RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 STAMBPO95630 424 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 PABPC4LP0CB38 370 aaKnown RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 ESRRAP11474 423 aaPredicted RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 ABCB4P21439 1286 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 ADORA1P30542 326 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 CPA2P48052 419 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 ARFIP2P53365 341 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 YARSP54577 528 aaKnown RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 NAA20P61599 178 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 PHEXP78562 749 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 PDE1BQ01064 536 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 MECOMQ03112 1051 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 SULT2A1Q06520 285 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 PPIDQ08752 370 aaKnown RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 DMPKQ09013 629 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 SEPT6Q14141 434 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 MPP2Q14168 576 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 ACAP1Q15027 740 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 ASTE1Q2TB18 679 aaPredicted RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 C1orf141Q5JVX7 400 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 CGB2Q6NT52 195 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 ALKBH5Q6P6C2 394 aaKnown RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 CCDC62Q6P9F0 684 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 C1orf228Q6PIY5 440 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 VSTM1Q6UX27 236 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 BTNL9Q6UXG8 535 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 NLRP9Q7RTR0 991 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 SGMS1Q86VZ5 419 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 CCDC105Q8IYK2 499 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 ZNF654Q8IZM8 581 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 DEPTORQ8TB45 409 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.5□□□□□ -1.69
VPS50-210ENST00000471188 PPP2R3CQ969Q6 453 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 PPP1R14BQ96C90 147 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 DGCR14Q96DF8 476 aaKnown RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 RUNDC3BQ96NL0 473 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 ECSITQ9BQ95 431 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 DRC3Q9H069 523 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 METTL14Q9HCE5 456 aaKnown RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 SEPT11Q9NVA2 429 aaKnown RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 AIPL1Q9NZN9 384 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 STX18Q9P2W9 335 aaKnown RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 ZNF212Q9UDV6 495 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 SERPINA10Q9UK55 444 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 ZNF148Q9UQR1 794 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 MYO5AQ9Y4I1 1855 aaKnown RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 PFASO15067 1338 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 MROH7Q68CQ1 1323 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 SMIM31A0A1B0GVY4 71 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 RASA4BC9J798 803 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 TRAF5O00463 557 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 ZBTB24O43167 697 aaPredicted RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 RASA4O43374 803 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 ECE2O60344 883 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 CIB2O75838 187 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 HAUS5O94927 633 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 RHOBTB3O94955 611 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 GSTT2P0CG29 244 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 GSTT2BP0CG30 244 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 T-ENOLP0DO92 83 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 FDX1P10109 184 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 TAC1P20366 129 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 FOXN2P32314 431 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 PGM1P36871 562 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 IL15P40933 162 aaPredicted RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 LIFRP42702 1097 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 GSTM4Q03013 218 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 KLRC3Q07444 240 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 SCARF1Q14162 830 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 TMED2Q15363 201 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 HSP90AA5PQ58FG0 334 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 FYB2Q5VWT5 728 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 KLHL35Q6PF15 583 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 PPP1R21Q6ZMI0 780 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 CAPN12Q6ZSI9 719 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 EPM2AIP1Q7L775 607 aaPredicted RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 DYMQ7RTS9 669 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 PATL1Q86TB9 770 aaKnown RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 WDR75Q8IWA0 830 aaKnown RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 ZSCAN29Q8IWY8 852 aaPredicted RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 TMCO5AQ8N6Q1 288 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 RAB3IL1Q8TBN0 382 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 C18orf8Q96DM3 657 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 ERLEC1Q96DZ1 483 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 MIPEPQ99797 713 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 MKNK1Q9BUB5 465 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 PLVAPQ9BX97 442 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 TMEM60Q9H2L4 133 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 EBF3Q9H4W6 596 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 TUT1Q9H6E5 874 aaKnown RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 UTP6Q9NYH9 597 aaKnown RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 EURLQ9NYK6 297 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 PTTG2Q9NZH5 202 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 PARP2Q9UGN5 583 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 TMED5Q9Y3A6 229 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 RREB1Q92766 1687 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 UMODL1Q5DID0 1318 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 RPTORQ8N122 1335 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 GSC2O15499 205 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms