RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 DEPTORQ8TB45 409 aa18.99■□□□□ 0.63
HSPG2-208ENST00000471322 CAGE1Q8TC20 777 aa18.99■□□□□ 0.63
HSPG2-208ENST00000471322 DNAJB3Q8WWF6 145 aa18.99■□□□□ 0.63
HSPG2-208ENST00000471322 PRO3102Q9H379 93 aa18.99■□□□□ 0.63
HSPG2-208ENST00000471322 NHEJ1Q9H9Q4 299 aaPredicted RBP18.99■□□□□ 0.63
HSPG2-208ENST00000471322 RRN3P2A6NIE6 340 aa18.98■□□□□ 0.63
HSPG2-208ENST00000471322 PITPNM1O00562 1244 aa18.98■□□□□ 0.63
HSPG2-208ENST00000471322 KIAA0391O15091 583 aaKnown RBP18.98■□□□□ 0.63
HSPG2-208ENST00000471322 P4HA2O15460 535 aa18.98■□□□□ 0.63
HSPG2-208ENST00000471322 GARTP22102 1010 aa18.98■□□□□ 0.63
HSPG2-208ENST00000471322 PON1P27169 355 aa18.98■□□□□ 0.63
HSPG2-208ENST00000471322 POLR2FP61218 127 aaKnown RBP18.98■□□□□ 0.63
HSPG2-208ENST00000471322 ENPEPQ07075 957 aa18.98■□□□□ 0.63
HSPG2-208ENST00000471322 TMEM62Q0P6H9 643 aa18.98■□□□□ 0.63
HSPG2-208ENST00000471322 CETN1Q12798 172 aa18.98■□□□□ 0.63
HSPG2-208ENST00000471322 LRRC8DQ7L1W4 858 aa18.98■□□□□ 0.63
HSPG2-208ENST00000471322 USP37Q86T82 979 aa18.98■□□□□ 0.63
HSPG2-208ENST00000471322 ZNF592Q92610 1267 aa18.98■□□□□ 0.63
HSPG2-208ENST00000471322 TMEM143Q96AN5 459 aa18.98■□□□□ 0.63
HSPG2-208ENST00000471322 CCDC42Q96M95 316 aa18.98■□□□□ 0.63
HSPG2-208ENST00000471322 CBWD1Q9BRT8 395 aa18.98■□□□□ 0.63
HSPG2-208ENST00000471322 MYH11P35749 1972 aa18.98■□□□□ 0.63
HSPG2-208ENST00000471322 WDR81Q562E7 1941 aa18.98■□□□□ 0.63
HSPG2-208ENST00000471322 MBLAC1A4D2B0 266 aaPredicted RBP18.97■□□□□ 0.63
HSPG2-208ENST00000471322 LRRC53A6NM62 1247 aa18.97■□□□□ 0.63
HSPG2-208ENST00000471322 EIF3CLB5ME19 914 aaKnown RBP18.97■□□□□ 0.63
HSPG2-208ENST00000471322 SELPP16109 830 aa18.97■□□□□ 0.63
HSPG2-208ENST00000471322 FMO5P49326 533 aa18.97■□□□□ 0.63
HSPG2-208ENST00000471322 SHHQ15465 462 aa18.97■□□□□ 0.63
HSPG2-208ENST00000471322 KLHDC7AQ5VTJ3 777 aa18.97■□□□□ 0.63
HSPG2-208ENST00000471322 SFMBT2Q5VUG0 894 aa18.97■□□□□ 0.63
HSPG2-208ENST00000471322 MTHFD1LQ6UB35 978 aa18.97■□□□□ 0.63
HSPG2-208ENST00000471322 EIF3CQ99613 913 aaKnown RBP18.97■□□□□ 0.63
HSPG2-208ENST00000471322 KIFC3Q9BVG8 833 aa18.97■□□□□ 0.63
HSPG2-208ENST00000471322 OSBPL7Q9BZF2 842 aa18.97■□□□□ 0.63
HSPG2-208ENST00000471322 GANQ9H2C0 597 aa18.97■□□□□ 0.63
HSPG2-208ENST00000471322 PCIF1Q9H4Z3 704 aa18.97■□□□□ 0.63
HSPG2-208ENST00000471322 TMEM134Q9H6X4 195 aa18.97■□□□□ 0.63
HSPG2-208ENST00000471322 SCN5AQ14524 2016 aa18.97■□□□□ 0.63
HSPG2-208ENST00000471322 PHLPP2Q6ZVD8 1323 aa18.97■□□□□ 0.63
HSPG2-208ENST00000471322 GLRA2P23416 452 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 VAMP7P51809 220 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 PPIGQ13427 754 aaKnown RBP eCLIP18.96■□□□□ 0.636e-6■□□□□ 9.4
HSPG2-208ENST00000471322 MXD4Q14582 209 aaPredicted RBP18.96■□□□□ 0.63
HSPG2-208ENST00000471322 TRIM65Q6PJ69 517 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 TRAF7Q6Q0C0 670 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 ZNF662Q6ZS27 426 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 FMNL3Q8IVF7 1028 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 METTL13Q8N6R0 699 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 VWCEQ96DN2 955 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 BICD1Q96G01 975 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 PPP1R16BQ96T49 567 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.96■□□□□ 0.63
HSPG2-208ENST00000471322 KIAA1586Q9HCI6 787 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 GCNT4Q9P109 453 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 SSU72P8A0A1W2PR75 194 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 K7ERI5 159 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 HNRNPDLO14979 420 aaKnown RBP18.96■□□□□ 0.63
HSPG2-208ENST00000471322 PMM2O15305 246 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 SERPING1P05155 500 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 UCHL3P15374 230 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 SLC9A1P19634 815 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 BMP8BP34820 402 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 EFNA5P52803 228 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 MBTPS1Q14703 1052 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 GPNMBQ14956 572 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 SPA17Q15506 151 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 ARHGAP29Q52LW3 1261 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 ZNF484Q5JVG2 852 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 SLFN12LQ6IEE8 588 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 SYT10Q6XYQ8 523 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 ZNF365Q70YC5 407 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 OTOP2Q7RTS6 562 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 RDH13Q8NBN7 331 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 ASAP3Q8TDY4 903 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 NLRC4Q9NPP4 1024 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 AIPL1Q9NZN9 384 aa18.96■□□□□ 0.63
HSPG2-208ENST00000471322 ADGRA3Q8IWK6 1321 aa18.95■□□□□ 0.62
HSPG2-208ENST00000471322 IGKV6-21A0A0C4DH24 114 aa18.95■□□□□ 0.62
HSPG2-208ENST00000471322 LRRIQ4A6NIV6 560 aa18.95■□□□□ 0.62
HSPG2-208ENST00000471322 ANKRD63C9JTQ0 380 aa18.95■□□□□ 0.62
HSPG2-208ENST00000471322 KIF5CO60282 957 aa18.95■□□□□ 0.62
HSPG2-208ENST00000471322 C22orf31O95567 290 aa18.95■□□□□ 0.62
HSPG2-208ENST00000471322 PIGRP01833 764 aa18.95■□□□□ 0.62
HSPG2-208ENST00000471322 ADSSP30520 456 aa18.95■□□□□ 0.62
HSPG2-208ENST00000471322 MAPK8IP2Q13387 824 aaPredicted RBP18.95■□□□□ 0.62
HSPG2-208ENST00000471322 DPY19L2P1Q6NXN4 242 aa18.95■□□□□ 0.62
HSPG2-208ENST00000471322 TAF2Q6P1X5 1199 aa18.95■□□□□ 0.62
HSPG2-208ENST00000471322 TDHQ8IZJ6 230 aa18.95■□□□□ 0.62
HSPG2-208ENST00000471322 TXLNBQ8N3L3 684 aa18.95■□□□□ 0.62
HSPG2-208ENST00000471322 LRRC71Q8N4P6 559 aa18.95■□□□□ 0.62
HSPG2-208ENST00000471322 ACRBPQ8NEB7 543 aa18.95■□□□□ 0.62
HSPG2-208ENST00000471322 MYRIPQ8NFW9 859 aa18.95■□□□□ 0.62
HSPG2-208ENST00000471322 POMGNT1Q8WZA1 660 aa18.95■□□□□ 0.62
HSPG2-208ENST00000471322 FBXL18Q96ME1 805 aa18.95■□□□□ 0.62
HSPG2-208ENST00000471322 DEF6Q9H4E7 631 aa18.95■□□□□ 0.62
HSPG2-208ENST00000471322 IL23AQ9NPF7 189 aa18.95■□□□□ 0.62
HSPG2-208ENST00000471322 MYO1AQ9UBC5 1043 aa18.95■□□□□ 0.62
HSPG2-208ENST00000471322 BZW2Q9Y6E2 419 aaKnown RBP18.95■□□□□ 0.62
HSPG2-208ENST00000471322 TET1Q8NFU7 2136 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms