RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 ZC2HC1CQ53FD0 456 aaPredicted RBP16.62■□□□□ 0.25
ABCF3-208ENST00000471226 HERC4Q5GLZ8 1057 aaPredicted RBP16.62■□□□□ 0.25
ABCF3-208ENST00000471226 ZBTB33Q86T24 672 aa16.62■□□□□ 0.25
ABCF3-208ENST00000471226 TMEM173Q86WV6 379 aaPredicted RBP16.62■□□□□ 0.25
ABCF3-208ENST00000471226 CCDC65Q8IXS2 484 aa16.62■□□□□ 0.25
ABCF3-208ENST00000471226 HVCN1Q96D96 273 aa16.62■□□□□ 0.25
ABCF3-208ENST00000471226 HAPLN2Q9GZV7 340 aa16.62■□□□□ 0.25
ABCF3-208ENST00000471226 CXCL16Q9H2A7 254 aa16.62■□□□□ 0.25
ABCF3-208ENST00000471226 GDPD2Q9HCC8 539 aa16.62■□□□□ 0.25
ABCF3-208ENST00000471226 GDAQ9Y2T3 454 aa16.62■□□□□ 0.25
ABCF3-208ENST00000471226 ANK1P16157 1881 aa16.62■□□□□ 0.25
ABCF3-208ENST00000471226 PTGESO14684 152 aa16.61■□□□□ 0.25
ABCF3-208ENST00000471226 NRP1O14786 923 aa16.61■□□□□ 0.25
ABCF3-208ENST00000471226 FSCN2O14926 492 aa16.61■□□□□ 0.25
ABCF3-208ENST00000471226 CLDN3O15551 220 aa16.61■□□□□ 0.25
ABCF3-208ENST00000471226 ACTN4O43707 911 aaKnown RBP16.61■□□□□ 0.25
ABCF3-208ENST00000471226 SLFN14P0C7P3 912 aa16.61■□□□□ 0.25
ABCF3-208ENST00000471226 IRS1P35568 1242 aa16.61■□□□□ 0.25
ABCF3-208ENST00000471226 ANP32AP39687 249 aaKnown RBP16.61■□□□□ 0.25
ABCF3-208ENST00000471226 LIG4P49917 911 aa16.61■□□□□ 0.25
ABCF3-208ENST00000471226 ERVFC1P60507 584 aa16.61■□□□□ 0.25
ABCF3-208ENST00000471226 KRT17Q04695 432 aa16.61■□□□□ 0.25
ABCF3-208ENST00000471226 NOLC1Q14978 699 aaKnown RBP eCLIP16.61■□□□□ 0.25
ABCF3-208ENST00000471226 NAB2Q15742 525 aa16.61■□□□□ 0.25
ABCF3-208ENST00000471226 XKR4Q5GH76 650 aa16.61■□□□□ 0.25
ABCF3-208ENST00000471226 ALKAL1Q6UXT8 129 aa16.61■□□□□ 0.25
ABCF3-208ENST00000471226 BCL7CQ8WUZ0 217 aaPredicted RBP16.61■□□□□ 0.25
ABCF3-208ENST00000471226 TMEM169Q96HH4 297 aa16.61■□□□□ 0.25
ABCF3-208ENST00000471226 IGSF21Q96ID5 467 aa16.61■□□□□ 0.25
ABCF3-208ENST00000471226 RPS6KC1Q96S38 1066 aa16.61■□□□□ 0.25
ABCF3-208ENST00000471226 CCDC94Q9BW85 323 aaPredicted RBP16.61■□□□□ 0.25
ABCF3-208ENST00000471226 MRPL44Q9H9J2 332 aaKnown RBP16.61■□□□□ 0.25
ABCF3-208ENST00000471226 PRDM6Q9NQX0 595 aa16.61■□□□□ 0.25
ABCF3-208ENST00000471226 TLR9Q9NR96 1032 aa16.61■□□□□ 0.25
ABCF3-208ENST00000471226 SERTAD1Q9UHV2 236 aa16.61■□□□□ 0.25
ABCF3-208ENST00000471226 PUF60Q9UHX1 559 aaKnown RBP16.61■□□□□ 0.25
ABCF3-208ENST00000471226 FAN1Q9Y2M0 1017 aa16.61■□□□□ 0.25
ABCF3-208ENST00000471226 HNRNPDLO14979 420 aaKnown RBP16.6■□□□□ 0.25
ABCF3-208ENST00000471226 COASYQ13057 564 aa16.6■□□□□ 0.25
ABCF3-208ENST00000471226 TCEAL5Q5H9L2 206 aa16.6■□□□□ 0.25
ABCF3-208ENST00000471226 PDE12Q6L8Q7 609 aaKnown RBP16.6■□□□□ 0.25
ABCF3-208ENST00000471226 SLC39A4Q6P5W5 647 aa16.6■□□□□ 0.25
ABCF3-208ENST00000471226 BICD1Q96G01 975 aa16.6■□□□□ 0.25
ABCF3-208ENST00000471226 TBC1D7Q9P0N9 293 aa16.6■□□□□ 0.25
ABCF3-208ENST00000471226 ANKFY1Q9P2R3 1169 aa16.6■□□□□ 0.25
ABCF3-208ENST00000471226 USP25Q9UHP3 1055 aa16.6■□□□□ 0.25
ABCF3-208ENST00000471226 ANKRD63C9JTQ0 380 aa16.59■□□□□ 0.25
ABCF3-208ENST00000471226 MEFVO15553 781 aaPredicted RBP16.59■□□□□ 0.25
ABCF3-208ENST00000471226 THP07101 528 aa16.59■□□□□ 0.25
ABCF3-208ENST00000471226 CASP1P29466 404 aa16.59■□□□□ 0.25
ABCF3-208ENST00000471226 AFMP43652 599 aa16.59■□□□□ 0.25
ABCF3-208ENST00000471226 CASP5P51878 434 aa16.59■□□□□ 0.25
ABCF3-208ENST00000471226 NDUFA8P51970 172 aa16.59■□□□□ 0.25
ABCF3-208ENST00000471226 OSTNP61366 133 aa16.59■□□□□ 0.25
ABCF3-208ENST00000471226 ASIC1P78348 528 aa16.59■□□□□ 0.25
ABCF3-208ENST00000471226 EHHADHQ08426 723 aa16.59■□□□□ 0.25
ABCF3-208ENST00000471226 TUSC3Q13454 348 aa16.59■□□□□ 0.25
ABCF3-208ENST00000471226 ALCAMQ13740 583 aa16.59■□□□□ 0.25
ABCF3-208ENST00000471226 COL19A1Q14993 1142 aa16.59■□□□□ 0.25
ABCF3-208ENST00000471226 L1TD1Q5T7N2 865 aaKnown RBP16.59■□□□□ 0.25
ABCF3-208ENST00000471226 UNC13DQ70J99 1090 aa16.59■□□□□ 0.25
ABCF3-208ENST00000471226 DDX53Q86TM3 631 aaKnown RBP16.59■□□□□ 0.25
ABCF3-208ENST00000471226 CEP57L1Q8IYX8 460 aa16.59■□□□□ 0.25
ABCF3-208ENST00000471226 FSIP1Q8NA03 581 aa16.59■□□□□ 0.25
ABCF3-208ENST00000471226 ACAP3Q96P50 834 aa16.59■□□□□ 0.25
ABCF3-208ENST00000471226 VN1R3Q9BXE9 311 aa16.59■□□□□ 0.25
ABCF3-208ENST00000471226 FGFBP2Q9BYJ0 223 aa16.59■□□□□ 0.25
ABCF3-208ENST00000471226 TOPORSQ9NS56 1045 aaPredicted RBP16.59■□□□□ 0.25
ABCF3-208ENST00000471226 MARCH5Q9NX47 278 aa16.59■□□□□ 0.25
ABCF3-208ENST00000471226 PCDHB13Q9Y5F0 798 aa16.59■□□□□ 0.25
ABCF3-208ENST00000471226 PCDHGC5Q9Y5F6 944 aa16.59■□□□□ 0.25
ABCF3-208ENST00000471226 STYXL1Q9Y6J8 313 aa16.59■□□□□ 0.25
ABCF3-208ENST00000471226 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.58■□□□□ 0.24
ABCF3-208ENST00000471226 A0A0B4J269 797 aa16.58■□□□□ 0.24
ABCF3-208ENST00000471226 PVALEFA0A1B0GWK0 134 aa16.58■□□□□ 0.24
ABCF3-208ENST00000471226 FAM189A1O60320 539 aa16.58■□□□□ 0.24
ABCF3-208ENST00000471226 CSPG5O95196 566 aa16.58■□□□□ 0.24
ABCF3-208ENST00000471226 GCNT3O95395 438 aa16.58■□□□□ 0.24
ABCF3-208ENST00000471226 EFEMP2O95967 443 aa16.58■□□□□ 0.24
ABCF3-208ENST00000471226 MYBP10242 640 aa16.58■□□□□ 0.24
ABCF3-208ENST00000471226 HARSP12081 509 aaKnown RBP16.58■□□□□ 0.24
ABCF3-208ENST00000471226 SYKP43405 635 aa16.58■□□□□ 0.24
ABCF3-208ENST00000471226 OR1G1P47890 313 aa16.58■□□□□ 0.24
ABCF3-208ENST00000471226 YARSP54577 528 aaKnown RBP16.58■□□□□ 0.24
ABCF3-208ENST00000471226 KCNA1Q09470 495 aa16.58■□□□□ 0.24
ABCF3-208ENST00000471226 HYAL1Q12794 435 aa16.58■□□□□ 0.24
ABCF3-208ENST00000471226 CUL4BQ13620 913 aa16.58■□□□□ 0.24
ABCF3-208ENST00000471226 ADGRD2Q7Z7M1 963 aa16.58■□□□□ 0.24
ABCF3-208ENST00000471226 PAGE5Q96GU1 130 aa16.58■□□□□ 0.24
ABCF3-208ENST00000471226 SNX27Q96L92 541 aa16.58■□□□□ 0.24
ABCF3-208ENST00000471226 PPP1R10Q96QC0 940 aaKnown RBP16.58■□□□□ 0.24
ABCF3-208ENST00000471226 ACCSQ96QU6 501 aa16.58■□□□□ 0.24
ABCF3-208ENST00000471226 BLZF1Q9H2G9 400 aa16.58■□□□□ 0.24
ABCF3-208ENST00000471226 GOLPH3LQ9H4A5 285 aa16.58■□□□□ 0.24
ABCF3-208ENST00000471226 NGRNQ9NPE2 291 aaKnown RBP16.58■□□□□ 0.24
ABCF3-208ENST00000471226 COG5Q9UP83 839 aa16.58■□□□□ 0.24
ABCF3-208ENST00000471226 UNC80Q8N2C7 3258 aa16.58■□□□□ 0.24
ABCF3-208ENST00000471226 SMIM28A0A1B0GU29 152 aa16.57■□□□□ 0.24
ABCF3-208ENST00000471226 OGTO15294 1046 aa16.57■□□□□ 0.24
ABCF3-208ENST00000471226 NR1I2O75469 434 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms