RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 RINT1Q6NUQ1 792 aa16.92■□□□□ 0.3
COL1A1-203ENST00000471344 GLYCTKQ8IVS8 523 aa16.92■□□□□ 0.3
COL1A1-203ENST00000471344 CEP120Q8N960 986 aa16.92■□□□□ 0.3
COL1A1-203ENST00000471344 LRRC15Q8TF66 581 aa16.92■□□□□ 0.3
COL1A1-203ENST00000471344 MAN1C1Q9NR34 630 aa16.92■□□□□ 0.3
COL1A1-203ENST00000471344 ADAM28Q9UKQ2 775 aa16.92■□□□□ 0.3
COL1A1-203ENST00000471344 ZNF318Q5VUA4 2279 aa16.91■□□□□ 0.3
COL1A1-203ENST00000471344 TRIP11Q15643 1979 aa16.91■□□□□ 0.3
COL1A1-203ENST00000471344 TMEM221A6NGB7 291 aa16.91■□□□□ 0.3
COL1A1-203ENST00000471344 SFI1A8K8P3 1242 aa16.91■□□□□ 0.3
COL1A1-203ENST00000471344 M0R296 226 aa16.91■□□□□ 0.3
COL1A1-203ENST00000471344 SPATA31D3P0C874 917 aa16.91■□□□□ 0.3
COL1A1-203ENST00000471344 MTHFRP42898 656 aa16.91■□□□□ 0.3
COL1A1-203ENST00000471344 DSG1Q02413 1049 aa16.91■□□□□ 0.3
COL1A1-203ENST00000471344 HSP90AA2PQ14568 343 aaPredicted RBP16.91■□□□□ 0.3
COL1A1-203ENST00000471344 PTPN21Q16825 1174 aa16.91■□□□□ 0.3
COL1A1-203ENST00000471344 GLRA4Q5JXX5 417 aa16.91■□□□□ 0.3
COL1A1-203ENST00000471344 TRIM67Q6ZTA4 783 aa16.91■□□□□ 0.3
COL1A1-203ENST00000471344 SPATA31D4Q6ZUB0 917 aa16.91■□□□□ 0.3
COL1A1-203ENST00000471344 C1orf186Q6ZWK4 172 aa16.91■□□□□ 0.3
COL1A1-203ENST00000471344 PPFIBP1Q86W92 1011 aa16.91■□□□□ 0.3
COL1A1-203ENST00000471344 RIPOR3Q96MK2 946 aa16.91■□□□□ 0.3
COL1A1-203ENST00000471344 COLEC11Q9BWP8 271 aa16.91■□□□□ 0.3
COL1A1-203ENST00000471344 SFXN1Q9H9B4 322 aa16.91■□□□□ 0.3
COL1A1-203ENST00000471344 CHST7Q9NS84 486 aa16.91■□□□□ 0.3
COL1A1-203ENST00000471344 VWA8A3KMH1 1905 aa16.9■□□□□ 0.3
COL1A1-203ENST00000471344 NPHP3-ACAD11A0A0J9YXS1 232 aa16.9■□□□□ 0.3
COL1A1-203ENST00000471344 SPDYE4A6NLX3 237 aa16.9■□□□□ 0.3
COL1A1-203ENST00000471344 RFPL2O75678 378 aa16.9■□□□□ 0.3
COL1A1-203ENST00000471344 ASGR2P07307 311 aa16.9■□□□□ 0.3
COL1A1-203ENST00000471344 EFNA5P52803 228 aa16.9■□□□□ 0.3
COL1A1-203ENST00000471344 CACNB1Q02641 598 aaPredicted RBP16.9■□□□□ 0.3
COL1A1-203ENST00000471344 GRIN1Q05586 938 aa16.9■□□□□ 0.3
COL1A1-203ENST00000471344 TUSC3Q13454 348 aa16.9■□□□□ 0.3
COL1A1-203ENST00000471344 RTP2Q5QGT7 225 aa16.9■□□□□ 0.3
COL1A1-203ENST00000471344 HYIQ5T013 277 aa16.9■□□□□ 0.3
COL1A1-203ENST00000471344 PRSS55Q6UWB4 352 aaPredicted RBP16.9■□□□□ 0.3
COL1A1-203ENST00000471344 RIN2Q8WYP3 895 aaPredicted RBP16.9■□□□□ 0.3
COL1A1-203ENST00000471344 FAM122AQ96E09 287 aa16.9■□□□□ 0.3
COL1A1-203ENST00000471344 NECTIN4Q96NY8 510 aa16.9■□□□□ 0.3
COL1A1-203ENST00000471344 ADPGKQ9BRR6 497 aa16.9■□□□□ 0.3
COL1A1-203ENST00000471344 CDT1Q9H211 546 aa16.9■□□□□ 0.3
COL1A1-203ENST00000471344 RXFP1Q9HBX9 757 aa16.9■□□□□ 0.3
COL1A1-203ENST00000471344 ARHGAP28Q9P2N2 729 aa16.9■□□□□ 0.3
COL1A1-203ENST00000471344 STK39Q9UEW8 545 aa16.9■□□□□ 0.3
COL1A1-203ENST00000471344 NR2E1Q9Y466 385 aa16.9■□□□□ 0.3
COL1A1-203ENST00000471344 PHLPP2Q6ZVD8 1323 aa16.9■□□□□ 0.3
COL1A1-203ENST00000471344 K7ERI5 159 aa16.89■□□□□ 0.29
COL1A1-203ENST00000471344 SLC16A4O15374 487 aa16.89■□□□□ 0.29
COL1A1-203ENST00000471344 NR1I2O75469 434 aa16.89■□□□□ 0.29
COL1A1-203ENST00000471344 THP07101 528 aa16.89■□□□□ 0.29
COL1A1-203ENST00000471344 MCM2P49736 904 aa16.89■□□□□ 0.29
COL1A1-203ENST00000471344 OSTNP61366 133 aa16.89■□□□□ 0.29
COL1A1-203ENST00000471344 DCAF4L1Q3SXM0 396 aa16.89■□□□□ 0.29
COL1A1-203ENST00000471344 TMEM119Q4V9L6 283 aa16.89■□□□□ 0.29
COL1A1-203ENST00000471344 LARP1BQ659C4 914 aaKnown RBP16.89■□□□□ 0.29
COL1A1-203ENST00000471344 GPR149Q86SP6 731 aa16.89■□□□□ 0.29
COL1A1-203ENST00000471344 PALB2Q86YC2 1186 aa16.89■□□□□ 0.29
COL1A1-203ENST00000471344 KREMEN2Q8NCW0 462 aa16.89■□□□□ 0.29
COL1A1-203ENST00000471344 ASIC4Q96FT7 647 aa16.89■□□□□ 0.29
COL1A1-203ENST00000471344 ACO2Q99798 780 aaKnown RBP16.89■□□□□ 0.29
COL1A1-203ENST00000471344 TARS2Q9BW92 718 aaKnown RBP16.89■□□□□ 0.29
COL1A1-203ENST00000471344 GOLGA2P5Q9HBQ8 144 aa16.89■□□□□ 0.29
COL1A1-203ENST00000471344 KMT5AQ9NQR1 393 aa16.89■□□□□ 0.29
COL1A1-203ENST00000471344 STK24Q9Y6E0 443 aa16.89■□□□□ 0.29
COL1A1-203ENST00000471344 MYH11P35749 1972 aa16.89■□□□□ 0.29
COL1A1-203ENST00000471344 KMT2EQ8IZD2 1858 aa16.88■□□□□ 0.29
COL1A1-203ENST00000471344 ABLIM1O14639 778 aa16.88■□□□□ 0.29
COL1A1-203ENST00000471344 MEFVO15553 781 aaPredicted RBP16.88■□□□□ 0.29
COL1A1-203ENST00000471344 TADA2AO75478 443 aa16.88■□□□□ 0.29
COL1A1-203ENST00000471344 GLUD1P00367 558 aa16.88■□□□□ 0.29
COL1A1-203ENST00000471344 ADH1AP07327 375 aa16.88■□□□□ 0.29
COL1A1-203ENST00000471344 SLC12A3P55017 1021 aa16.88■□□□□ 0.29
COL1A1-203ENST00000471344 DMP1Q13316 513 aaPredicted RBP16.88■□□□□ 0.29
COL1A1-203ENST00000471344 USP41Q3LFD5 358 aa16.88■□□□□ 0.29
COL1A1-203ENST00000471344 ATAT1Q5SQI0 421 aa16.88■□□□□ 0.29
COL1A1-203ENST00000471344 ZBTB33Q86T24 672 aa16.88■□□□□ 0.29
COL1A1-203ENST00000471344 TDRD5Q8NAT2 981 aaKnown RBP16.88■□□□□ 0.29
COL1A1-203ENST00000471344 DRC1Q96MC2 740 aa16.88■□□□□ 0.29
COL1A1-203ENST00000471344 PPP1R10Q96QC0 940 aaKnown RBP16.88■□□□□ 0.29
COL1A1-203ENST00000471344 PTPRHQ9HD43 1115 aa16.88■□□□□ 0.29
COL1A1-203ENST00000471344 TNFSF13BQ9Y275 285 aa16.88■□□□□ 0.29
COL1A1-203ENST00000471344 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.88■□□□□ 0.29
COL1A1-203ENST00000471344 MYO10Q9HD67 2058 aa16.87■□□□□ 0.29
COL1A1-203ENST00000471344 ADAM12O43184 909 aa16.87■□□□□ 0.29
COL1A1-203ENST00000471344 TGM5O43548 720 aa16.87■□□□□ 0.29
COL1A1-203ENST00000471344 N4BP1O75113 896 aaKnown RBP16.87■□□□□ 0.29
COL1A1-203ENST00000471344 BRD1O95696 1058 aa16.87■□□□□ 0.29
COL1A1-203ENST00000471344 PDGFBP01127 241 aaPredicted RBP16.87■□□□□ 0.29
COL1A1-203ENST00000471344 PLA2G4BP0C869 781 aa16.87■□□□□ 0.29
COL1A1-203ENST00000471344 GUCY2CP25092 1073 aa16.87■□□□□ 0.29
COL1A1-203ENST00000471344 SOX4Q06945 474 aaPredicted RBP16.87■□□□□ 0.29
COL1A1-203ENST00000471344 SIGLEC14Q08ET2 396 aa16.87■□□□□ 0.29
COL1A1-203ENST00000471344 CUL4AQ13619 759 aa16.87■□□□□ 0.29
COL1A1-203ENST00000471344 ZNF568Q3ZCX4 644 aa16.87■□□□□ 0.29
COL1A1-203ENST00000471344 ARSHQ5FYA8 562 aa16.87■□□□□ 0.29
COL1A1-203ENST00000471344 TMEM130Q8N3G9 435 aa16.87■□□□□ 0.29
COL1A1-203ENST00000471344 SYT2Q8N9I0 419 aaPredicted RBP16.87■□□□□ 0.29
COL1A1-203ENST00000471344 C3orf58Q8NDZ4 430 aa16.87■□□□□ 0.29
COL1A1-203ENST00000471344 PBXIP1Q96AQ6 731 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms