6N5 450 aa11.14□□□□□ -0.63
PRPF38A-202ENST00000474048 GTPBP10A4D1E9 387 aaKnown RBP11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 PITPNM1O00562 1244 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 TEX33O43247 280 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 AP5Z1O43299 807 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 ADRB2P07550 413 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 STAG3L1P0CL83 205 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 IBSPP21815 317 aaPredicted RBP11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 PROZP22891 400 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 PIK3CAP42336 1068 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 FMO5P49326 533 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 POU5F1Q01860 360 aaKnown RBP11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 TRPC3Q13507 836 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 AMHR2Q16671 573 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 WDR44Q5JSH3 913 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 MIIPQ5JXC2 388 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 FBXO47Q5MNV8 452 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 ZNF618Q5T7W0 954 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 EEF1DP3Q658K8 133 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 FAM43BQ6ZT52 329 aaPredicted RBP11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 FAM228AQ86W67 206 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 WDR49Q8IV35 697 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 FMNL3Q8IVF7 1028 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 SLC35C1Q96A29 364 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 MFSD14AQ96MC6 490 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 FBXL18Q96ME1 805 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 ERGIC2Q96RQ1 377 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 RPS6KC1Q96S38 1066 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 PPP1R9BQ96SB3 815 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 LSM14BQ9BX40 385 aaKnown RBP11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 HIPK3Q9H422 1215 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 CDHR5Q9HBB8 845 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 TMEM8AQ9HCN3 771 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 PRKAG2Q9UGJ0 569 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 PARP2Q9UGN5 583 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 ST3GAL5Q9UNP4 418 aa11.13□□□□□ -0.63
PRPF38A-202ENST00000474048 LRRIQ3A6PVS8 624 aaPredicted RBP11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 AKR1B15C9JRZ8 316 aaPredicted RBP11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 CHRNA1P02708 482 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 EDN1P05305 212 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 IQCF3P0C7M6 154 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 CXCL8P10145 99 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 RFX1P22670 979 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 CD52P31358 61 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 GRM5P41594 1212 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 GCLMP48507 274 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 CDK7P50613 346 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 TFAMQ00059 246 aaKnown RBP11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 MGAT3Q09327 533 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 DUOXA2Q1HG44 320 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 TRIM60Q495X7 471 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 SEZ6Q53EL9 994 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 FAM26DQ5JW98 314 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 APTXQ7Z2E3 356 aaKnown RBP11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 PARD3BQ8TEW8 1205 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 CPLX3Q8WVH0 158 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 TMEM40Q8WWA1 233 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 PGBD4Q96DM1 585 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 PAWRQ96IZ0 340 aaKnown RBP11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 PDLIM2Q96JY6 352 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 FAM81BQ96LP2 452 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 TOX2Q96NM4 488 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 SPAG5Q96R06 1193 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 CRACR2AQ9BSW2 395 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 FTHL17Q9BXU8 183 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 IFIH1Q9BYX4 1025 aaKnown RBP11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 ASB7Q9H672 318 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 PDE11AQ9HCR9 933 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 PRDM5Q9NQX1 630 aaPredicted RBP11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 C1orf112Q9NSG2 853 aa11.12□□□□□ -0.63
PRPF38A-202ENST00000474048 FAM207AQ9NSI2 230 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms