RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 CEP57Q86XR8 500 aa13.19□□□□□ -0.3
SMPD4-217ENST00000473720 PLCD3Q8N3E9 789 aa13.19□□□□□ -0.3
SMPD4-217ENST00000473720 GSTCDQ8NEC7 633 aa13.19□□□□□ -0.3
SMPD4-217ENST00000473720 PRSS33Q8NF86 280 aa13.19□□□□□ -0.3
SMPD4-217ENST00000473720 RIN2Q8WYP3 895 aaPredicted RBP13.19□□□□□ -0.3
SMPD4-217ENST00000473720 ACSF2Q96CM8 615 aaPredicted RBP13.19□□□□□ -0.3
SMPD4-217ENST00000473720 PRIMPOLQ96LW4 560 aa13.19□□□□□ -0.3
SMPD4-217ENST00000473720 KCNH6Q9H252 994 aa13.19□□□□□ -0.3
SMPD4-217ENST00000473720 CXCL16Q9H2A7 254 aa13.19□□□□□ -0.3
SMPD4-217ENST00000473720 FZD8Q9H461 694 aa13.19□□□□□ -0.3
SMPD4-217ENST00000473720 MIA3Q5JRA6 1907 aa13.19□□□□□ -0.3
SMPD4-217ENST00000473720 CCDC169A6NNP5 214 aa13.18□□□□□ -0.3
SMPD4-217ENST00000473720 PP2D1A8MPX8 630 aa13.18□□□□□ -0.3
SMPD4-217ENST00000473720 E9PMD0 336 aa13.18□□□□□ -0.3
SMPD4-217ENST00000473720 RFPL2O75678 378 aa13.18□□□□□ -0.3
SMPD4-217ENST00000473720 RECQL4O94761 1208 aa13.18□□□□□ -0.3
SMPD4-217ENST00000473720 CDC25AP30304 524 aa13.18□□□□□ -0.3
SMPD4-217ENST00000473720 GBP2P32456 591 aaPredicted RBP13.18□□□□□ -0.3
SMPD4-217ENST00000473720 NAMPTP43490 491 aa13.18□□□□□ -0.3
SMPD4-217ENST00000473720 TOB1P50616 345 aaPredicted RBP13.18□□□□□ -0.3
SMPD4-217ENST00000473720 FXR2P51116 673 aaKnown RBP eCLIP13.18□□□□□ -0.3
SMPD4-217ENST00000473720 DSG1Q02413 1049 aa13.18□□□□□ -0.3
SMPD4-217ENST00000473720 ORC2Q13416 577 aaPredicted RBP13.18□□□□□ -0.3
SMPD4-217ENST00000473720 HSP90AA2PQ14568 343 aaPredicted RBP13.18□□□□□ -0.3
SMPD4-217ENST00000473720 PPP2R5AQ15172 486 aa13.18□□□□□ -0.3
SMPD4-217ENST00000473720 FAM187BQ17R55 369 aa13.18□□□□□ -0.3
SMPD4-217ENST00000473720 USP41Q3LFD5 358 aa13.18□□□□□ -0.3
SMPD4-217ENST00000473720 EEF1DP3Q658K8 133 aa13.18□□□□□ -0.3
SMPD4-217ENST00000473720 PRSS55Q6UWB4 352 aaPredicted RBP13.18□□□□□ -0.3
SMPD4-217ENST00000473720 C4orf32Q8N8J7 132 aa13.18□□□□□ -0.3
SMPD4-217ENST00000473720 PHOX2BQ99453 314 aa13.18□□□□□ -0.3
SMPD4-217ENST00000473720 MFSD1Q9H3U5 465 aa13.18□□□□□ -0.3
SMPD4-217ENST00000473720 PIDD1Q9HB75 910 aa13.18□□□□□ -0.3
SMPD4-217ENST00000473720 NOTCH4Q99466 2003 aa13.17□□□□□ -0.3
SMPD4-217ENST00000473720 THP07101 528 aa13.17□□□□□ -0.3
SMPD4-217ENST00000473720 AVPR2P30518 371 aa13.17□□□□□ -0.3
SMPD4-217ENST00000473720 TRAPPC10P48553 1259 aa13.17□□□□□ -0.3
SMPD4-217ENST00000473720 TUSC3Q13454 348 aa13.17□□□□□ -0.3
SMPD4-217ENST00000473720 GLRA4Q5JXX5 417 aa13.17□□□□□ -0.3
SMPD4-217ENST00000473720 ELMSAN1Q6PJG2 1045 aa13.17□□□□□ -0.3
SMPD4-217ENST00000473720 OTOP3Q7RTS5 596 aa13.17□□□□□ -0.3
SMPD4-217ENST00000473720 UBALD2Q8IYN6 164 aa13.17□□□□□ -0.3
SMPD4-217ENST00000473720 RNF168Q8IYW5 571 aaPredicted RBP13.17□□□□□ -0.3
SMPD4-217ENST00000473720 ZDHHC14Q8IZN3 488 aa13.17□□□□□ -0.3
SMPD4-217ENST00000473720 SMG7Q92540 1137 aaKnown RBP13.17□□□□□ -0.3
SMPD4-217ENST00000473720 RAB34Q9BZG1 259 aa13.17□□□□□ -0.3
SMPD4-217ENST00000473720 CCDC113Q9H0I3 377 aa13.17□□□□□ -0.3
SMPD4-217ENST00000473720 FAM86C1Q9NVL1 165 aa13.17□□□□□ -0.3
SMPD4-217ENST00000473720 USTQ9Y2C2 406 aa13.17□□□□□ -0.3
SMPD4-217ENST00000473720 SF3B1O75533 1304 aaKnown RBP eCLIP13.16□□□□□ -0.32e-10■■■■■ 48.1
SMPD4-217ENST00000473720 K7ERI5 159 aa13.16□□□□□ -0.3
SMPD4-217ENST00000473720 ACKR2O00590 384 aa13.16□□□□□ -0.3
SMPD4-217ENST00000473720 PTGESO14684 152 aa13.16□□□□□ -0.3
SMPD4-217ENST00000473720 TGM5O43548 720 aa13.16□□□□□ -0.3
SMPD4-217ENST00000473720 ST18O60284 1047 aa13.16□□□□□ -0.3
SMPD4-217ENST00000473720 HIP1RO75146 1068 aa13.16□□□□□ -0.3
SMPD4-217ENST00000473720 KIF4AO95239 1232 aa13.16□□□□□ -0.3
SMPD4-217ENST00000473720 MUTP22033 750 aa13.16□□□□□ -0.3
SMPD4-217ENST00000473720 U2AF2P26368 475 aaKnown RBP eCLIP13.16□□□□□ -0.3
SMPD4-217ENST00000473720 PTPN5P54829 565 aa13.16□□□□□ -0.3
SMPD4-217ENST00000473720 PEX3P56589 373 aa13.16□□□□□ -0.3
SMPD4-217ENST00000473720 OSTNP61366 133 aa13.16□□□□□ -0.3
SMPD4-217ENST00000473720 RAD51AP2Q09MP3 1159 aa13.16□□□□□ -0.3
SMPD4-217ENST00000473720 ATF7IP2Q5U623 682 aa13.16□□□□□ -0.3
SMPD4-217ENST00000473720 FAM171A1Q5VUB5 890 aa13.16□□□□□ -0.3
SMPD4-217ENST00000473720 KRT79Q5XKE5 535 aa13.16□□□□□ -0.3
SMPD4-217ENST00000473720 DTHD1Q6ZMT9 781 aa13.16□□□□□ -0.3
SMPD4-217ENST00000473720 C15orf39Q6ZRI6 1047 aa13.16□□□□□ -0.3
SMPD4-217ENST00000473720 ST13P5Q8NFI4 369 aaPredicted RBP13.16□□□□□ -0.3
SMPD4-217ENST00000473720 KIFAP3Q92845 792 aa13.16□□□□□ -0.3
SMPD4-217ENST00000473720 PLIN2Q99541 437 aa13.16□□□□□ -0.3
SMPD4-217ENST00000473720 CHST7Q9NS84 486 aa13.16□□□□□ -0.3
SMPD4-217ENST00000473720 DPP7Q9UHL4 492 aa13.16□□□□□ -0.3
SMPD4-217ENST00000473720 DNM3Q9UQ16 869 aa13.16□□□□□ -0.3
SMPD4-217ENST00000473720 EFEMP2O95967 443 aa13.15□□□□□ -0.3
SMPD4-217ENST00000473720 HARSP12081 509 aaKnown RBP13.15□□□□□ -0.3
SMPD4-217ENST00000473720 PDIA5Q14554 519 aa13.15□□□□□ -0.3
SMPD4-217ENST00000473720 RABEP1Q15276 862 aa13.15□□□□□ -0.3
SMPD4-217ENST00000473720 IL17AQ16552 155 aa13.15□□□□□ -0.3
SMPD4-217ENST00000473720 DCAF4L1Q3SXM0 396 aa13.15□□□□□ -0.3
SMPD4-217ENST00000473720 RTP2Q5QGT7 225 aa13.15□□□□□ -0.3
SMPD4-217ENST00000473720 NT5DC1Q5TFE4 455 aa13.15□□□□□ -0.3
SMPD4-217ENST00000473720 GET4Q7L5D6 327 aaPredicted RBP13.15□□□□□ -0.3
SMPD4-217ENST00000473720 IGSF22Q8N9C0 903 aa13.15□□□□□ -0.3
SMPD4-217ENST00000473720 FLCNQ8NFG4 579 aa13.15□□□□□ -0.3
SMPD4-217ENST00000473720 RSAD2Q8WXG1 361 aa13.15□□□□□ -0.3
SMPD4-217ENST00000473720 RXFP1Q9HBX9 757 aa13.15□□□□□ -0.3
SMPD4-217ENST00000473720 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.15□□□□□ -0.3
SMPD4-217ENST00000473720 FBXL21Q9UKT6 434 aa13.15□□□□□ -0.3
SMPD4-217ENST00000473720 KIF3AQ9Y496 699 aa13.15□□□□□ -0.3
SMPD4-217ENST00000473720 CLUHO75153 1309 aa13.14□□□□□ -0.31
SMPD4-217ENST00000473720 SFI1A8K8P3 1242 aa13.14□□□□□ -0.31
SMPD4-217ENST00000473720 H0Y858 1186 aa13.14□□□□□ -0.31
SMPD4-217ENST00000473720 H3BQV1 296 aa13.14□□□□□ -0.31
SMPD4-217ENST00000473720 N4BP1O75113 896 aaKnown RBP13.14□□□□□ -0.31
SMPD4-217ENST00000473720 GJB2P29033 226 aa13.14□□□□□ -0.31
SMPD4-217ENST00000473720 EFNA5P52803 228 aa13.14□□□□□ -0.31
SMPD4-217ENST00000473720 TCF15Q12870 199 aa13.14□□□□□ -0.31
SMPD4-217ENST00000473720 DMP1Q13316 513 aaPredicted RBP13.14□□□□□ -0.31
SMPD4-217ENST00000473720 PSMD5Q16401 504 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms