RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 ACAP3Q96P50 834 aa22.71■■□□□ 1.23
TOP3A-204ENST00000472959 MSTO1Q9BUK6 570 aa22.71■■□□□ 1.23
TOP3A-204ENST00000472959 HAPLN2Q9GZV7 340 aa22.71■■□□□ 1.23
TOP3A-204ENST00000472959 CWH43Q9H720 699 aa22.71■■□□□ 1.23
TOP3A-204ENST00000472959 CERS4Q9HA82 394 aa22.71■■□□□ 1.23
TOP3A-204ENST00000472959 RMND1Q9NWS8 449 aa22.71■■□□□ 1.23
TOP3A-204ENST00000472959 MTUS1Q9ULD2 1270 aa22.71■■□□□ 1.23
TOP3A-204ENST00000472959 PCDHB12Q9Y5F1 795 aa22.71■■□□□ 1.23
TOP3A-204ENST00000472959 OGTO15294 1046 aa22.7■■□□□ 1.22
TOP3A-204ENST00000472959 CLTAP09496 248 aa22.7■■□□□ 1.22
TOP3A-204ENST00000472959 CTNNB1P35222 781 aa22.7■■□□□ 1.22
TOP3A-204ENST00000472959 STK4Q13043 487 aa22.7■■□□□ 1.22
TOP3A-204ENST00000472959 SPRED2Q7Z698 418 aa22.7■■□□□ 1.22
TOP3A-204ENST00000472959 FBXO22Q8NEZ5 403 aa22.7■■□□□ 1.22
TOP3A-204ENST00000472959 SCFD1Q8WVM8 642 aa22.7■■□□□ 1.22
TOP3A-204ENST00000472959 ZFP42Q96MM3 310 aa22.7■■□□□ 1.22
TOP3A-204ENST00000472959 FAM161BQ96MY7 647 aa22.7■■□□□ 1.22
TOP3A-204ENST00000472959 GSDMAQ96QA5 445 aa22.7■■□□□ 1.22
TOP3A-204ENST00000472959 RPS6KC1Q96S38 1066 aa22.7■■□□□ 1.22
TOP3A-204ENST00000472959 LMBRD1Q9NUN5 540 aa22.7■■□□□ 1.22
TOP3A-204ENST00000472959 MTMR10Q9NXD2 777 aa22.7■■□□□ 1.22
TOP3A-204ENST00000472959 KLK14Q9P0G3 267 aa22.7■■□□□ 1.22
TOP3A-204ENST00000472959 GBF1Q92538 1859 aa22.7■■□□□ 1.22
TOP3A-204ENST00000472959 POMCP01189 267 aa22.69■■□□□ 1.22
TOP3A-204ENST00000472959 HOXD13P35453 343 aa22.69■■□□□ 1.22
TOP3A-204ENST00000472959 AFF1P51825 1210 aaKnown RBP22.69■■□□□ 1.22
TOP3A-204ENST00000472959 OSTNP61366 133 aa22.69■■□□□ 1.22
TOP3A-204ENST00000472959 SNRPFP62306 86 aaKnown RBP22.69■■□□□ 1.22
TOP3A-204ENST00000472959 CEP120Q8N960 986 aa22.69■■□□□ 1.22
TOP3A-204ENST00000472959 GSTCDQ8NEC7 633 aa22.69■■□□□ 1.22
TOP3A-204ENST00000472959 FAM193BQ96PV7 902 aaPredicted RBP22.69■■□□□ 1.22
TOP3A-204ENST00000472959 C11orf84Q9BUA3 381 aaPredicted RBP22.69■■□□□ 1.22
TOP3A-204ENST00000472959 GBP3Q9H0R5 595 aa22.69■■□□□ 1.22
TOP3A-204ENST00000472959 KIF20AO95235 890 aa22.68■■□□□ 1.22
TOP3A-204ENST00000472959 GARTP22102 1010 aa22.68■■□□□ 1.22
TOP3A-204ENST00000472959 ADSSP30520 456 aa22.68■■□□□ 1.22
TOP3A-204ENST00000472959 ALDH7A1P49419 539 aaKnown RBP22.68■■□□□ 1.22
TOP3A-204ENST00000472959 SCNN1GP51170 649 aa22.68■■□□□ 1.22
TOP3A-204ENST00000472959 GRIK3Q13003 919 aa22.68■■□□□ 1.22
TOP3A-204ENST00000472959 COLGALT1Q8NBJ5 622 aa22.68■■□□□ 1.22
TOP3A-204ENST00000472959 KIAA0895Q8NCT3 520 aa22.68■■□□□ 1.22
TOP3A-204ENST00000472959 SPATA20Q8TB22 786 aa22.68■■□□□ 1.22
TOP3A-204ENST00000472959 POMGNT1Q8WZA1 660 aa22.68■■□□□ 1.22
TOP3A-204ENST00000472959 P2RX5Q93086 422 aa22.68■■□□□ 1.22
TOP3A-204ENST00000472959 SMARCE1Q969G3 411 aa22.68■■□□□ 1.22
TOP3A-204ENST00000472959 ZNF558Q96NG5 402 aa22.68■■□□□ 1.22
TOP3A-204ENST00000472959 GTPBP4Q9BZE4 634 aaKnown RBP22.68■■□□□ 1.22
TOP3A-204ENST00000472959 PRDM12Q9H4Q4 367 aa22.68■■□□□ 1.22
TOP3A-204ENST00000472959 PLEKHA5Q9HAU0 1116 aa22.68■■□□□ 1.22
TOP3A-204ENST00000472959 HCSTQ9UBK5 93 aa22.68■■□□□ 1.22
TOP3A-204ENST00000472959 AGO2Q9UKV8 859 aaKnown RBP22.68■■□□□ 1.22
TOP3A-204ENST00000472959 TISP43B9A030 160 aa22.67■■□□□ 1.22
TOP3A-204ENST00000472959 H3BNC9 293 aa22.67■■□□□ 1.22
TOP3A-204ENST00000472959 KIAA0391O15091 583 aaKnown RBP22.67■■□□□ 1.22
TOP3A-204ENST00000472959 FAM189A1O60320 539 aa22.67■■□□□ 1.22
TOP3A-204ENST00000472959 PPM1AP35813 382 aa22.67■■□□□ 1.22
TOP3A-204ENST00000472959 POU5F1Q01860 360 aaKnown RBP22.67■■□□□ 1.22
TOP3A-204ENST00000472959 KNOP1Q1ED39 458 aaKnown RBP22.67■■□□□ 1.22
TOP3A-204ENST00000472959 XKR4Q5GH76 650 aa22.67■■□□□ 1.22
TOP3A-204ENST00000472959 KCNT2Q6UVM3 1135 aa22.67■■□□□ 1.22
TOP3A-204ENST00000472959 ALKAL1Q6UXT8 129 aa22.67■■□□□ 1.22
TOP3A-204ENST00000472959 HS2ST1Q7LGA3 356 aa22.67■■□□□ 1.22
TOP3A-204ENST00000472959 ZNF280BQ86YH2 543 aa22.67■■□□□ 1.22
TOP3A-204ENST00000472959 TMEM175Q9BSA9 504 aa22.67■■□□□ 1.22
TOP3A-204ENST00000472959 IKZF4Q9H2S9 585 aa22.67■■□□□ 1.22
TOP3A-204ENST00000472959 NRDE2Q9H7Z3 1164 aa22.67■■□□□ 1.22
TOP3A-204ENST00000472959 MIOSQ9NXC5 875 aa22.67■■□□□ 1.22
TOP3A-204ENST00000472959 CGNQ9P2M7 1197 aaKnown RBP22.67■■□□□ 1.22
TOP3A-204ENST00000472959 PCDHA5Q9Y5H7 936 aa22.67■■□□□ 1.22
TOP3A-204ENST00000472959 EPOPA6NHQ4 379 aa22.66■■□□□ 1.22
TOP3A-204ENST00000472959 ZC3H11AO75152 810 aaKnown RBP eCLIP22.66■■□□□ 1.22
TOP3A-204ENST00000472959 THP07101 528 aa22.66■■□□□ 1.22
TOP3A-204ENST00000472959 BCAR1P56945 870 aa22.66■■□□□ 1.22
TOP3A-204ENST00000472959 DSC1Q08554 894 aa22.66■■□□□ 1.22
TOP3A-204ENST00000472959 GPM6BQ13491 265 aa22.66■■□□□ 1.22
TOP3A-204ENST00000472959 GOLGA5Q8TBA6 731 aa22.66■■□□□ 1.22
TOP3A-204ENST00000472959 SNX27Q96L92 541 aa22.66■■□□□ 1.22
TOP3A-204ENST00000472959 CDX2Q99626 313 aaPredicted RBP22.66■■□□□ 1.22
TOP3A-204ENST00000472959 FNDC1Q4ZHG4 1894 aaPredicted RBP22.66■■□□□ 1.22
TOP3A-204ENST00000472959 PTGESO14684 152 aa22.65■■□□□ 1.22
TOP3A-204ENST00000472959 DDHD2O94830 711 aa22.65■■□□□ 1.22
TOP3A-204ENST00000472959 LDHAP00338 332 aaKnown RBP22.65■■□□□ 1.22
TOP3A-204ENST00000472959 ALDH2P05091 517 aa22.65■■□□□ 1.22
TOP3A-204ENST00000472959 KCNE1P15382 129 aa22.65■■□□□ 1.22
TOP3A-204ENST00000472959 SLC10A6Q3KNW5 377 aa22.65■■□□□ 1.22
TOP3A-204ENST00000472959 SEZ6Q53EL9 994 aa22.65■■□□□ 1.22
TOP3A-204ENST00000472959 ARMCX5Q6P1M9 558 aa22.65■■□□□ 1.22
TOP3A-204ENST00000472959 NELFCDQ8IXH7 590 aa22.65■■□□□ 1.22
TOP3A-204ENST00000472959 COLGALT2Q8IYK4 626 aa22.65■■□□□ 1.22
TOP3A-204ENST00000472959 KLHL23Q8NBE8 558 aa22.65■■□□□ 1.22
TOP3A-204ENST00000472959 GUCD1Q96NT3 240 aa22.65■■□□□ 1.22
TOP3A-204ENST00000472959 TSPAN18Q96SJ8 248 aa22.65■■□□□ 1.22
TOP3A-204ENST00000472959 GAS2L1Q99501 681 aaPredicted RBP22.65■■□□□ 1.22
TOP3A-204ENST00000472959 RPF1Q9H9Y2 349 aaKnown RBP22.65■■□□□ 1.22
TOP3A-204ENST00000472959 SPG21Q9NZD8 308 aa22.65■■□□□ 1.22
TOP3A-204ENST00000472959 CNTN3Q9P232 1028 aa22.65■■□□□ 1.22
TOP3A-204ENST00000472959 CPSF3Q9UKF6 684 aaKnown RBP22.65■■□□□ 1.22
TOP3A-204ENST00000472959 PLAGL2Q9UPG8 496 aa22.65■■□□□ 1.22
TOP3A-204ENST00000472959 CHD9Q3L8U1 2897 aa22.64■■□□□ 1.22
TOP3A-204ENST00000472959 SMIM28A0A1B0GU29 152 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms