RNA–Protein interactions for RNA: ENST00000472863.5

HOXB3-207, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-207ENST00000472863 MTF1Q14872 753 aa29.83■■■□□ 2.37
HOXB3-207ENST00000472863 LMBRD2Q68DH5 695 aaPredicted RBP29.83■■■□□ 2.37
HOXB3-207ENST00000472863 GJB7Q6PEY0 223 aa29.83■■■□□ 2.37
HOXB3-207ENST00000472863 CEP120Q8N960 986 aa29.83■■■□□ 2.37
HOXB3-207ENST00000472863 ZNF516Q92618 1163 aa29.83■■■□□ 2.37
HOXB3-207ENST00000472863 PDZD7Q9H5P4 517 aa29.83■■■□□ 2.37
HOXB3-207ENST00000472863 LRRC53A6NM62 1247 aa29.83■■■□□ 2.37
HOXB3-207ENST00000472863 ARHGAP6O43182 974 aa29.83■■■□□ 2.37
HOXB3-207ENST00000472863 DARSP14868 501 aaKnown RBP29.83■■■□□ 2.37
HOXB3-207ENST00000472863 UCHL3P15374 230 aa29.83■■■□□ 2.37
HOXB3-207ENST00000472863 TSR1Q2NL82 804 aaKnown RBP29.83■■■□□ 2.37
HOXB3-207ENST00000472863 E4F1Q66K89 784 aaPredicted RBP29.83■■■□□ 2.37
HOXB3-207ENST00000472863 TAF2Q6P1X5 1199 aa29.83■■■□□ 2.37
HOXB3-207ENST00000472863 USP37Q86T82 979 aa29.83■■■□□ 2.37
HOXB3-207ENST00000472863 GPIHBP1Q8IV16 184 aa29.83■■■□□ 2.37
HOXB3-207ENST00000472863 NME8Q8N427 588 aa29.83■■■□□ 2.37
HOXB3-207ENST00000472863 EHBP1Q8NDI1 1231 aa29.83■■■□□ 2.37
HOXB3-207ENST00000472863 TMEM40Q8WWA1 233 aa29.83■■■□□ 2.37
HOXB3-207ENST00000472863 NAA15Q9BXJ9 866 aaKnown RBP29.83■■■□□ 2.37
HOXB3-207ENST00000472863 INTS2Q9H0H0 1204 aaKnown RBP29.83■■■□□ 2.37
HOXB3-207ENST00000472863 FHOD1Q9Y613 1164 aa29.83■■■□□ 2.37
HOXB3-207ENST00000472863 ZNF500O60304 480 aaPredicted RBP29.82■■■□□ 2.36
HOXB3-207ENST00000472863 N4BP1O75113 896 aaKnown RBP29.82■■■□□ 2.36
HOXB3-207ENST00000472863 OSTNP61366 133 aa29.82■■■□□ 2.36
HOXB3-207ENST00000472863 ENPEPQ07075 957 aa29.82■■■□□ 2.36
HOXB3-207ENST00000472863 WNT8BQ93098 351 aa29.82■■■□□ 2.36
HOXB3-207ENST00000472863 FNBP1Q96RU3 617 aa29.82■■■□□ 2.36
HOXB3-207ENST00000472863 CPSF3Q9UKF6 684 aaKnown RBP29.82■■■□□ 2.36
HOXB3-207ENST00000472863 P4HA2O15460 535 aa29.81■■■□□ 2.36
HOXB3-207ENST00000472863 MYCP01106 439 aaPredicted RBP29.81■■■□□ 2.36
HOXB3-207ENST00000472863 EIF4BP23588 611 aaKnown RBP29.81■■■□□ 2.36
HOXB3-207ENST00000472863 CLDN10P78369 228 aa29.81■■■□□ 2.36
HOXB3-207ENST00000472863 EPC2Q52LR7 807 aa29.81■■■□□ 2.36
HOXB3-207ENST00000472863 KRT39Q6A163 491 aa29.81■■■□□ 2.36
HOXB3-207ENST00000472863 PDXDC1Q6P996 788 aa29.81■■■□□ 2.36
HOXB3-207ENST00000472863 RAD9BQ6WBX8 426 aa29.81■■■□□ 2.36
HOXB3-207ENST00000472863 SV2AQ7L0J3 742 aa29.81■■■□□ 2.36
HOXB3-207ENST00000472863 SESTD1Q86VW0 696 aa29.81■■■□□ 2.36
HOXB3-207ENST00000472863 TMEM8AQ9HCN3 771 aa29.81■■■□□ 2.36
HOXB3-207ENST00000472863 AJAP1Q9UKB5 411 aaPredicted RBP29.81■■■□□ 2.36
HOXB3-207ENST00000472863 PTPRJQ12913 1337 aa29.81■■■□□ 2.36
HOXB3-207ENST00000472863 TNNI1P19237 187 aa29.81■■■□□ 2.36
HOXB3-207ENST00000472863 SNX17Q15036 470 aa29.81■■■□□ 2.36
HOXB3-207ENST00000472863 PLAGL2Q9UPG8 496 aa29.81■■■□□ 2.36
HOXB3-207ENST00000472863 A0A1B0GUA9 196 aa29.8■■■□□ 2.36
HOXB3-207ENST00000472863 PMM2O15305 246 aa29.8■■■□□ 2.36
HOXB3-207ENST00000472863 GTF2H1P32780 548 aa29.8■■■□□ 2.36
HOXB3-207ENST00000472863 CETN1Q12798 172 aa29.8■■■□□ 2.36
HOXB3-207ENST00000472863 ITGA7Q13683 1181 aa29.8■■■□□ 2.36
HOXB3-207ENST00000472863 HSP90AA2PQ14568 343 aaPredicted RBP29.8■■■□□ 2.36
HOXB3-207ENST00000472863 MEA1Q16626 185 aa29.8■■■□□ 2.36
HOXB3-207ENST00000472863 CYP26C1Q6V0L0 522 aa29.8■■■□□ 2.36
HOXB3-207ENST00000472863 CATSPER4Q7RTX7 472 aa29.8■■■□□ 2.36
HOXB3-207ENST00000472863 TMTC1Q8IUR5 882 aa29.8■■■□□ 2.36
HOXB3-207ENST00000472863 BRSK2Q8IWQ3 736 aa29.8■■■□□ 2.36
HOXB3-207ENST00000472863 TMEM192Q8IY95 271 aa29.8■■■□□ 2.36
HOXB3-207ENST00000472863 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.8■■■□□ 2.36
HOXB3-207ENST00000472863 UNC93B1Q9H1C4 597 aa29.8■■■□□ 2.36
HOXB3-207ENST00000472863 HOXA11P31270 313 aaPredicted RBP29.79■■■□□ 2.36
HOXB3-207ENST00000472863 SERINC5Q86VE9 423 aa29.79■■■□□ 2.36
HOXB3-207ENST00000472863 SEMA4DQ92854 862 aa29.79■■■□□ 2.36
HOXB3-207ENST00000472863 USP27XA6NNY8 438 aa29.79■■■□□ 2.36
HOXB3-207ENST00000472863 HNRNPH3P31942 346 aaKnown RBP29.79■■■□□ 2.36
HOXB3-207ENST00000472863 TOGARAM2Q6ZUX3 1019 aa29.79■■■□□ 2.36
HOXB3-207ENST00000472863 DNAJC5GQ8N7S2 189 aa29.79■■■□□ 2.36
HOXB3-207ENST00000472863 FAM212AQ96EL1 285 aa29.79■■■□□ 2.36
HOXB3-207ENST00000472863 UTP3Q9NQZ2 479 aaKnown RBP eCLIP29.79■■■□□ 2.364e-7■■■■■ 165.8
HOXB3-207ENST00000472863 ZNHIT6Q9NWK9 470 aaKnown RBP29.79■■■□□ 2.36
HOXB3-207ENST00000472863 TRMT1Q9NXH9 659 aaKnown RBP29.79■■■□□ 2.36
HOXB3-207ENST00000472863 CABYRO75952 493 aa29.78■■■□□ 2.36
HOXB3-207ENST00000472863 CRYBB1P53674 252 aaPredicted RBP29.78■■■□□ 2.36
HOXB3-207ENST00000472863 IQCEQ6IPM2 695 aa29.78■■■□□ 2.36
HOXB3-207ENST00000472863 PHLDB3Q6NSJ2 640 aa29.78■■■□□ 2.36
HOXB3-207ENST00000472863 TAS1R2Q8TE23 839 aa29.78■■■□□ 2.36
HOXB3-207ENST00000472863 COQ4Q9Y3A0 265 aa29.78■■■□□ 2.36
HOXB3-207ENST00000472863 MOXD2PA6NHM9 499 aa29.77■■■□□ 2.36
HOXB3-207ENST00000472863 MCF2P10911 925 aa29.77■■■□□ 2.36
HOXB3-207ENST00000472863 KCNJ6P48051 423 aa29.77■■■□□ 2.36
HOXB3-207ENST00000472863 ENOX2Q16206 610 aaKnown RBP29.77■■■□□ 2.36
HOXB3-207ENST00000472863 PTGISQ16647 500 aa29.77■■■□□ 2.36
HOXB3-207ENST00000472863 C15orf39Q6ZRI6 1047 aa29.77■■■□□ 2.36
HOXB3-207ENST00000472863 TSEN34Q9BSV6 310 aaKnown RBP29.77■■■□□ 2.36
HOXB3-207ENST00000472863 CELF4Q9BZC1 486 aaKnown RBP29.77■■■□□ 2.36
HOXB3-207ENST00000472863 FBXL5Q9UKA1 691 aa29.77■■■□□ 2.36
HOXB3-207ENST00000472863 GLT1D1Q96MS3 346 aa29.77■■■□□ 2.36
HOXB3-207ENST00000472863 APEX2Q9UBZ4 518 aa29.77■■■□□ 2.36
HOXB3-207ENST00000472863 C4BPAP04003 597 aaKnown RBP29.76■■■□□ 2.35
HOXB3-207ENST00000472863 MRPS6P82932 125 aaKnown RBP29.76■■■□□ 2.35
HOXB3-207ENST00000472863 RAPGEF1Q13905 1077 aa29.76■■■□□ 2.35
HOXB3-207ENST00000472863 MTFR1Q15390 333 aa29.76■■■□□ 2.35
HOXB3-207ENST00000472863 CCAR2Q8N163 923 aaKnown RBP29.76■■■□□ 2.35
HOXB3-207ENST00000472863 OR5B17Q8NGF7 314 aa29.76■■■□□ 2.35
HOXB3-207ENST00000472863 CGRRF1Q99675 332 aa29.76■■■□□ 2.35
HOXB3-207ENST00000472863 DESI2Q9BSY9 194 aa29.76■■■□□ 2.35
HOXB3-207ENST00000472863 TRMT13Q9NUP7 481 aaKnown RBP29.76■■■□□ 2.35
HOXB3-207ENST00000472863 DNAJC12Q9UKB3 198 aa29.76■■■□□ 2.35
HOXB3-207ENST00000472863 PLEKP08567 350 aaPredicted RBP29.75■■■□□ 2.35
HOXB3-207ENST00000472863 STAG3L1P0CL83 205 aa29.75■■■□□ 2.35
HOXB3-207ENST00000472863 ARRDC4Q8NCT1 418 aa29.75■■■□□ 2.35
HOXB3-207ENST00000472863 FBXL13Q8NEE6 735 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms