RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 CWH43Q9H720 699 aa16.52■□□□□ 0.24
SNX13-205ENST00000471744 TBC1D13Q9NVG8 400 aa16.52■□□□□ 0.24
SNX13-205ENST00000471744 SNTG2Q9NY99 539 aa16.52■□□□□ 0.24
SNX13-205ENST00000471744 STYXL1Q9Y6J8 313 aa16.52■□□□□ 0.24
SNX13-205ENST00000471744 PDCD11Q14690 1871 aaKnown RBP16.51■□□□□ 0.23
SNX13-205ENST00000471744 COL4A4P53420 1690 aaPredicted RBP16.51■□□□□ 0.23
SNX13-205ENST00000471744 A0A0B4J269 797 aa16.51■□□□□ 0.23
SNX13-205ENST00000471744 OGTO15294 1046 aa16.51■□□□□ 0.23
SNX13-205ENST00000471744 PRPF40AO75400 957 aaKnown RBP16.51■□□□□ 0.23
SNX13-205ENST00000471744 NR1I2O75469 434 aa16.51■□□□□ 0.23
SNX13-205ENST00000471744 RHOBTB3O94955 611 aa16.51■□□□□ 0.23
SNX13-205ENST00000471744 KIF20AO95235 890 aa16.51■□□□□ 0.23
SNX13-205ENST00000471744 SMC2O95347 1197 aa16.51■□□□□ 0.23
SNX13-205ENST00000471744 CASP5P51878 434 aa16.51■□□□□ 0.23
SNX13-205ENST00000471744 SNRPFP62306 86 aaKnown RBP16.51■□□□□ 0.23
SNX13-205ENST00000471744 GRIK3Q13003 919 aa16.51■□□□□ 0.23
SNX13-205ENST00000471744 KCNB1Q14721 858 aa16.51■□□□□ 0.23
SNX13-205ENST00000471744 KMT5BQ4FZB7 885 aa16.51■□□□□ 0.23
SNX13-205ENST00000471744 LRRC55Q6ZSA7 311 aa16.51■□□□□ 0.23
SNX13-205ENST00000471744 EPM2AIP1Q7L775 607 aaPredicted RBP16.51■□□□□ 0.23
SNX13-205ENST00000471744 THNSL1Q8IYQ7 743 aa16.51■□□□□ 0.23
SNX13-205ENST00000471744 COLGALT1Q8NBJ5 622 aa16.51■□□□□ 0.23
SNX13-205ENST00000471744 ZNF507Q8TCN5 953 aa16.51■□□□□ 0.23
SNX13-205ENST00000471744 GTPBP4Q9BZE4 634 aaKnown RBP16.51■□□□□ 0.23
SNX13-205ENST00000471744 PRDM12Q9H4Q4 367 aa16.51■□□□□ 0.23
SNX13-205ENST00000471744 CERS4Q9HA82 394 aa16.51■□□□□ 0.23
SNX13-205ENST00000471744 RMND1Q9NWS8 449 aa16.51■□□□□ 0.23
SNX13-205ENST00000471744 MTUS1Q9ULD2 1270 aa16.51■□□□□ 0.23
SNX13-205ENST00000471744 GDAQ9Y2T3 454 aa16.51■□□□□ 0.23
SNX13-205ENST00000471744 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.51■□□□□ 0.23
SNX13-205ENST00000471744 LAMA2P24043 3122 aaKnown RBP16.51■□□□□ 0.23
SNX13-205ENST00000471744 PRRC2BQ5JSZ5 2229 aaKnown RBP16.5■□□□□ 0.23
SNX13-205ENST00000471744 H3BNC9 293 aa16.5■□□□□ 0.23
SNX13-205ENST00000471744 KIAA0391O15091 583 aaKnown RBP16.5■□□□□ 0.23
SNX13-205ENST00000471744 PRPF6O94906 941 aaKnown RBP16.5■□□□□ 0.23
SNX13-205ENST00000471744 CLTAP09496 248 aa16.5■□□□□ 0.23
SNX13-205ENST00000471744 HARSP12081 509 aaKnown RBP16.5■□□□□ 0.23
SNX13-205ENST00000471744 GARTP22102 1010 aa16.5■□□□□ 0.23
SNX13-205ENST00000471744 ALDH7A1P49419 539 aaKnown RBP16.5■□□□□ 0.23
SNX13-205ENST00000471744 POU5F1Q01860 360 aaKnown RBP16.5■□□□□ 0.23
SNX13-205ENST00000471744 HSP90AA2PQ14568 343 aaPredicted RBP16.5■□□□□ 0.23
SNX13-205ENST00000471744 BMT2Q1RMZ1 405 aa16.5■□□□□ 0.23
SNX13-205ENST00000471744 SLC39A4Q6P5W5 647 aa16.5■□□□□ 0.23
SNX13-205ENST00000471744 KCNT2Q6UVM3 1135 aa16.5■□□□□ 0.23
SNX13-205ENST00000471744 GSDMAQ96QA5 445 aa16.5■□□□□ 0.23
SNX13-205ENST00000471744 CDX2Q99626 313 aaPredicted RBP16.5■□□□□ 0.23
SNX13-205ENST00000471744 TMEM175Q9BSA9 504 aa16.5■□□□□ 0.23
SNX13-205ENST00000471744 MSTO1Q9BUK6 570 aa16.5■□□□□ 0.23
SNX13-205ENST00000471744 GBP3Q9H0R5 595 aa16.5■□□□□ 0.23
SNX13-205ENST00000471744 LMAN2LQ9H0V9 348 aa16.5■□□□□ 0.23
SNX13-205ENST00000471744 PLEKHA5Q9HAU0 1116 aa16.5■□□□□ 0.23
SNX13-205ENST00000471744 SLC39A2Q9NP94 309 aa16.5■□□□□ 0.23
SNX13-205ENST00000471744 LMCD1Q9NZU5 365 aa16.5■□□□□ 0.23
SNX13-205ENST00000471744 CGNQ9P2M7 1197 aaKnown RBP16.5■□□□□ 0.23
SNX13-205ENST00000471744 MYO7AQ13402 2215 aa16.5■□□□□ 0.23
SNX13-205ENST00000471744 ZC3H11AO75152 810 aaKnown RBP eCLIP16.49■□□□□ 0.23
SNX13-205ENST00000471744 LDHAP00338 332 aaKnown RBP16.49■□□□□ 0.23
SNX13-205ENST00000471744 POMCP01189 267 aa16.49■□□□□ 0.23
SNX13-205ENST00000471744 THP07101 528 aa16.49■□□□□ 0.23
SNX13-205ENST00000471744 PRR29P0C7W0 189 aa16.49■□□□□ 0.23
SNX13-205ENST00000471744 SCNN1GP51170 649 aa16.49■□□□□ 0.23
SNX13-205ENST00000471744 UBE3AQ05086 875 aa16.49■□□□□ 0.23
SNX13-205ENST00000471744 KCNA1Q09470 495 aa16.49■□□□□ 0.23
SNX13-205ENST00000471744 GPM6BQ13491 265 aa16.49■□□□□ 0.23
SNX13-205ENST00000471744 PTPROQ16827 1216 aa16.49■□□□□ 0.23
SNX13-205ENST00000471744 SPRED2Q7Z698 418 aa16.49■□□□□ 0.23
SNX13-205ENST00000471744 CEP120Q8N960 986 aa16.49■□□□□ 0.23
SNX13-205ENST00000471744 POMGNT1Q8WZA1 660 aa16.49■□□□□ 0.23
SNX13-205ENST00000471744 HPS3Q969F9 1004 aa16.49■□□□□ 0.23
SNX13-205ENST00000471744 ZFP42Q96MM3 310 aa16.49■□□□□ 0.23
SNX13-205ENST00000471744 GUCD1Q96NT3 240 aa16.49■□□□□ 0.23
SNX13-205ENST00000471744 TSPAN18Q96SJ8 248 aa16.49■□□□□ 0.23
SNX13-205ENST00000471744 FGFBP2Q9BYJ0 223 aa16.49■□□□□ 0.23
SNX13-205ENST00000471744 NRDE2Q9H7Z3 1164 aa16.49■□□□□ 0.23
SNX13-205ENST00000471744 KLK14Q9P0G3 267 aa16.49■□□□□ 0.23
SNX13-205ENST00000471744 STK39Q9UEW8 545 aa16.49■□□□□ 0.23
SNX13-205ENST00000471744 AGO2Q9UKV8 859 aaKnown RBP16.49■□□□□ 0.23
SNX13-205ENST00000471744 ANKRD63C9JTQ0 380 aa16.48■□□□□ 0.23
SNX13-205ENST00000471744 POU3F3P20264 500 aaPredicted RBP16.48■□□□□ 0.23
SNX13-205ENST00000471744 BCAR1P56945 870 aa16.48■□□□□ 0.23
SNX13-205ENST00000471744 OSTNP61366 133 aa16.48■□□□□ 0.23
SNX13-205ENST00000471744 DSC1Q08554 894 aa16.48■□□□□ 0.23
SNX13-205ENST00000471744 PNOCQ13519 176 aa16.48■□□□□ 0.23
SNX13-205ENST00000471744 XKR4Q5GH76 650 aa16.48■□□□□ 0.23
SNX13-205ENST00000471744 HS2ST1Q7LGA3 356 aa16.48■□□□□ 0.23
SNX13-205ENST00000471744 CD302Q8IX05 232 aa16.48■□□□□ 0.23
SNX13-205ENST00000471744 GSTCDQ8NEC7 633 aa16.48■□□□□ 0.23
SNX13-205ENST00000471744 GOLGA5Q8TBA6 731 aa16.48■□□□□ 0.23
SNX13-205ENST00000471744 SCFD1Q8WVM8 642 aa16.48■□□□□ 0.23
SNX13-205ENST00000471744 SMARCE1Q969G3 411 aa16.48■□□□□ 0.23
SNX13-205ENST00000471744 SNX27Q96L92 541 aa16.48■□□□□ 0.23
SNX13-205ENST00000471744 RPF1Q9H9Y2 349 aaKnown RBP16.48■□□□□ 0.23
SNX13-205ENST00000471744 SLC38A7Q9NVC3 462 aa16.48■□□□□ 0.23
SNX13-205ENST00000471744 SPG21Q9NZD8 308 aa16.48■□□□□ 0.23
SNX13-205ENST00000471744 LZTS1Q9Y250 596 aa16.48■□□□□ 0.23
SNX13-205ENST00000471744 PLXNA4Q9HCM2 1894 aa16.48■□□□□ 0.23
SNX13-205ENST00000471744 EPOPA6NHQ4 379 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 ALDH2P05091 517 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 KCNE1P15382 129 aa16.47■□□□□ 0.23
SNX13-205ENST00000471744 FOSL2P15408 326 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms