RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 KRT83P78385 493 aa10.17□□□□□ -0.78
VPS52-216ENST00000471309 TRIM32Q13049 653 aa10.17□□□□□ -0.78
VPS52-216ENST00000471309 PCBP1Q15365 356 aaKnown RBP eCLIP10.17□□□□□ -0.78
VPS52-216ENST00000471309 ASIC2Q16515 512 aa10.17□□□□□ -0.78
VPS52-216ENST00000471309 DNTTIP2Q5QJE6 756 aaKnown RBP10.17□□□□□ -0.78
VPS52-216ENST00000471309 ZBTB41Q5SVQ8 909 aa10.17□□□□□ -0.78
VPS52-216ENST00000471309 MAP3K21Q5TCX8 1036 aa10.17□□□□□ -0.78
VPS52-216ENST00000471309 TNS4Q8IZW8 715 aa10.17□□□□□ -0.78
VPS52-216ENST00000471309 ZNF710Q8N1W2 664 aa10.17□□□□□ -0.78
VPS52-216ENST00000471309 ACRBPQ8NEB7 543 aa10.17□□□□□ -0.78
VPS52-216ENST00000471309 FBXL13Q8NEE6 735 aa10.17□□□□□ -0.78
VPS52-216ENST00000471309 ERO1AQ96HE7 468 aa10.17□□□□□ -0.78
VPS52-216ENST00000471309 CCDC42Q96M95 316 aa10.17□□□□□ -0.78
VPS52-216ENST00000471309 CGRRF1Q99675 332 aa10.17□□□□□ -0.78
VPS52-216ENST00000471309 STK33Q9BYT3 514 aa10.17□□□□□ -0.78
VPS52-216ENST00000471309 RNF39Q9H2S5 420 aa10.17□□□□□ -0.78
VPS52-216ENST00000471309 XPNPEP3Q9NQH7 507 aa10.17□□□□□ -0.78
VPS52-216ENST00000471309 AJAP1Q9UKB5 411 aaPredicted RBP10.17□□□□□ -0.78
VPS52-216ENST00000471309 CPSF3Q9UKF6 684 aaKnown RBP10.17□□□□□ -0.78
VPS52-216ENST00000471309 EVPLQ92817 2033 aa10.17□□□□□ -0.78
VPS52-216ENST00000471309 SCN10AQ9Y5Y9 1956 aa10.17□□□□□ -0.78
VPS52-216ENST00000471309 C17orf102A2RUQ5 167 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 RBAK-RBAKDNI3L0D1 243 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 TSPAN1O60635 241 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 ZC3H11AO75152 810 aaKnown RBP eCLIP10.16□□□□□ -0.78
VPS52-216ENST00000471309 IQCF3P0C7M6 154 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 DLATP10515 647 aaKnown RBP10.16□□□□□ -0.78
VPS52-216ENST00000471309 MCF2P10911 925 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 TNNT1P13805 278 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 ELNP15502 786 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 FERP16591 822 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 CCND3P30281 292 aaPredicted RBP10.16□□□□□ -0.78
VPS52-216ENST00000471309 PRKCIP41743 596 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 STAT1P42224 750 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 KIF11P52732 1056 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 AP3M2P53677 418 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 PRMT2P55345 433 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 POU5F1Q01860 360 aaKnown RBP10.16□□□□□ -0.78
VPS52-216ENST00000471309 MAP2K1Q02750 393 aaPredicted RBP10.16□□□□□ -0.78
VPS52-216ENST00000471309 HIC1Q14526 733 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 ARHGEF6Q15052 776 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 SURF1Q15526 300 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 KYAT1Q16773 422 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 ASTE1Q2TB18 679 aaPredicted RBP10.16□□□□□ -0.78
VPS52-216ENST00000471309 GNASQ5JWF2 1037 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 GJB7Q6PEY0 223 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 RUFY4Q6ZNE9 571 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 ZNF662Q6ZS27 426 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 SV2AQ7L0J3 742 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 ZBTB33Q86T24 672 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 WDR49Q8IV35 697 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 C7orf31Q8N865 590 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 TAS1R2Q8TE23 839 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 ZNF668Q96K58 619 aaPredicted RBP10.16□□□□□ -0.78
VPS52-216ENST00000471309 SCLT1Q96NL6 688 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 FNBP1Q96RU3 617 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 TCHPQ9BT92 498 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 FAM49AQ9H0Q0 323 aaPredicted RBP10.16□□□□□ -0.78
VPS52-216ENST00000471309 CDT1Q9H211 546 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 ADAMTS10Q9H324 1103 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 PDZD7Q9H5P4 517 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 TOPORSQ9NS56 1045 aaPredicted RBP10.16□□□□□ -0.78
VPS52-216ENST00000471309 DNAJC12Q9UKB3 198 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 REXO2Q9Y3B8 237 aaKnown RBP10.16□□□□□ -0.78
VPS52-216ENST00000471309 BZW2Q9Y6E2 419 aaKnown RBP10.16□□□□□ -0.78
VPS52-216ENST00000471309 RALGAPA2Q2PPJ7 1873 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 KAT6AQ92794 2004 aa10.16□□□□□ -0.78
VPS52-216ENST00000471309 ANK1P16157 1881 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 PTPRJQ12913 1337 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 AKR1B10O60218 316 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 FKTNO75072 461 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 GPR32O75388 356 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 ERLIN2O94905 339 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 PGK1P00558 417 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 C4BPAP04003 597 aaKnown RBP10.15□□□□□ -0.78
VPS52-216ENST00000471309 PLEKP08567 350 aaPredicted RBP10.15□□□□□ -0.78
VPS52-216ENST00000471309 CCDC172P0C7W6 258 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 HARSP12081 509 aaKnown RBP10.15□□□□□ -0.78
VPS52-216ENST00000471309 SOX5P35711 763 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 EIF4A3P38919 411 aaKnown RBP10.15□□□□□ -0.78
VPS52-216ENST00000471309 WNT7BP56706 349 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 CHMP4BP1P59074 171 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 SPA17Q15506 151 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 TMEM132AQ24JP5 1023 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 KIZQ2M2Z5 673 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 ZACNQ401N2 412 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 TDRD12Q587J7 1177 aaKnown RBP10.15□□□□□ -0.78
VPS52-216ENST00000471309 EEF1DP3Q658K8 133 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 PHLDB3Q6NSJ2 640 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 TAF2Q6P1X5 1199 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 IRF2BP2Q7Z5L9 587 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 SESTD1Q86VW0 696 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 ARHGEF19Q8IW93 802 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 KLHDC9Q8NEP7 349 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 RAET1EQ8TD07 263 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 FAM81BQ96LP2 452 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 PPP1R16BQ96T49 567 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 POP1Q99575 1024 aaKnown RBP10.15□□□□□ -0.78
VPS52-216ENST00000471309 GCOM2Q9BZD3 368 aaPredicted RBP10.15□□□□□ -0.78
VPS52-216ENST00000471309 GPR88Q9GZN0 384 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms