RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 CHST2Q9Y4C5 530 aa4.88□□□□□ -1.63
PRPF40A-207ENST00000471701 FPGT-TNNI3KV9GXZ4 949 aa4.88□□□□□ -1.63
PRPF40A-207ENST00000471701 PIPSLA2A3N6 862 aa4.87□□□□□ -1.63
PRPF40A-207ENST00000471701 GSG1L2A8MUP6 293 aa4.87□□□□□ -1.63
PRPF40A-207ENST00000471701 AKR1B10O60218 316 aa4.87□□□□□ -1.63
PRPF40A-207ENST00000471701 TMEM127O75204 238 aa4.87□□□□□ -1.63
PRPF40A-207ENST00000471701 DDX6P26196 483 aaKnown RBP eCLIP4.87□□□□□ -1.63
PRPF40A-207ENST00000471701 FLT3LGP49771 235 aa4.87□□□□□ -1.63
PRPF40A-207ENST00000471701 SESN3P58005 492 aa4.87□□□□□ -1.63
PRPF40A-207ENST00000471701 CLRN1P58418 232 aa4.87□□□□□ -1.63
PRPF40A-207ENST00000471701 CDK17Q00537 523 aa4.87□□□□□ -1.63
PRPF40A-207ENST00000471701 RESTQ13127 1097 aa4.87□□□□□ -1.63
PRPF40A-207ENST00000471701 PDCD1Q15116 288 aa4.87□□□□□ -1.63
PRPF40A-207ENST00000471701 DHCR24Q15392 516 aa4.87□□□□□ -1.63
PRPF40A-207ENST00000471701 FSCN1Q16658 493 aaKnown RBP4.87□□□□□ -1.63
PRPF40A-207ENST00000471701 ATXN7L2Q5T6C5 722 aaPredicted RBP4.87□□□□□ -1.63
PRPF40A-207ENST00000471701 ABHD17BQ5VST6 288 aa4.87□□□□□ -1.63
PRPF40A-207ENST00000471701 HDGFL2Q7Z4V5 671 aaPredicted RBP4.87□□□□□ -1.63
PRPF40A-207ENST00000471701 KIAA0907Q7Z7F0 614 aaPredicted RBP4.87□□□□□ -1.63
PRPF40A-207ENST00000471701 RNF169Q8NCN4 708 aa4.87□□□□□ -1.63
PRPF40A-207ENST00000471701 COQ10AQ96MF6 247 aa4.87□□□□□ -1.63
PRPF40A-207ENST00000471701 TEX101Q9BY14 249 aa4.87□□□□□ -1.63
PRPF40A-207ENST00000471701 REXO4Q9GZR2 422 aaKnown RBP4.87□□□□□ -1.63
PRPF40A-207ENST00000471701 DPP7Q9UHL4 492 aa4.87□□□□□ -1.63
PRPF40A-207ENST00000471701 POLR2AP24928 1970 aaKnown RBP4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 A0A087X0B3 334 aa4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 UNC119BA6NIH7 251 aa4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 DRGXA6NNA5 263 aa4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 GOLGA8AA7E2F4 631 aa4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 PJA2O43164 708 aa4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 BPIP17213 487 aa4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 PER3P56645 1201 aa4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 BLOC1S1P78537 153 aa4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 MRPS21P82921 87 aaKnown RBP4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 CSRP2Q16527 193 aa4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 CCDC142Q17RM4 750 aa4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 MFSD14BQ5SR56 506 aa4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 PRAMEF14Q5SWL7 426 aa4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 GJC2Q5T442 439 aaPredicted RBP4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 FAM102AQ5T9C2 384 aaPredicted RBP4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 ARMC6Q6NXE6 501 aa4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 BTNL9Q6UXG8 535 aa4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 GPR156Q8NFN8 814 aa4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 RIN2Q8WYP3 895 aaPredicted RBP4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 FATE1Q969F0 183 aa4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 CEP95Q96GE4 821 aa4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 TOPORSQ9NS56 1045 aaPredicted RBP4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 DKK2Q9UBU2 259 aa4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 EDARQ9UNE0 448 aa4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 MAP3K2Q9Y2U5 619 aa4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 EPN1Q9Y6I3 576 aaPredicted RBP4.86□□□□□ -1.63
PRPF40A-207ENST00000471701 SNRPA1P09661 255 aaKnown RBP4.85□□□□□ -1.63
PRPF40A-207ENST00000471701 ENPP1P22413 925 aa4.85□□□□□ -1.63
PRPF40A-207ENST00000471701 CD38P28907 300 aa4.85□□□□□ -1.63
PRPF40A-207ENST00000471701 CHN2P52757 468 aa4.85□□□□□ -1.63
PRPF40A-207ENST00000471701 GYS2P54840 703 aa4.85□□□□□ -1.63
PRPF40A-207ENST00000471701 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.85□□□□□ -1.63
PRPF40A-207ENST00000471701 RRP12Q5JTH9 1297 aaKnown RBP4.85□□□□□ -1.63
PRPF40A-207ENST00000471701 TSHZ3Q63HK5 1081 aa4.85□□□□□ -1.63
PRPF40A-207ENST00000471701 JAZF1Q86VZ6 243 aa4.85□□□□□ -1.63
PRPF40A-207ENST00000471701 ADGRG3Q86Y34 549 aa4.85□□□□□ -1.63
PRPF40A-207ENST00000471701 UHRF1Q96T88 793 aaPredicted RBP4.85□□□□□ -1.63
PRPF40A-207ENST00000471701 SYNPO2LQ9H987 977 aa4.85□□□□□ -1.63
PRPF40A-207ENST00000471701 ZBTB21Q9ULJ3 1066 aa4.85□□□□□ -1.63
PRPF40A-207ENST00000471701 NOX1Q9Y5S8 564 aa4.85□□□□□ -1.63
PRPF40A-207ENST00000471701 COL11A2P13942 1736 aaPredicted RBP4.85□□□□□ -1.63
PRPF40A-207ENST00000471701 MASP2O00187 686 aa4.84□□□□□ -1.63
PRPF40A-207ENST00000471701 NEMP1O14524 444 aa4.84□□□□□ -1.63
PRPF40A-207ENST00000471701 FOSP01100 380 aaPredicted RBP4.84□□□□□ -1.63
PRPF40A-207ENST00000471701 MTHFD2P13995 350 aa4.84□□□□□ -1.63
PRPF40A-207ENST00000471701 CXCR5P32302 372 aa4.84□□□□□ -1.63
PRPF40A-207ENST00000471701 SEC24CP53992 1094 aa4.84□□□□□ -1.63
PRPF40A-207ENST00000471701 RAP2BP61225 183 aa4.84□□□□□ -1.63
PRPF40A-207ENST00000471701 STRN3Q13033 797 aa4.84□□□□□ -1.63
PRPF40A-207ENST00000471701 TP53BP2Q13625 1128 aa4.84□□□□□ -1.63
PRPF40A-207ENST00000471701 SYCE2Q6PIF2 218 aa4.84□□□□□ -1.63
PRPF40A-207ENST00000471701 MED25Q71SY5 747 aa4.84□□□□□ -1.63
PRPF40A-207ENST00000471701 REPS2Q8NFH8 660 aa4.84□□□□□ -1.63
PRPF40A-207ENST00000471701 SLC35B2Q8TB61 432 aa4.84□□□□□ -1.63
PRPF40A-207ENST00000471701 AUTS2Q8WXX7 1259 aa4.84□□□□□ -1.63
PRPF40A-207ENST00000471701 VOPP1Q96AW1 172 aa4.84□□□□□ -1.63
PRPF40A-207ENST00000471701 SLKQ9H2G2 1235 aaPredicted RBP4.84□□□□□ -1.63
PRPF40A-207ENST00000471701 BCO1Q9HAY6 547 aa4.84□□□□□ -1.63
PRPF40A-207ENST00000471701 SYBUQ9NX95 663 aa4.84□□□□□ -1.63
PRPF40A-207ENST00000471701 TESQ9UGI8 421 aaKnown RBP4.84□□□□□ -1.63
PRPF40A-207ENST00000471701 INSL6Q9Y581 213 aa4.84□□□□□ -1.63
PRPF40A-207ENST00000471701 CXorf49A8MYA2 514 aaPredicted RBP4.83□□□□□ -1.64
PRPF40A-207ENST00000471701 POMCP01189 267 aa4.83□□□□□ -1.64
PRPF40A-207ENST00000471701 ITGAMP11215 1152 aa4.83□□□□□ -1.64
PRPF40A-207ENST00000471701 IL2RBP14784 551 aa4.83□□□□□ -1.64
PRPF40A-207ENST00000471701 ECHS1P30084 290 aa4.83□□□□□ -1.64
PRPF40A-207ENST00000471701 ID4P47928 161 aa4.83□□□□□ -1.64
PRPF40A-207ENST00000471701 CCT2P78371 535 aaKnown RBP4.83□□□□□ -1.64
PRPF40A-207ENST00000471701 MRPS9P82933 396 aaKnown RBP4.83□□□□□ -1.64
PRPF40A-207ENST00000471701 KRTAP1-1Q07627 177 aa4.83□□□□□ -1.64
PRPF40A-207ENST00000471701 FAPQ12884 760 aa4.83□□□□□ -1.64
PRPF40A-207ENST00000471701 MUM1L1Q5H9M0 696 aa4.83□□□□□ -1.64
PRPF40A-207ENST00000471701 METRNLQ641Q3 311 aa4.83□□□□□ -1.64
PRPF40A-207ENST00000471701 ZNF572Q7Z3I7 529 aaPredicted RBP4.83□□□□□ -1.64
PRPF40A-207ENST00000471701 PRIMA1Q86XR5 153 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms