RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 DEXIO95424 95 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 DCNP07585 359 aaKnown RBP7.7□□□□□ -1.18
CKS1B-205ENST00000473344 SPATA31D3P0C874 917 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 PDIA3P30101 505 aaKnown RBP7.7□□□□□ -1.18
CKS1B-205ENST00000473344 AXLP30530 894 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 HOXA11P31270 313 aaPredicted RBP7.7□□□□□ -1.18
CKS1B-205ENST00000473344 YWHABP31946 246 aaKnown RBP7.7□□□□□ -1.18
CKS1B-205ENST00000473344 HSPA4P34932 840 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 CREMQ03060 361 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 TFDP1Q14186 410 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 MXD4Q14582 209 aaPredicted RBP7.7□□□□□ -1.18
CKS1B-205ENST00000473344 PCBP1Q15365 356 aaKnown RBP eCLIP7.7□□□□□ -1.18
CKS1B-205ENST00000473344 SWT1Q5T5J6 900 aaKnown RBP7.7□□□□□ -1.18
CKS1B-205ENST00000473344 B3GNT9Q6UX72 402 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 SPATA31D4Q6ZUB0 917 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 TAS1R1Q7RTX1 841 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 DGLUCYQ7Z3D6 616 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 KRT25Q7Z3Z0 450 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 COLGALT2Q8IYK4 626 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 KIAA2013Q8IYS2 634 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 FBXL16Q8N461 479 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 GPR152Q8TDT2 470 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 HDAC7Q8WUI4 952 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 RIN2Q8WYP3 895 aaPredicted RBP7.7□□□□□ -1.18
CKS1B-205ENST00000473344 FAM20AQ96MK3 541 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 CCDC43Q96MW1 224 aaKnown RBP7.7□□□□□ -1.18
CKS1B-205ENST00000473344 GAD1Q99259 594 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 COLEC11Q9BWP8 271 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 APOL6Q9BWW8 343 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 RHOBTB2Q9BYZ6 727 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 DHX33Q9H6R0 707 aaKnown RBP7.7□□□□□ -1.18
CKS1B-205ENST00000473344 MINDY3Q9H8M7 445 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 TBC1D17Q9HA65 648 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 ARHGEF3Q9NR81 526 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.7□□□□□ -1.18
CKS1B-205ENST00000473344 MARCH5Q9NX47 278 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 ZDHHC7Q9NXF8 308 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 EPS15L1Q9UBC2 864 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 IPPQ9Y573 584 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 R4GN57 208 aa7.7□□□□□ -1.18
CKS1B-205ENST00000473344 EVPLQ92817 2033 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 EML1O00423 815 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 LCE2BO14633 110 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 TGM5O43548 720 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 SLC37A4O43826 429 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 CCNT1O60563 726 aaKnown RBP7.69□□□□□ -1.18
CKS1B-205ENST00000473344 TADA2AO75478 443 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 BAG4O95429 457 aaKnown RBP7.69□□□□□ -1.18
CKS1B-205ENST00000473344 LAMP2P13473 410 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 GCFC2P16383 781 aaKnown RBP7.69□□□□□ -1.18
CKS1B-205ENST00000473344 XBP1P17861 261 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 SCNN1GP51170 649 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 DSG1Q02413 1049 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 PPP2R5CQ13362 524 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 EMC2Q15006 297 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 INF2Q27J81 1249 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 USP41Q3LFD5 358 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 XKR9Q5GH70 373 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 UBXN11Q5T124 520 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 KIAA0319Q5VV43 1072 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 NCAPH2Q6IBW4 605 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 PPP4R3AQ6IN85 833 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 PHLDB3Q6NSJ2 640 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 DCLRE1AQ6PJP8 1040 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 CENPQQ7L2Z9 268 aaPredicted RBP7.69□□□□□ -1.18
CKS1B-205ENST00000473344 NEK8Q86SG6 692 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 FERMT3Q86UX7 667 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 GLYCTKQ8IVS8 523 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 C1orf210Q8IVY1 113 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 C4orf19Q8IY42 314 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 FAM177A1Q8N128 213 aaPredicted RBP7.69□□□□□ -1.18
CKS1B-205ENST00000473344 SMG8Q8ND04 991 aaKnown RBP7.69□□□□□ -1.18
CKS1B-205ENST00000473344 TRIM44Q96DX7 344 aaPredicted RBP7.69□□□□□ -1.18
CKS1B-205ENST00000473344 CCDC51Q96ER9 411 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 SHDQ96IW2 340 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 CPB2Q96IY4 423 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 ZFP42Q96MM3 310 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 MBOAT7Q96N66 472 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 MYADMQ96S97 322 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 NAP1L4Q99733 375 aaKnown RBP7.69□□□□□ -1.18
CKS1B-205ENST00000473344 LXNQ9BS40 222 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 EIF2AQ9BY44 585 aaKnown RBP7.69□□□□□ -1.18
CKS1B-205ENST00000473344 AGXT2Q9BYV1 514 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 NT5C3AQ9H0P0 336 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 ZSWIM4Q9H7M6 989 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 RXFP1Q9HBX9 757 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 GIT1Q9Y2X7 761 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 HES2Q9Y543 173 aa7.69□□□□□ -1.18
CKS1B-205ENST00000473344 ZFP37Q9Y6Q3 630 aaPredicted RBP7.69□□□□□ -1.18
CKS1B-205ENST00000473344 MYH9P35579 1960 aaKnown RBP7.68□□□□□ -1.18
CKS1B-205ENST00000473344 M0R2N6 131 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 TSPAN1O60635 241 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 KINO60870 393 aaKnown RBP7.68□□□□□ -1.18
CKS1B-205ENST00000473344 CDKL5O76039 1030 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 REC8O95072 547 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 C1RP00736 705 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 FSHRP23945 695 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 AKAP5P24588 427 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 EVCP57679 992 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 CYP4A11Q02928 519 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms