RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 ANO5Q75V66 913 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 ZNF280BQ86YH2 543 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 KSR1Q8IVT5 923 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 ADSSL1Q8N142 457 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 DTWD2Q8NBA8 298 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 PRPF31Q8WWY3 499 aaKnown RBP10.17□□□□□ -0.78
CPSF4-211ENST00000471455 RPS6KC1Q96S38 1066 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 SH2D3AQ9BRG2 576 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 VN1R3Q9BXE9 311 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 TRIM6Q9C030 488 aaPredicted RBP10.17□□□□□ -0.78
CPSF4-211ENST00000471455 IFT122Q9HBG6 1241 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.17□□□□□ -0.78
CPSF4-211ENST00000471455 WNT16Q9UBV4 365 aa10.17□□□□□ -0.78
CPSF4-211ENST00000471455 MEIS3P2A8K0S8 358 aa10.16□□□□□ -0.78
CPSF4-211ENST00000471455 C2CD2LO14523 706 aa10.16□□□□□ -0.78
CPSF4-211ENST00000471455 NRP1O14786 923 aa10.16□□□□□ -0.78
CPSF4-211ENST00000471455 TBX3O15119 743 aa10.16□□□□□ -0.78
CPSF4-211ENST00000471455 INPPL1O15357 1258 aa10.16□□□□□ -0.78
CPSF4-211ENST00000471455 GDF9O60383 454 aa10.16□□□□□ -0.78
CPSF4-211ENST00000471455 POMCP01189 267 aa10.16□□□□□ -0.78
CPSF4-211ENST00000471455 OR1G1P47890 313 aa10.16□□□□□ -0.78
CPSF4-211ENST00000471455 ID4P47928 161 aa10.16□□□□□ -0.78
CPSF4-211ENST00000471455 LAMTOR4Q0VGL1 99 aa10.16□□□□□ -0.78
CPSF4-211ENST00000471455 MXD4Q14582 209 aaPredicted RBP10.16□□□□□ -0.78
CPSF4-211ENST00000471455 EMC2Q15006 297 aa10.16□□□□□ -0.78
CPSF4-211ENST00000471455 KANK3Q6NY19 840 aa10.16□□□□□ -0.78
CPSF4-211ENST00000471455 NEK8Q86SG6 692 aa10.16□□□□□ -0.78
CPSF4-211ENST00000471455 C4orf19Q8IY42 314 aa10.16□□□□□ -0.78
CPSF4-211ENST00000471455 GPR65Q8IYL9 337 aa10.16□□□□□ -0.78
CPSF4-211ENST00000471455 RNF149Q8NC42 400 aa10.16□□□□□ -0.78
CPSF4-211ENST00000471455 KCNG4Q8TDN1 519 aa10.16□□□□□ -0.78
CPSF4-211ENST00000471455 SMG7Q92540 1137 aaKnown RBP10.16□□□□□ -0.78
CPSF4-211ENST00000471455 GJA10Q969M2 543 aa10.16□□□□□ -0.78
CPSF4-211ENST00000471455 CCDC43Q96MW1 224 aaKnown RBP10.16□□□□□ -0.78
CPSF4-211ENST00000471455 COLEC11Q9BWP8 271 aa10.16□□□□□ -0.78
CPSF4-211ENST00000471455 PLEKHA4Q9H4M7 779 aa10.16□□□□□ -0.78
CPSF4-211ENST00000471455 DHX33Q9H6R0 707 aaKnown RBP10.16□□□□□ -0.78
CPSF4-211ENST00000471455 PIDD1Q9HB75 910 aa10.16□□□□□ -0.78
CPSF4-211ENST00000471455 NCOA5Q9HCD5 579 aaKnown RBP10.16□□□□□ -0.78
CPSF4-211ENST00000471455 WDR6Q9NNW5 1121 aaKnown RBP10.16□□□□□ -0.78
CPSF4-211ENST00000471455 ZDHHC7Q9NXF8 308 aa10.16□□□□□ -0.78
CPSF4-211ENST00000471455 EPS15L1Q9UBC2 864 aa10.16□□□□□ -0.78
CPSF4-211ENST00000471455 PRG3Q9Y2Y8 225 aaPredicted RBP10.16□□□□□ -0.78
CPSF4-211ENST00000471455 ZMYM2Q9UBW7 1377 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 EP300Q09472 2414 aaPredicted RBP10.15□□□□□ -0.78
CPSF4-211ENST00000471455 CCDC195A0A1B0GUA6 201 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 TEX28O15482 410 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 EPB41L2O43491 1005 aaKnown RBP10.15□□□□□ -0.78
CPSF4-211ENST00000471455 EDIL3O43854 480 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 LILRB3O75022 631 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 DDHD2O94830 711 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 BAG4O95429 457 aaKnown RBP10.15□□□□□ -0.78
CPSF4-211ENST00000471455 SRFP11831 508 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 NPR3P17342 541 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 YWHABP31946 246 aaKnown RBP10.15□□□□□ -0.78
CPSF4-211ENST00000471455 NPEPPSP55786 919 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 DSG1Q02413 1049 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 EPHA7Q15375 998 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 INF2Q27J81 1249 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 TUSC1Q2TAM9 212 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 PPP4R3AQ6IN85 833 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 FERMT3Q86UX7 667 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 COLGALT2Q8IYK4 626 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 SLFN12Q8IYM2 578 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 PRR7Q8TB68 274 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 TMEM143Q96AN5 459 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 ZNF274Q96GC6 653 aaPredicted RBP10.15□□□□□ -0.78
CPSF4-211ENST00000471455 LXNQ9BS40 222 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 ZSWIM4Q9H7M6 989 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 RXFP1Q9HBX9 757 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 MARCH5Q9NX47 278 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.15□□□□□ -0.78
CPSF4-211ENST00000471455 VAV3Q9UKW4 847 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 GIT1Q9Y2X7 761 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 IPPQ9Y573 584 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 CYP46A1Q9Y6A2 500 aa10.15□□□□□ -0.78
CPSF4-211ENST00000471455 ZFP37Q9Y6Q3 630 aaPredicted RBP10.15□□□□□ -0.78
CPSF4-211ENST00000471455 USP34Q70CQ2 3546 aa10.15□□□□□ -0.79
CPSF4-211ENST00000471455 ARL5CA6NH57 179 aa10.14□□□□□ -0.79
CPSF4-211ENST00000471455 INO80B-WBP1J3KQ70 363 aa10.14□□□□□ -0.79
CPSF4-211ENST00000471455 M0R2N6 131 aa10.14□□□□□ -0.79
CPSF4-211ENST00000471455 NRG2O14511 850 aaPredicted RBP10.14□□□□□ -0.79
CPSF4-211ENST00000471455 SLC37A4O43826 429 aa10.14□□□□□ -0.79
CPSF4-211ENST00000471455 B4GALT3O60512 393 aa10.14□□□□□ -0.79
CPSF4-211ENST00000471455 LMNAP02545 664 aaKnown RBP10.14□□□□□ -0.79
CPSF4-211ENST00000471455 HOXA11P31270 313 aaPredicted RBP10.14□□□□□ -0.79
CPSF4-211ENST00000471455 MLH1P40692 756 aa10.14□□□□□ -0.79
CPSF4-211ENST00000471455 POU5F1BQ06416 359 aa10.14□□□□□ -0.79
CPSF4-211ENST00000471455 USP41Q3LFD5 358 aa10.14□□□□□ -0.79
CPSF4-211ENST00000471455 XKR9Q5GH70 373 aa10.14□□□□□ -0.79
CPSF4-211ENST00000471455 UBXN11Q5T124 520 aa10.14□□□□□ -0.79
CPSF4-211ENST00000471455 RUFY3Q7L099 469 aa10.14□□□□□ -0.79
CPSF4-211ENST00000471455 SHDQ96IW2 340 aa10.14□□□□□ -0.79
CPSF4-211ENST00000471455 GAD1Q99259 594 aa10.14□□□□□ -0.79
CPSF4-211ENST00000471455 CSRNP2Q9H175 543 aa10.14□□□□□ -0.79
CPSF4-211ENST00000471455 TBC1D17Q9HA65 648 aa10.14□□□□□ -0.79
CPSF4-211ENST00000471455 KCNMB3Q9NPA1 279 aa10.14□□□□□ -0.79
CPSF4-211ENST00000471455 ARHGEF3Q9NR81 526 aa10.14□□□□□ -0.79
CPSF4-211ENST00000471455 C2orf16Q68DN1 1984 aa10.14□□□□□ -0.79
CPSF4-211ENST00000471455 CACNA1AO00555 2505 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms