RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 TRIM69Q86WT6 500 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 UNC5CLQ8IV45 518 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ELP3Q9H9T3 547 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SH3BP1Q9Y3L3 701 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 FAM32AQ9Y421 112 aaKnown RBP13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PPP6R2O75170 966 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 MMEP08473 750 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 DDX5P17844 614 aaKnown RBP13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 OR1G1P47890 313 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ARHGEF25Q86VW2 580 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 BLMP54132 1417 aaPredicted RBP13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PCYT1AP49585 367 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 GFPT1Q06210 699 aaPredicted RBP13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PDAP1Q13442 181 aaKnown RBP13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 MRFAP1L1Q96HT8 127 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 RERGLQ9H628 205 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ZNF229Q9UJW7 825 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PYCARDQ9ULZ3 195 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PYGBP11216 843 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 RGS7P49802 495 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 MTM1Q13496 603 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ZMYM1Q5SVZ6 1142 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 TTC23Q5W5X9 447 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 MCPH1Q8NEM0 835 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 FAM161BQ96MY7 647 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 MYLK2Q9H1R3 596 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 BCAR1P56945 870 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 MRPS15P82914 257 aaKnown RBP13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 UTP6Q9NYH9 597 aaKnown RBP13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 RWDD2AQ9UIY3 292 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 V9GYQ6 96 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 CITO14578 2027 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 POTECB2RU33 542 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 FAM47E-STBD1D6RA91 191 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ERN1O75460 977 aaKnown RBP13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 KPNA1P52294 538 aaPredicted RBP13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PNKPQ96T60 521 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 YY1AP1Q9H869 796 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 LZTS1Q9Y250 596 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 TFRCP02786 760 aaKnown RBP13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 APRTP07741 180 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 NCALDP61601 193 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ALKBH2Q6NS38 261 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ZNF614Q8N883 585 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 XXYLT1Q8NBI6 393 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 RNF149Q8NC42 400 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ERLEC1Q96DZ1 483 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PLAAQ9Y263 795 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 WEE1P30291 646 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ROR1Q01973 937 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 TBC1D9BQ66K14 1250 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 TBC1D19Q8N5T2 526 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 NSUN6Q8TEA1 469 aaKnown RBP13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 JADE3Q92613 823 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 RABGGTAQ92696 567 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 TMEM245Q9H330 911 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 GPATCH8Q9UKJ3 1502 aaKnown RBP13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ALDH1A2O94788 518 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PRELPP51888 382 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PRAMEF18Q5VWM3 479 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SFR1Q86XK3 245 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 HES6Q96HZ4 224 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 COA1Q9GZY4 146 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 DIABLOQ9NR28 239 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ZFP69BQ9UJL9 534 aa13.97□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SNTNA6NMZ2 147 aa13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 GRAP2O75791 330 aa13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 VAMP7P51809 220 aa13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 TPI1P60174 286 aa13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SNX30Q5VWJ9 437 aa13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 GPBP1L1Q9HC44 474 aaPredicted RBP13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 TRIM49BA6NDI0 452 aa13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 KCNN4O15554 427 aa13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 IFNEQ86WN2 208 aa13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 DGKHQ86XP1 1220 aa13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PAGE5Q96GU1 130 aa13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 TUBB6Q9BUF5 446 aa13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 REXO4Q9GZR2 422 aaKnown RBP13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 MTIF3Q9H2K0 278 aaKnown RBP13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 KLF15Q9UIH9 416 aa13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 KDM5AP29375 1690 aaKnown RBP13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 EN1Q05925 392 aaPredicted RBP13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 LRRC14Q15048 493 aa13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 VN1R5Q7Z5H4 357 aa13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 GSPT2Q8IYD1 628 aaKnown RBP13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SSH3Q8TE77 659 aa13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ZNF608Q9ULD9 1512 aaPredicted RBP13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 CYP2B6P20813 491 aa13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 HSD17B4P51659 736 aa13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ADCY2Q08462 1091 aa13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 OSBP2Q969R2 916 aa13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 RBM41Q96IZ5 413 aaKnown RBP13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 H2AFY2Q9P0M6 372 aaPredicted RBP13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 LSM7Q9UK45 103 aaKnown RBP13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ARAP3Q8WWN8 1544 aa13.96□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 HIST1H2AGP0C0S8 130 aaPredicted RBP13.96□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 DARSP14868 501 aaKnown RBP13.96□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 HIST1H2ADP20671 130 aa13.96□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ETFBP38117 255 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms