RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 L1TD1Q5T7N2 865 aaKnown RBP7.08□□□□□ -1.28
HDAC1-205ENST00000472928 PCNX4Q63HM2 1172 aa7.08□□□□□ -1.28
HDAC1-205ENST00000472928 CWF19L1Q69YN2 538 aaKnown RBP7.08□□□□□ -1.28
HDAC1-205ENST00000472928 TAF2Q6P1X5 1199 aa7.08□□□□□ -1.28
HDAC1-205ENST00000472928 METTL7BQ6UX53 244 aa7.08□□□□□ -1.28
HDAC1-205ENST00000472928 KRBA2Q6ZNG9 492 aa7.08□□□□□ -1.28
HDAC1-205ENST00000472928 RBM43Q6ZSC3 357 aaKnown RBP7.08□□□□□ -1.28
HDAC1-205ENST00000472928 TSHZ1Q6ZSZ6 1077 aa7.08□□□□□ -1.28
HDAC1-205ENST00000472928 CABP7Q86V35 215 aa7.08□□□□□ -1.28
HDAC1-205ENST00000472928 PLA2G4DQ86XP0 818 aa7.08□□□□□ -1.28
HDAC1-205ENST00000472928 SLFN12Q8IYM2 578 aa7.08□□□□□ -1.28
HDAC1-205ENST00000472928 UBALD2Q8IYN6 164 aa7.08□□□□□ -1.28
HDAC1-205ENST00000472928 CEP57L1Q8IYX8 460 aa7.08□□□□□ -1.28
HDAC1-205ENST00000472928 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.08□□□□□ -1.28
HDAC1-205ENST00000472928 CNNM3Q8NE01 707 aa7.08□□□□□ -1.28
HDAC1-205ENST00000472928 SNX29Q8TEQ0 813 aa7.08□□□□□ -1.28
HDAC1-205ENST00000472928 HAS1Q92839 578 aa7.08□□□□□ -1.28
HDAC1-205ENST00000472928 GJA10Q969M2 543 aa7.08□□□□□ -1.28
HDAC1-205ENST00000472928 AK8Q96MA6 479 aa7.08□□□□□ -1.28
HDAC1-205ENST00000472928 INPP4AQ96PE3 977 aaPredicted RBP7.08□□□□□ -1.28
HDAC1-205ENST00000472928 SDF4Q9BRK5 362 aa7.08□□□□□ -1.28
HDAC1-205ENST00000472928 PYM1Q9BRP8 204 aaKnown RBP7.08□□□□□ -1.28
HDAC1-205ENST00000472928 APOL5Q9BWW9 433 aa7.08□□□□□ -1.28
HDAC1-205ENST00000472928 KCNMB3Q9NPA1 279 aa7.08□□□□□ -1.28
HDAC1-205ENST00000472928 DISC1Q9NRI5 854 aa7.08□□□□□ -1.28
HDAC1-205ENST00000472928 MAP3K20Q9NYL2 800 aaKnown RBP7.08□□□□□ -1.28
HDAC1-205ENST00000472928 SERTAD1Q9UHV2 236 aa7.08□□□□□ -1.28
HDAC1-205ENST00000472928 SORCS3Q9UPU3 1222 aa7.08□□□□□ -1.28
HDAC1-205ENST00000472928 CDY2AQ9Y6F7 541 aa7.08□□□□□ -1.28
HDAC1-205ENST00000472928 NRCAMQ92823 1304 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 GOLGA6L3A6NEY3 463 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 SOWAHDA6NJG2 315 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 SPATA31C2B4DYI2 1134 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 NOP56O00567 594 aaKnown RBP7.07□□□□□ -1.28
HDAC1-205ENST00000472928 TBX3O15119 743 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 MSH4O15457 936 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 LILRA1O75019 489 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 CCDC192P0DO97 292 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 PLCG1P19174 1290 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 WEE1P30291 646 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 CDC25AP30304 524 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 UBA7P41226 1012 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 MRPS9P82933 396 aaKnown RBP7.07□□□□□ -1.28
HDAC1-205ENST00000472928 UBE3AQ05086 875 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 TYRO3Q06418 890 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 STX1AQ16623 288 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 LONRF3Q496Y0 759 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 CEP55Q53EZ4 464 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 MARCH8Q5T0T0 291 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 UTP14CQ5TAP6 766 aaKnown RBP7.07□□□□□ -1.28
HDAC1-205ENST00000472928 NCAPH2Q6IBW4 605 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 CYFIP1Q7L576 1253 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 GRAMD1CQ8IYS0 662 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 CCDC116Q8IYX3 515 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 IGSF22Q8N9C0 903 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 CYP2W1Q8TAV3 490 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 MICAL1Q8TDZ2 1067 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 DNAJB3Q8WWF6 145 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 ERCC4Q92889 916 aaPredicted RBP7.07□□□□□ -1.28
HDAC1-205ENST00000472928 ZBTB10Q96DT7 871 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 CCDC34Q96HJ3 373 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 CDK5RAP3Q96JB5 506 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 TIGD1Q96MW7 591 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 HINFPQ9BQA5 517 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 PANK2Q9BZ23 570 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 TMX1Q9H3N1 280 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 TTC12Q9H892 705 aaPredicted RBP7.07□□□□□ -1.28
HDAC1-205ENST00000472928 LRWD1Q9UFC0 647 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 USP25Q9UHP3 1055 aa7.07□□□□□ -1.28
HDAC1-205ENST00000472928 HOOK1Q9UJC3 728 aaKnown RBP7.07□□□□□ -1.28
HDAC1-205ENST00000472928 ZNF215Q9UL58 517 aaPredicted RBP7.07□□□□□ -1.28
HDAC1-205ENST00000472928 KDM3AQ9Y4C1 1321 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 A0A087WWV3 80 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 FSD2A1L4K1 749 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 HIDE1A8MVS5 230 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 CHMP2AO43633 222 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 PI15O43692 258 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 GAS7O60861 476 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 FGF18O76093 207 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 STAU1O95793 577 aaKnown RBP7.06□□□□□ -1.28
HDAC1-205ENST00000472928 ASGR2P07307 311 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 SLFN14P0C7P3 912 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 STAG3L1P0CL83 205 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 NPR3P17342 541 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 SLC19A1P41440 591 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 CLCN5P51795 746 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 MRPS6P82932 125 aaKnown RBP7.06□□□□□ -1.28
HDAC1-205ENST00000472928 PPFIA1Q13136 1202 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 PNOCQ13519 176 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 MTMR1Q13613 665 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 NEDD9Q14511 834 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 POSTNQ15063 836 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 GRIK4Q16099 956 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 PPP1R26Q5T8A7 1209 aaPredicted RBP7.06□□□□□ -1.28
HDAC1-205ENST00000472928 LRCH2Q5VUJ6 765 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 RRAGBQ5VZM2 374 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 PLPP4Q5VZY2 271 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 KRT79Q5XKE5 535 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 HAUS3Q68CZ6 603 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 LLGL2Q6P1M3 1020 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms