RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 USP41Q3LFD5 358 aa14.04□□□□□ -0.16
TRAF4-209ENST00000473421 NOTUMQ6P988 496 aa14.04□□□□□ -0.16
TRAF4-209ENST00000473421 TSSK4Q6SA08 328 aa14.04□□□□□ -0.16
TRAF4-209ENST00000473421 RSPO2Q6UXX9 243 aaPredicted RBP14.04□□□□□ -0.16
TRAF4-209ENST00000473421 IFNLR1Q8IU57 520 aaPredicted RBP14.04□□□□□ -0.16
TRAF4-209ENST00000473421 TPH2Q8IWU9 490 aa14.04□□□□□ -0.16
TRAF4-209ENST00000473421 CNNM3Q8NE01 707 aa14.04□□□□□ -0.16
TRAF4-209ENST00000473421 LNX1Q8TBB1 728 aaPredicted RBP14.04□□□□□ -0.16
TRAF4-209ENST00000473421 HDAC7Q8WUI4 952 aa14.04□□□□□ -0.16
TRAF4-209ENST00000473421 FGF13Q92913 245 aa14.04□□□□□ -0.16
TRAF4-209ENST00000473421 FAM20AQ96MK3 541 aa14.04□□□□□ -0.16
TRAF4-209ENST00000473421 MTRQ99707 1265 aa14.04□□□□□ -0.16
TRAF4-209ENST00000473421 KXD1Q9BQD3 176 aa14.04□□□□□ -0.16
TRAF4-209ENST00000473421 PHF20Q9BVI0 1012 aa14.04□□□□□ -0.16
TRAF4-209ENST00000473421 PLA2G2FQ9BZM2 168 aa14.04□□□□□ -0.16
TRAF4-209ENST00000473421 UBN1Q9NPG3 1134 aa14.04□□□□□ -0.16
TRAF4-209ENST00000473421 FBXW11Q9UKB1 542 aa14.04□□□□□ -0.16
TRAF4-209ENST00000473421 CDH7Q9ULB5 785 aa14.04□□□□□ -0.16
TRAF4-209ENST00000473421 GIT1Q9Y2X7 761 aa14.04□□□□□ -0.16
TRAF4-209ENST00000473421 CACNA1BQ00975 2339 aa14.04□□□□□ -0.16
TRAF4-209ENST00000473421 KANSL1LA0AUZ9 987 aa14.03□□□□□ -0.16
TRAF4-209ENST00000473421 PTGESO14684 152 aa14.03□□□□□ -0.16
TRAF4-209ENST00000473421 ASAP2O43150 1006 aa14.03□□□□□ -0.16
TRAF4-209ENST00000473421 CCNT1O60563 726 aaKnown RBP14.03□□□□□ -0.16
TRAF4-209ENST00000473421 KIF4AO95239 1232 aa14.03□□□□□ -0.16
TRAF4-209ENST00000473421 DEXIO95424 95 aa14.03□□□□□ -0.16
TRAF4-209ENST00000473421 EDN1P05305 212 aa14.03□□□□□ -0.16
TRAF4-209ENST00000473421 FZD5Q13467 585 aa14.03□□□□□ -0.16
TRAF4-209ENST00000473421 SLC44A4Q53GD3 710 aa14.03□□□□□ -0.16
TRAF4-209ENST00000473421 PIK3AP1Q6ZUJ8 805 aa14.03□□□□□ -0.16
TRAF4-209ENST00000473421 KRT25Q7Z3Z0 450 aa14.03□□□□□ -0.16
TRAF4-209ENST00000473421 NEK8Q86SG6 692 aa14.03□□□□□ -0.16
TRAF4-209ENST00000473421 TRIM22Q8IYM9 498 aa14.03□□□□□ -0.16
TRAF4-209ENST00000473421 C22orf23Q9BZE7 217 aa14.03□□□□□ -0.16
TRAF4-209ENST00000473421 GPRC5CQ9NQ84 441 aa14.03□□□□□ -0.16
TRAF4-209ENST00000473421 PARP2Q9UGN5 583 aa14.03□□□□□ -0.16
TRAF4-209ENST00000473421 TPRP12270 2363 aaKnown RBP14.03□□□□□ -0.16
TRAF4-209ENST00000473421 EPG5Q9HCE0 2579 aa14.02□□□□□ -0.16
TRAF4-209ENST00000473421 FAM170BA6NMN3 283 aa14.02□□□□□ -0.17
TRAF4-209ENST00000473421 TADA2AO75478 443 aa14.02□□□□□ -0.17
TRAF4-209ENST00000473421 TGM1P22735 817 aa14.02□□□□□ -0.17
TRAF4-209ENST00000473421 AXLP30530 894 aa14.02□□□□□ -0.17
TRAF4-209ENST00000473421 CSTF1Q05048 431 aaKnown RBP14.02□□□□□ -0.17
TRAF4-209ENST00000473421 UBXN2BQ14CS0 331 aa14.02□□□□□ -0.17
TRAF4-209ENST00000473421 NAB2Q15742 525 aa14.02□□□□□ -0.17
TRAF4-209ENST00000473421 MLF2Q15773 248 aaPredicted RBP14.02□□□□□ -0.17
TRAF4-209ENST00000473421 FAM171A1Q5VUB5 890 aa14.02□□□□□ -0.17
TRAF4-209ENST00000473421 PPP4R3AQ6IN85 833 aa14.02□□□□□ -0.17
TRAF4-209ENST00000473421 RUFY3Q7L099 469 aa14.02□□□□□ -0.17
TRAF4-209ENST00000473421 CEP57Q86XR8 500 aa14.02□□□□□ -0.17
TRAF4-209ENST00000473421 TCP11Q8WWU5 503 aa14.02□□□□□ -0.17
TRAF4-209ENST00000473421 ING5Q8WYH8 240 aa14.02□□□□□ -0.17
TRAF4-209ENST00000473421 ZSWIM4Q9H7M6 989 aa14.02□□□□□ -0.17
TRAF4-209ENST00000473421 ZSWIM6Q9HCJ5 1215 aa14.02□□□□□ -0.17
TRAF4-209ENST00000473421 SPATA6Q9NWH7 488 aaPredicted RBP14.02□□□□□ -0.17
TRAF4-209ENST00000473421 DNMT3BQ9UBC3 853 aaKnown RBP14.02□□□□□ -0.17
TRAF4-209ENST00000473421 DPP7Q9UHL4 492 aa14.02□□□□□ -0.17
TRAF4-209ENST00000473421 POLIQ9UNA4 740 aa14.02□□□□□ -0.17
TRAF4-209ENST00000473421 A0A1B0GUA9 196 aa14.01□□□□□ -0.17
TRAF4-209ENST00000473421 C8AP07357 584 aa14.01□□□□□ -0.17
TRAF4-209ENST00000473421 TARSP26639 723 aaKnown RBP14.01□□□□□ -0.17
TRAF4-209ENST00000473421 GRIK3Q13003 919 aa14.01□□□□□ -0.17
TRAF4-209ENST00000473421 NR5A1Q13285 461 aa14.01□□□□□ -0.17
TRAF4-209ENST00000473421 HSP90AA2PQ14568 343 aaPredicted RBP14.01□□□□□ -0.17
TRAF4-209ENST00000473421 CD300LGQ6UXG3 332 aa14.01□□□□□ -0.17
TRAF4-209ENST00000473421 MAEAQ7L5Y9 396 aa14.01□□□□□ -0.17
TRAF4-209ENST00000473421 NPAS3Q8IXF0 933 aa14.01□□□□□ -0.17
TRAF4-209ENST00000473421 PIGOQ8TEQ8 1089 aa14.01□□□□□ -0.17
TRAF4-209ENST00000473421 CCDC51Q96ER9 411 aa14.01□□□□□ -0.17
TRAF4-209ENST00000473421 HSD17B14Q9BPX1 270 aa14.01□□□□□ -0.17
TRAF4-209ENST00000473421 EIF2AK1Q9BQI3 630 aaKnown RBP14.01□□□□□ -0.17
TRAF4-209ENST00000473421 LTB4R2Q9NPC1 389 aa14.01□□□□□ -0.17
TRAF4-209ENST00000473421 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.01□□□□□ -0.17
TRAF4-209ENST00000473421 KMT2BQ9UMN6 2715 aaPredicted RBP14.01□□□□□ -0.17
TRAF4-209ENST00000473421 CCDC194A0A1B0GVG4 234 aa14□□□□□ -0.17
TRAF4-209ENST00000473421 KINO60870 393 aaKnown RBP14□□□□□ -0.17
TRAF4-209ENST00000473421 CTDNEP1O95476 244 aa14□□□□□ -0.17
TRAF4-209ENST00000473421 C1RP00736 705 aa14□□□□□ -0.17
TRAF4-209ENST00000473421 ATXN1P54253 815 aaKnown RBP14□□□□□ -0.17
TRAF4-209ENST00000473421 SCRN1Q12765 414 aa14□□□□□ -0.17
TRAF4-209ENST00000473421 TUSC3Q13454 348 aa14□□□□□ -0.17
TRAF4-209ENST00000473421 MXD4Q14582 209 aaPredicted RBP14□□□□□ -0.17
TRAF4-209ENST00000473421 PSMD5Q16401 504 aa14□□□□□ -0.17
TRAF4-209ENST00000473421 SLC5A9Q2M3M2 681 aa14□□□□□ -0.17
TRAF4-209ENST00000473421 VARS2Q5ST30 1063 aaKnown RBP14□□□□□ -0.17
TRAF4-209ENST00000473421 SLC27A1Q6PCB7 646 aa14□□□□□ -0.17
TRAF4-209ENST00000473421 ELMSAN1Q6PJG2 1045 aa14□□□□□ -0.17
TRAF4-209ENST00000473421 ZC3H14Q6PJT7 736 aaKnown RBP14□□□□□ -0.17
TRAF4-209ENST00000473421 OTUD6AQ7L8S5 288 aa14□□□□□ -0.17
TRAF4-209ENST00000473421 GPR65Q8IYL9 337 aa14□□□□□ -0.17
TRAF4-209ENST00000473421 SLC7A14Q8TBB6 771 aa14□□□□□ -0.17
TRAF4-209ENST00000473421 PIK3R5Q8WYR1 880 aa14□□□□□ -0.17
TRAF4-209ENST00000473421 BSNDQ8WZ55 320 aa14□□□□□ -0.17
TRAF4-209ENST00000473421 ZNF274Q96GC6 653 aaPredicted RBP14□□□□□ -0.17
TRAF4-209ENST00000473421 TTPALQ9BTX7 342 aa14□□□□□ -0.17
TRAF4-209ENST00000473421 TRIM6Q9C030 488 aaPredicted RBP14□□□□□ -0.17
TRAF4-209ENST00000473421 POLR3FQ9H1D9 316 aaPredicted RBP14□□□□□ -0.17
TRAF4-209ENST00000473421 PARD6AQ9NPB6 346 aa14□□□□□ -0.17
TRAF4-209ENST00000473421 SNTG2Q9NY99 539 aa14□□□□□ -0.17
TRAF4-209ENST00000473421 PPME1Q9Y570 386 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms