RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 FAM178BQ8IXR5 827 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 EFHBQ8N7U6 833 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 CEP120Q8N960 986 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 KCNG4Q8TDN1 519 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 KCNN1Q92952 543 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 FIZ1Q96SL8 496 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 CDCA3Q99618 268 aaPredicted RBP10.04□□□□□ -0.8
SYN3-211ENST00000472027 COLEC11Q9BWP8 271 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 ZBP1Q9H171 429 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 CDT1Q9H211 546 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 MARCH5Q9NX47 278 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 RCOR1Q9UKL0 485 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 TBX20Q9UMR3 447 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 PCDHA7Q9UN72 937 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 PRG3Q9Y2Y8 225 aaPredicted RBP10.04□□□□□ -0.8
SYN3-211ENST00000472027 PLXNA4Q9HCM2 1894 aa10.04□□□□□ -0.8
SYN3-211ENST00000472027 ZMYM2Q9UBW7 1377 aa10.03□□□□□ -0.8
SYN3-211ENST00000472027 C2orf71A6NGG8 1288 aa10.03□□□□□ -0.8
SYN3-211ENST00000472027 K7ENM7 598 aa10.03□□□□□ -0.8
SYN3-211ENST00000472027 CTSAP10619 480 aa10.03□□□□□ -0.8
SYN3-211ENST00000472027 SCP2P22307 547 aa10.03□□□□□ -0.8
SYN3-211ENST00000472027 NMT1P30419 496 aaKnown RBP10.03□□□□□ -0.8
SYN3-211ENST00000472027 CA8P35219 290 aa10.03□□□□□ -0.8
SYN3-211ENST00000472027 ME1P48163 572 aa10.03□□□□□ -0.8
SYN3-211ENST00000472027 NDUFV1P49821 464 aa10.03□□□□□ -0.8
SYN3-211ENST00000472027 OSTNP61366 133 aa10.03□□□□□ -0.8
SYN3-211ENST00000472027 GTF2BQ00403 316 aa10.03□□□□□ -0.8
SYN3-211ENST00000472027 ALKAL1Q6UXT8 129 aa10.03□□□□□ -0.8
SYN3-211ENST00000472027 ZPBP2Q6X784 338 aa10.03□□□□□ -0.8
SYN3-211ENST00000472027 TAS1R1Q7RTX1 841 aa10.03□□□□□ -0.8
SYN3-211ENST00000472027 AUTS2Q8WXX7 1259 aa10.03□□□□□ -0.8
SYN3-211ENST00000472027 RABGGTAQ92696 567 aa10.03□□□□□ -0.8
SYN3-211ENST00000472027 STAMQ92783 540 aa10.03□□□□□ -0.8
SYN3-211ENST00000472027 DNAJC19Q96DA6 116 aa10.03□□□□□ -0.8
SYN3-211ENST00000472027 ACAP3Q96P50 834 aa10.03□□□□□ -0.8
SYN3-211ENST00000472027 CCDC94Q9BW85 323 aaPredicted RBP10.03□□□□□ -0.8
SYN3-211ENST00000472027 VN1R3Q9BXE9 311 aa10.03□□□□□ -0.8
SYN3-211ENST00000472027 CACNG4Q9UBN1 327 aa10.03□□□□□ -0.8
SYN3-211ENST00000472027 STK39Q9UEW8 545 aa10.03□□□□□ -0.8
SYN3-211ENST00000472027 GRXCR2A6NFK2 248 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 CASTOR2A6NHX0 329 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 F8W810 466 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 CLDN3O15551 220 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 TBX10O75333 385 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 GLP2RO95838 553 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 EFEMP2O95967 443 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 SOD2P04179 222 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 HARSP12081 509 aaKnown RBP10.02□□□□□ -0.81
SYN3-211ENST00000472027 ABCD1P33897 745 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 MATR3P43243 847 aaKnown RBP eCLIP10.02□□□□□ -0.81
SYN3-211ENST00000472027 YARSP54577 528 aaKnown RBP10.02□□□□□ -0.81
SYN3-211ENST00000472027 RBM10P98175 930 aaKnown RBP10.02□□□□□ -0.81
SYN3-211ENST00000472027 MCL1Q07820 350 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 TUSC3Q13454 348 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 KCNC3Q14003 757 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 NAB2Q15742 525 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 CLUL1Q15846 466 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 E2F4Q16254 413 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 PUS10Q3MIT2 529 aaKnown RBP10.02□□□□□ -0.81
SYN3-211ENST00000472027 SEZ6Q53EL9 994 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 ZC2HC1CQ53FD0 456 aaPredicted RBP10.02□□□□□ -0.81
SYN3-211ENST00000472027 XKR4Q5GH76 650 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 PTCRAQ6ISU1 281 aaPredicted RBP10.02□□□□□ -0.81
SYN3-211ENST00000472027 TMEM184AQ6ZMB5 413 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 ZNF720Q7Z2F6 126 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 SFR1Q86XK3 245 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 IQUBQ8NA54 791 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 VN1R2Q8NFZ6 395 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 ADAMTS19Q8TE59 1207 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 DHX58Q96C10 678 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 BICD1Q96G01 975 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 CHAMP1Q96JM3 812 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 PAAF1Q9BRP4 392 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 HAPLN2Q9GZV7 340 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 CUEDC2Q9H467 287 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 ST6GALNAC4Q9H4F1 302 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 FAM13BQ9NYF5 915 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 CLEC1BQ9P126 229 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 ANKFY1Q9P2R3 1169 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 SEL1LQ9UBV2 794 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 IRAK3Q9Y616 596 aa10.02□□□□□ -0.81
SYN3-211ENST00000472027 SPTBN5Q9NRC6 3674 aaKnown RBP10.02□□□□□ -0.81
SYN3-211ENST00000472027 SMIM28A0A1B0GU29 152 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.01□□□□□ -0.81
SYN3-211ENST00000472027 FSD2A1L4K1 749 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 POLR2DO15514 142 aaKnown RBP10.01□□□□□ -0.81
SYN3-211ENST00000472027 LILRB3O75022 631 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 CLASP2O75122 1294 aaKnown RBP10.01□□□□□ -0.81
SYN3-211ENST00000472027 TADA2AO75478 443 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 PIGRP01833 764 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 IDEP14735 1019 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 IL9P15248 144 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 GAP43P17677 238 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 HOXD11P31277 338 aaPredicted RBP10.01□□□□□ -0.81
SYN3-211ENST00000472027 LIG4P49917 911 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 KRT85P78386 507 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 HSP90AA2PQ14568 343 aaPredicted RBP10.01□□□□□ -0.81
SYN3-211ENST00000472027 NOLC1Q14978 699 aaKnown RBP eCLIP10.01□□□□□ -0.81
SYN3-211ENST00000472027 PTPN14Q15678 1187 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 HERC4Q5GLZ8 1057 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms